DNATCO v4.1: results

Structure of a GG mismatch-containing duplex formed by G4C2 repeats

Results of the assignment of 200 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	7cuk-m10_A_DC1_DT2	BBB	BB00	80	0.22	BB00
002	7cuk-m1_A_DC1_DT2	BBB	BB00	70	0.29	BB00
003	7cuk-m2_A_DC1_DT2	BBB	BB00	86	0.15	BB00
004	7cuk-m3_A_DC1_DT2	BBB	BB00	76	0.21	BB00
005	7cuk-m4_A_DC1_DT2	BBB	BB00	72	0.20	BB00
006	7cuk-m5_A_DC1_DT2	BBB	BB00	78	0.23	BB00
007	7cuk-m6_A_DC1_DT2	BBB	BB00	79	0.20	BB00
008	7cuk-m7_A_DC1_DT2	BBB	BB00	74	0.24	BB00
009	7cuk-m8_A_DC1_DT2	BBB	BB00	83	0.17	BB00
010	7cuk-m9_A_DC1_DT2	BBB	BB00	73	0.27	BB00
011	7cuk-m10_A_DT2_DA3	BBB	BB00	84	0.21	BB00
012	7cuk-m1_A_DT2_DA3	BBB	BB00	88	0.17	BB00
013	7cuk-m2_A_DT2_DA3	BBB	BB00	76	0.26	BB00
014	7cuk-m3_A_DT2_DA3	BBB	BB00	79	0.22	BB00
015	7cuk-m4_A_DT2_DA3	BBB	BB00	70	0.28	BB00
016	7cuk-m5_A_DT2_DA3	BBB	BB00	77	0.28	BB00
017	7cuk-m6_A_DT2_DA3	BBB	BB00	85	0.21	BB00
018	7cuk-m7_A_DT2_DA3	BBB	BB00	78	0.23	BB00
019	7cuk-m8_A_DT2_DA3	BBB	BB00	76	0.27	BB00
020	7cuk-m9_A_DT2_DA3	BBB	BB00	79	0.25	BB00
021	7cuk-m10_A_DA3_DG4	BBB	BB00	86	0.16	BB00
022	7cuk-m1_A_DA3_DG4	BBB	BB00	81	0.26	BB00
023	7cuk-m2_A_DA3_DG4	BBB	BB00	72	0.30	BB00
024	7cuk-m3_A_DA3_DG4	BBB	BB00	75	0.29	BB00
025	7cuk-m4_A_DA3_DG4	BBB	BB00	76	0.19	BB00
026	7cuk-m5_A_DA3_DG4	BBB	BB00	83	0.15	BB00
027	7cuk-m6_A_DA3_DG4	BBB	BB00	81	0.22	BB00
028	7cuk-m7_A_DA3_DG4	BBB	BB00	72	0.30	BB00
029	7cuk-m8_A_DA3_DG4	BBB	BB00	73	0.30	BB00
030	7cuk-m9_A_DA3_DG4	BBB	BB00	76	0.31	BB00
031	7cuk-m10_A_DG4_DG5	BBB	BB00	75	0.26	BB00
032	7cuk-m1_A_DG4_DG5	BBB	BB00	78	0.28	BB00
033	7cuk-m2_A_DG4_DG5	BBB	BB00	78	0.26	BB00
034	7cuk-m3_A_DG4_DG5	BBB	BB00	81	0.20	BB00
035	7cuk-m4_A_DG4_DG5	BBB	BB00	73	0.23	BB00
036	7cuk-m5_A_DG4_DG5	BBB	BB00	79	0.27	BB00
037	7cuk-m6_A_DG4_DG5	BBB	BB00	76	0.22	BB00
038	7cuk-m7_A_DG4_DG5	BBB	BB00	76	0.22	BB00
039	7cuk-m8_A_DG4_DG5	BBB	BB00	74	0.25	BB00
