DNATCO v4.1: results

NMR solution structures of CAG RNA-DB213 binding complex

Results of the assignment of 95 detected steps in 5 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	7d12-m1_A_G1_C2	AAA	AA00	78	0.25	AA00
02	7d12-m2_A_G1_C2	AAA	AA00	87	0.24	AA00
03	7d12-m3_A_G1_C2	AAA	AA00	64	0.33	AA00
04	7d12-m4_A_G1_C2	AAA	AA00	52	0.31	AA00
05	7d12-m5_A_G1_C2	AAA	AA00	53	0.31	AA00
06	7d12-m1_A_C2_A3	NAN	NANT	0	0.67	AA04
07	7d12-m2_A_C2_A3	NAN	NANT	0	0.55	AA04
08	7d12-m3_A_C2_A3	AAA	AA00	79	0.26	AA00
09	7d12-m4_A_C2_A3	NAN	NANT	0	0.65	AA08
10	7d12-m5_A_C2_A3	AAA	AA08	49	0.49	AA08
11	7d12-m1_A_A3_G4	NAN	NANT	0	0.32	AA10
12	7d12-m2_A_A3_G4	NAN	NANT	0	0.35	AA10
13	7d12-m3_A_A3_G4	NAN	NANT	0	0.39	AA10
14	7d12-m4_A_A3_G4	NAN	NANT	0	0.41	AA10
15	7d12-m5_A_A3_G4	AAw	AA01	57	0.28	AA01
16	7d12-m1_A_G4_C5	AAA	AA00	36	0.35	AA00
17	7d12-m2_A_G4_C5	AAA	AA00	61	0.28	AA00
18	7d12-m3_A_G4_C5	AAA	AA00	61	0.25	AA00
19	7d12-m4_A_G4_C5	AAA	AA08	11	0.28	AA08
20	7d12-m5_A_G4_C5	AAA	AA00	72	0.29	AA00
21	7d12-m1_A_C5_A6	AAA	AA00	84	0.16	AA00
22	7d12-m2_A_C5_A6	AAA	AA00	53	0.22	AA00
23	7d12-m3_A_C5_A6	AAA	AA00	72	0.19	AA00
24	7d12-m4_A_C5_A6	AAA	AA00	86	0.17	AA00
25	7d12-m5_A_C5_A6	AAA	AA00	78	0.27	AA00
26	7d12-m1_A_A6_G7	NAN	NANT	0	0.93	OP08
27	7d12-m2_A_A6_G7	NAN	NANT	0	0.59	AA10
28	7d12-m3_A_A6_G7	NAN	NANT	0	0.96	OP08
29	7d12-m4_A_A6_G7	NAN	NANT	0	0.53	AA10
30	7d12-m5_A_A6_G7	NAN	NANT	0	0.94	OP08
31	7d12-m1_A_G7_C8	AAw	AA11	15	0.38	AA11
32	7d12-m2_A_G7_C8	NAN	NANT	0	0.64	AA11
33	7d12-m3_A_G7_C8	NAN	NANT	0	0.55	AA11
34	7d12-m4_A_G7_C8	NAN	NANT	0	0.55	AA11
35	7d12-m5_A_G7_C8	NAN	NANT	0	0.67	AA11
36	7d12-m1_A_C8_U9	AAA	AA04	23	0.59	AA04
37	7d12-m2_A_C8_U9	AAA	AA00	9	0.55	AA00
38	7d12-m3_A_C8_U9	NAN	NANT	0	0.76	AA00
39	7d12-m4_A_C8_U9	NAN	NANT	0	0.69	AA00
40	7d12-m5_A_C8_U9	AAA	AA04	15	0.67	AA04
41	7d12-m1_A_U9_U10	NAN	NANT	0	0.50	OP09
42	7d12-m2_A_U9_U10	OPN	OP09	35	0.47	OP09
43	7d12-m3_A_U9_U10	OPN	OP09	10	0.61	OP09
44	7d12-m4_A_U9_U10	OPN	OP09	30	0.57	OP09
45	7d12-m5_A_U9_U10	NAN	NANT	0	0.75	OP09
46	7d12-m1_A_U10_C11	OPN	OP20	47	0.48	OP20
47	7d12-m2_A_U10_C11	OPN	OP20	82	0.38	OP20
48	7d12-m3_A_U10_C11	OPN	OP20	77	0.34	OP20