040	7cuk-m9_A_DG4_DG5	BBB	BB00	73	0.25	BB00
041	7cuk-m10_A_DG5_DG6	BBB	BB00	64	0.29	BB00
042	7cuk-m1_A_DG5_DG6	BBB	BB00	79	0.29	BB00
043	7cuk-m2_A_DG5_DG6	BBB	BB00	78	0.26	BB00
044	7cuk-m3_A_DG5_DG6	BBB	BB00	81	0.18	BB00
045	7cuk-m4_A_DG5_DG6	BBB	BB00	73	0.34	BB00
046	7cuk-m5_A_DG5_DG6	BBB	BB00	74	0.23	BB00
047	7cuk-m6_A_DG5_DG6	BBB	BB00	83	0.23	BB00
048	7cuk-m7_A_DG5_DG6	BBB	BB00	72	0.28	BB00
049	7cuk-m8_A_DG5_DG6	BBB	BB00	48	0.31	BB00
050	7cuk-m9_A_DG5_DG6	BBB	BB00	75	0.29	BB00
051	7cuk-m10_A_DG6_DC7	BBB	BB00	32	0.56	BB00
052	7cuk-m1_A_DG6_DC7	BBB	BB00	80	0.28	BB00
053	7cuk-m2_A_DG6_DC7	BBB	BB00	40	0.57	BB00
054	7cuk-m3_A_DG6_DC7	BBB	BB00	24	0.62	BB00
055	7cuk-m4_A_DG6_DC7	BBB	BB00	74	0.25	BB00
056	7cuk-m5_A_DG6_DC7	BBB	BB00	52	0.51	BB00
057	7cuk-m6_A_DG6_DC7	B12	BB04	59	0.37	BB04
058	7cuk-m7_A_DG6_DC7	BBB	BB00	70	0.36	BB00
059	7cuk-m8_A_DG6_DC7	B12	BB04	49	0.42	BB04
060	7cuk-m9_A_DG6_DC7	BBB	BB00	49	0.56	BB00
061	7cuk-m10_A_DC7_DC8	BBB	BB00	82	0.18	BB00
062	7cuk-m1_A_DC7_DC8	BBB	BB00	72	0.25	BB00
063	7cuk-m2_A_DC7_DC8	BBB	BB00	83	0.18	BB00
064	7cuk-m3_A_DC7_DC8	BBB	BB00	77	0.21	BB00
065	7cuk-m4_A_DC7_DC8	BBB	BB00	87	0.16	BB00
066	7cuk-m5_A_DC7_DC8	BBB	BB00	86	0.15	BB00
067	7cuk-m6_A_DC7_DC8	BBB	BB00	79	0.23	BB00
068	7cuk-m7_A_DC7_DC8	BBB	BB00	69	0.27	BB00
069	7cuk-m8_A_DC7_DC8	BBB	BB00	80	0.18	BB00
070	7cuk-m9_A_DC7_DC8	BBB	BB00	81	0.18	BB00
071	7cuk-m10_A_DC8_DT9	BBB	BB00	84	0.23	BB00
072	7cuk-m1_A_DC8_DT9	BBB	BB00	81	0.23	BB00
073	7cuk-m2_A_DC8_DT9	BBB	BB00	84	0.22	BB00
074	7cuk-m3_A_DC8_DT9	BBB	BB00	76	0.23	BB00
075	7cuk-m4_A_DC8_DT9	BBB	BB00	76	0.31	BB00
076	7cuk-m5_A_DC8_DT9	BBB	BB00	79	0.23	BB00
077	7cuk-m6_A_DC8_DT9	BBB	BB00	59	0.36	BB00
078	7cuk-m7_A_DC8_DT9	BBB	BB00	77	0.24	BB00
079	7cuk-m8_A_DC8_DT9	BBB	BB00	81	0.22	BB00
080	7cuk-m9_A_DC8_DT9	BBB	BB00	85	0.21	BB00
081	7cuk-m10_A_DT9_DA10	BBB	BB00	77	0.23	BB00
082	7cuk-m1_A_DT9_DA10	BBB	BB00	73	0.25	BB00
083	7cuk-m2_A_DT9_DA10	BBB	BB00	79	0.19	BB00
084	7cuk-m3_A_DT9_DA10	BBB	BB00	68	0.30	BB00
085	7cuk-m4_A_DT9_DA10	BBB	BB00	74	0.23	BB00
086	7cuk-m5_A_DT9_DA10	BBB	BB00	63	0.31	BB00
087	7cuk-m6_A_DT9_DA10	BBB	BB00	75	0.26	BB00
088	7cuk-m7_A_DT9_DA10	BBB	BB00	65	0.28	BB00
089	7cuk-m8_A_DT9_DA10	BBB	BB00	69	0.27	BB00
090	7cuk-m9_A_DT9_DA10	BBB	BB00	76	0.26	BB00
091	7cuk-m10_A_DA10_DG11	NAN	NANT	0	0.39	BA05
092	7cuk-m1_A_DA10_DG11	B-A	BA01	7	0.43	BA01
093	7cuk-m2_A_DA10_DG11	NAN	NANT	0	0.42	BA05
094	7cuk-m3_A_DA10_DG11	B-A	BA01	15	0.34	BA01
095	7cuk-m4_A_DA10_DG11	NAN	NANT	0	0.37	BA05
096	7cuk-m5_A_DA10_DG11	NAN	NANT	0	0.41	BA05
097	7cuk-m6_A_DA10_DG11	B-A	BA01	20	0.38	BA01
098	7cuk-m7_A_DA10_DG11	BBB	BB00	67	0.26	BB00
099	7cuk-m8_A_DA10_DG11	BBB	BB00	71	0.29	BB00
100	7cuk-m9_A_DA10_DG11	BBB	BB00	72	0.28	BB00
101	7cuk-m10_B_DC1_DT2	BBB	BB00	82	0.21	BB00
102	7cuk-m1_B_DC1_DT2	BBB	BB00	75	0.26	BB00
103	7cuk-m2_B_DC1_DT2	BBB	BB00	77	0.22	BB00
104	7cuk-m3_B_DC1_DT2	BBB	BB00	77	0.21	BB00
105	7cuk-m4_B_DC1_DT2	BBB	BB00	76	0.22	BB00
106	7cuk-m5_B_DC1_DT2	BBB	BB00	80	0.18	BB00
107	7cuk-m6_B_DC1_DT2	BBB	BB00	70	0.27	BB00
108	7cuk-m7_B_DC1_DT2	BBB	BB00	77	0.22	BB00
109	7cuk-m8_B_DC1_DT2	BBB	BB00	74	0.24	BB00
110	7cuk-m9_B_DC1_DT2	BBB	BB00	75	0.24	BB00
111	7cuk-m10_B_DT2_DA3	BBB	BB00	80	0.23	BB00
112	7cuk-m1_B_DT2_DA3	BBB	BB00	76	0.23	BB00
113	7cuk-m2_B_DT2_DA3	BBB	BB00	79	0.25	BB00
114	7cuk-m3_B_DT2_DA3	BBB	BB00	74	0.26	BB00
115	7cuk-m4_B_DT2_DA3	BBB	BB00	78	0.25	BB00
116	7cuk-m5_B_DT2_DA3	BBB	BB00	80	0.25	BB00
117	7cuk-m6_B_DT2_DA3	BBB	BB00	76	0.25	BB00
118	7cuk-m7_B_DT2_DA3	BBB	BB00	72	0.29	BB00
119	7cuk-m8_B_DT2_DA3	BBB	BB00	85	0.24	BB00
120	7cuk-m9_B_DT2_DA3	BBB	BB00	83	0.22	BB00
121	7cuk-m10_B_DA3_DG4	BBB	BB00	73	0.28	BB00
122	7cuk-m1_B_DA3_DG4	BBB	BB00	80	0.20	BB00
123	7cuk-m2_B_DA3_DG4	BBB	BB00	77	0.22	BB00