49	7d12-m4_A_U10_C11	OPN	OP20	62	0.42	OP20
50	7d12-m5_A_U10_C11	OPN	OP20	66	0.53	OP20
51	7d12-m1_A_C11_G12	NAN	NANT	0	1.30	OP26
52	7d12-m2_A_C11_G12	NAN	NANT	0	1.35	OP26
53	7d12-m3_A_C11_G12	NAN	NANT	0	1.28	OP26
54	7d12-m4_A_C11_G12	NAN	NANT	0	1.28	OP26
55	7d12-m5_A_C11_G12	NAN	NANT	0	1.36	OP26
56	7d12-m1_A_G12_G13	NAN	NANT	0	0.64	AA05
57	7d12-m2_A_G12_G13	NAN	NANT	0	0.56	AA01
58	7d12-m3_A_G12_G13	NAN	NANT	0	0.55	AA01
59	7d12-m4_A_G12_G13	NAN	NANT	0	0.37	AA01
60	7d12-m5_A_G12_G13	NAN	NANT	0	0.54	AA06
61	7d12-m1_A_G13_C14	NAN	NANT	0	0.73	BA09
62	7d12-m2_A_G13_C14	NAN	NANT	0	0.70	AA10
63	7d12-m3_A_G13_C14	NAN	NANT	0	0.92	BA09
64	7d12-m4_A_G13_C14	NAN	NANT	0	0.71	BA09
65	7d12-m5_A_G13_C14	NAN	NANT	0	0.81	BA09
66	7d12-m1_A_C14_A15	AAA	AA00	21	0.51	AA00
67	7d12-m2_A_C14_A15	AAA	AA04	21	0.59	AA04
68	7d12-m3_A_C14_A15	AAA	AA04	47	0.54	AA04
69	7d12-m4_A_C14_A15	AAA	AA04	24	0.60	AA04
70	7d12-m5_A_C14_A15	AAA	AA00	16	0.46	AA00
71	7d12-m1_A_A15_G16	NAN	NANT	0	0.91	OP08
72	7d12-m2_A_A15_G16	NAN	NANT	0	0.96	OP08
73	7d12-m3_A_A15_G16	NAN	NANT	0	0.97	OP08
74	7d12-m4_A_A15_G16	NAN	NANT	0	0.97	OP08
75	7d12-m5_A_A15_G16	NAN	NANT	0	0.96	OP08
76	7d12-m1_A_G16_C17	AAu	AA12	35	0.52	AA12
77	7d12-m2_A_G16_C17	AAA	AA04	47	0.56	AA04
78	7d12-m3_A_G16_C17	AAA	AA00	15	0.41	AA00
79	7d12-m4_A_G16_C17	AAA	AA08	38	0.37	AA08
80	7d12-m5_A_G16_C17	NAN	NANT	0	0.75	AA04
81	7d12-m1_A_C17_A18	AAA	AA00	69	0.23	AA00
82	7d12-m2_A_C17_A18	AAA	AA00	14	0.51	AA00
83	7d12-m3_A_C17_A18	AAA	AA00	23	0.38	AA00
84	7d12-m4_A_C17_A18	AAA	AA00	70	0.24	AA00
85	7d12-m5_A_C17_A18	AAA	AA00	33	0.41	AA00
86	7d12-m1_A_A18_G19	AAA	AA00	18	0.42	AA00
87	7d12-m2_A_A18_G19	AAA	AA04	57	0.52	AA04
88	7d12-m3_A_A18_G19	AAA	AA00	75	0.24	AA00
89	7d12-m4_A_A18_G19	AAA	AA00	60	0.24	AA00
90	7d12-m5_A_A18_G19	AAA	AA00	54	0.39	AA00
91	7d12-m1_A_G19_C20	AAA	AA00	54	0.33	AA00
92	7d12-m2_A_G19_C20	AAA	AA00	75	0.29	AA00
93	7d12-m3_A_G19_C20	AAA	AA00	63	0.31	AA00
94	7d12-m4_A_G19_C20	AAA	AA00	42	0.34	AA00
95	7d12-m5_A_G19_C20	AAA	AA00	36	0.42	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 95 detected steps in 5 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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