124	7cuk-m3_B_DA3_DG4	BBB	BB00	84	0.22	BB00
125	7cuk-m4_B_DA3_DG4	BBB	BB00	84	0.16	BB00
126	7cuk-m5_B_DA3_DG4	BBB	BB00	81	0.23	BB00
127	7cuk-m6_B_DA3_DG4	BBB	BB00	81	0.25	BB00
128	7cuk-m7_B_DA3_DG4	BBB	BB00	83	0.20	BB00
129	7cuk-m8_B_DA3_DG4	BBB	BB00	86	0.20	BB00
130	7cuk-m9_B_DA3_DG4	BBB	BB00	84	0.18	BB00
131	7cuk-m10_B_DG4_DG5	BBB	BB00	87	0.15	BB00
132	7cuk-m1_B_DG4_DG5	BBB	BB00	81	0.22	BB00
133	7cuk-m2_B_DG4_DG5	BBB	BB00	81	0.22	BB00
134	7cuk-m3_B_DG4_DG5	BBB	BB00	87	0.17	BB00
135	7cuk-m4_B_DG4_DG5	BBB	BB00	73	0.31	BB00
136	7cuk-m5_B_DG4_DG5	BBB	BB00	82	0.21	BB00
137	7cuk-m6_B_DG4_DG5	BBB	BB00	90	0.22	BB00
138	7cuk-m7_B_DG4_DG5	BBB	BB00	76	0.23	BB00
139	7cuk-m8_B_DG4_DG5	BBB	BB00	74	0.25	BB00
140	7cuk-m9_B_DG4_DG5	BBB	BB00	76	0.24	BB00
141	7cuk-m10_B_DG5_DG6	NAN	NANT	0	0.63	AB1S
142	7cuk-m1_B_DG5_DG6	NAN	NANT	0	0.60	AB1S
143	7cuk-m2_B_DG5_DG6	NAN	NANT	0	0.49	AB1S
144	7cuk-m3_B_DG5_DG6	NAN	NANT	0	0.51	AB1S
145	7cuk-m4_B_DG5_DG6	NAN	NANT	0	0.44	AB1S
146	7cuk-m5_B_DG5_DG6	NAN	NANT	0	0.43	AB1S
147	7cuk-m6_B_DG5_DG6	NAN	NANT	0	0.44	AB1S
148	7cuk-m7_B_DG5_DG6	NAN	NANT	0	0.66	AB1S
149	7cuk-m8_B_DG5_DG6	NAN	NANT	0	0.61	AB1S
150	7cuk-m9_B_DG5_DG6	NAN	NANT	0	0.46	AB1S
151	7cuk-m10_B_DG6_DC7	SYN	BBS1	19	0.53	BBS1
152	7cuk-m1_B_DG6_DC7	NAN	NANT	0	0.41	BBS1
153	7cuk-m2_B_DG6_DC7	SYN	BBS1	13	0.49	BBS1
154	7cuk-m3_B_DG6_DC7	NAN	NANT	0	0.52	BBS1
155	7cuk-m4_B_DG6_DC7	NAN	NANT	0	0.43	BBS1
156	7cuk-m5_B_DG6_DC7	SYN	BBS1	12	0.49	BBS1
157	7cuk-m6_B_DG6_DC7	SYN	BBS1	10	0.52	BBS1
158	7cuk-m7_B_DG6_DC7	NAN	NANT	0	0.52	BBS1
159	7cuk-m8_B_DG6_DC7	NAN	NANT	0	0.50	BBS1
160	7cuk-m9_B_DG6_DC7	SYN	BBS1	10	0.49	BBS1
161	7cuk-m10_B_DC7_DC8	BBB	BB00	72	0.29	BB00
162	7cuk-m1_B_DC7_DC8	BBB	BB00	75	0.24	BB00
163	7cuk-m2_B_DC7_DC8	BBB	BB00	77	0.26	BB00
164	7cuk-m3_B_DC7_DC8	BBB	BB00	70	0.30	BB00
165	7cuk-m4_B_DC7_DC8	BBB	BB00	79	0.20	BB00
166	7cuk-m5_B_DC7_DC8	BBB	BB00	85	0.18	BB00
167	7cuk-m6_B_DC7_DC8	BBB	BB00	79	0.20	BB00
168	7cuk-m7_B_DC7_DC8	BBB	BB00	68	0.32	BB00
169	7cuk-m8_B_DC7_DC8	BBB	BB00	72	0.27	BB00
170	7cuk-m9_B_DC7_DC8	BBB	BB00	79	0.23	BB00
171	7cuk-m10_B_DC8_DT9	BBB	BB00	71	0.30	BB00
172	7cuk-m1_B_DC8_DT9	BBB	BB00	70	0.31	BB00
173	7cuk-m2_B_DC8_DT9	BBB	BB00	78	0.24	BB00
174	7cuk-m3_B_DC8_DT9	BBB	BB00	76	0.26	BB00
175	7cuk-m4_B_DC8_DT9	BBB	BB00	72	0.27	BB00
176	7cuk-m5_B_DC8_DT9	BBB	BB00	81	0.25	BB00
177	7cuk-m6_B_DC8_DT9	BBB	BB00	71	0.29	BB00
178	7cuk-m7_B_DC8_DT9	BBB	BB00	77	0.28	BB00
179	7cuk-m8_B_DC8_DT9	BBB	BB00	81	0.20	BB00
180	7cuk-m9_B_DC8_DT9	BBB	BB00	83	0.23	BB00
181	7cuk-m10_B_DT9_DA10	BBB	BB00	64	0.29	BB00
182	7cuk-m1_B_DT9_DA10	BBB	BB00	68	0.27	BB00
183	7cuk-m2_B_DT9_DA10	BBB	BB00	72	0.26	BB00
184	7cuk-m3_B_DT9_DA10	BBB	BB00	72	0.26	BB00
185	7cuk-m4_B_DT9_DA10	BBB	BB00	69	0.26	BB00
186	7cuk-m5_B_DT9_DA10	BBB	BB00	75	0.23	BB00
187	7cuk-m6_B_DT9_DA10	BBB	BB00	76	0.21	BB00
188	7cuk-m7_B_DT9_DA10	BBB	BB00	73	0.24	BB00
189	7cuk-m8_B_DT9_DA10	BBB	BB00	70	0.24	BB00
190	7cuk-m9_B_DT9_DA10	BBB	BB00	66	0.30	BB00
191	7cuk-m10_B_DA10_DG11	BBB	BB00	68	0.27	BB00
192	7cuk-m1_B_DA10_DG11	BBB	BB00	66	0.26	BB00
193	7cuk-m2_B_DA10_DG11	B-A	BA01	10	0.35	BA01
194	7cuk-m3_B_DA10_DG11	B-A	BA01	14	0.34	BA01
195	7cuk-m4_B_DA10_DG11	NAN	NANT	0	0.43	BA05
196	7cuk-m5_B_DA10_DG11	NAN	NANT	0	0.39	BA05
197	7cuk-m6_B_DA10_DG11	NAN	NANT	0	0.41	BA05
198	7cuk-m7_B_DA10_DG11	BBB	BB00	68	0.26	BB00
199	7cuk-m8_B_DA10_DG11	B-A	BA01	10	0.36	BA01
200	7cuk-m9_B_DA10_DG11	BBB	BB00	64	0.25	BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Browse conformers

Show

Color by conformation group (pyramids)

Color by NtC (balls)

A

A-B

B-A

B

IC

OPN

Z

N

Results of the assignment of 200 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Download

Restraints

User-based restraints

Definitions

Download the papers

Browse conformers

Show

group
visible