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Conformers: ABBIImiBZICOPNSYNN
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AtaT complexed with acetyl-methionyl-tRNAfMet

Results of the assignment of 144 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0017chd_I_C1_G2NANNANT00.69 OP14
0027chd_I_G2_C3AAAAA00570.19 AA00
0037chd_I_C3_G4AAAAA08880.09 AA08
0047chd_I_G4_G5AAAAA00700.18 AA00
0057chd_I_G5_G6AAAAA08830.19 AA08
0067chd_I_G6_G7A-BAB05270.43 AB05
0077chd_I_G7_4SU8NANNANT01.72 OP16
0087chd_I_4SU8_G9NANNANT01.10 IC03
0097chd_I_G9_G10NANNANT00.92 OP12
0107chd_I_G10_A11AAAAA00560.24 AA00
0117chd_I_A11_G12AAAAA00770.19 AA00
0127chd_I_G12_C13AAwAA01680.21 AA01
0137chd_I_C13_A14AAAAA08280.32 AA08
0147chd_I_A14_G15AAAAA04710.47 AA04
0157chd_I_G15_C16NANNANT01.08 AB04
0167chd_I_C16_C17NANNANT00.75 BA05
0177chd_I_C17_U17.ANANNANT01.59 AB04
0187chd_I_U17.A_G18NANNANT02.46 OP24
0197chd_I_G18_G19NANNANT00.93 IC04
0207chd_I_G19_H2U20NANNANT01.12 OP20
0217chd_I_H2U20_A21NANNANT00.70 OP20
0227chd_I_A21_G22OPNOP15770.25 OP15
0237chd_I_G22_C23AAAAA00570.27 AA00
0247chd_I_C23_U24AAAAA00790.19 AA00
0257chd_I_U24_C25AAwAA01900.13 AA01
0267chd_I_C25_G26AAAAA08640.36 AA08
0277chd_I_G26_U27AAAAA00460.27 AA00
0287chd_I_U27_C28AAAAA08890.19 AA08
0297chd_I_C28_G29AAAAA00720.14 AA00
0307chd_I_G29_G30AAAAA08810.22 AA08
0317chd_I_G30_G31AAAAA00790.18 AA00
0327chd_I_G31_OMC32AAAAA08750.18 AA08
0337chd_I_OMC32_U33AAwAA10700.32 AA10
0347chd_I_U33_C34NANNANT00.62 OP04
0357chd_I_C34_A35AAAAA00590.38 AA00
0367chd_I_A35_U36AAAAA00840.18 AA00
0377chd_I_U36_A37NANNANT01.13 AA12
0387chd_I_A37_A38NANNANT01.97 OP01
0397chd_I_A38_C39AAAAA00200.39 AA00
0407chd_I_C39_C40AAAAA00730.20 AA00
0417chd_I_C40_C41AAAAA00940.17 AA00
0427chd_I_C41_G42AAAAA00790.20 AA00
0437chd_I_G42_A43AAAAA00910.15 AA00
0447chd_I_A43_A44AAAAA08700.26 AA08
0457chd_I_A44_G45AAAAA09760.17 AA09
0467chd_I_G45_A46NANNANT00.49 IC01
0477chd_I_A46_U47NANNANT00.73 IC04
0487chd_I_U47_C48NANNANT01.51 BB14
0497chd_I_C48_G49NANNANT01.89 OP06
0507chd_I_G49_U50AAAAA00770.20 AA00
0517chd_I_U50_C51AAAAA00700.19 AA00
0527chd_I_C51_G52AAAAA03760.28 AA03
0537chd_I_G52_G53AAAAA00800.15 AA00
0547chd_I_G53_5MU54AAAAA00750.18 AA00
0557chd_I_C56_A57AAAAA08710.19 AA08
0567chd_I_A57_A58ICLIC01500.52 IC01
0577chd_I_A58_A59NANNANT00.48 OP25
0587chd_I_A59_U60A-BAB05460.47 AB05
0597chd_I_U60_C61OPNOP12670.26 OP12
0607chd_I_C61_C62AAAAA00850.17 AA00
0617chd_I_C62_G63AAAAA00850.15 AA00
0627chd_I_G63_G64AAAAA00740.20 AA00
0637chd_I_G64_C65AAAAA00650.26 AA00
0647chd_I_C65_C66AAAAA00700.22 AA00
0657chd_I_C66_C67AAAAA00760.17 AA00
0667chd_I_C67_C68AAAAA00880.15 AA00
0677chd_I_C68_C69AAAAA00750.19 AA00
0687chd_I_C69_G70AAAAA00670.13 AA00
0697chd_I_G70_C71AAAAA08880.19 AA08
0707chd_I_C71_A72NANNANT00.42 AA04
0717chd_I_A72_A73AAAAA08670.20 AA08
0727chd_I_A73_C74AAAAA00820.18 AA00
0737chd_J_C1_G2NANNANT00.73 OP14
0747chd_J_G2_C3AAAAA00550.19 AA00
0757chd_J_C3_G4AAAAA08880.08 AA08
0767chd_J_G4_G5AAAAA00720.16 AA00
0777chd_J_G5_G6AAAAA08820.22 AA08
0787chd_J_G6_G7A-BAB05120.46 AB05
0797chd_J_G7_4SU8NANNANT01.73 OP16
0807chd_J_4SU8_G9NANNANT01.15 IC03
0817chd_J_G9_G10NANNANT00.89 OP12
0827chd_J_G10_A11AAAAA00550.24 AA00
0837chd_J_A11_G12AAAAA00780.19 AA00
0847chd_J_G12_C13AAwAA01690.21 AA01
0857chd_J_C13_A14AAAAA08360.30 AA08
0867chd_J_A14_G15AAAAA04690.47 AA04
0877chd_J_G15_C16NANNANT01.23 IC02
0887chd_J_C16_C17NANNANT00.67 BA05
0897chd_J_C17_U17.ANANNANT01.58 AB04
0907chd_J_U17.A_G18NANNANT01.60 OP14
0917chd_J_G18_G19NANNANT00.87 IC04
0927chd_J_G19_H2U20NANNANT01.14 OP20
0937chd_J_H2U20_A21NANNANT00.69 OP20
0947chd_J_A21_G22OPNOP15720.30 OP15
0957chd_J_G22_C23AAAAA00620.26 AA00
0967chd_J_C23_U24AAAAA00790.20 AA00
0977chd_J_U24_C25AAwAA01880.14 AA01
0987chd_J_C25_G26AAAAA08610.39 AA08
0997chd_J_G26_U27AAAAA00350.31 AA00
1007chd_J_U27_C28AAAAA08890.18 AA08
1017chd_J_C28_G29AAAAA00730.11 AA00
1027chd_J_G29_G30AAAAA08840.21 AA08
1037chd_J_G30_G31AAAAA00720.24 AA00
1047chd_J_G31_OMC32AAAAA08720.20 AA08
1057chd_J_OMC32_U33AAwAA10730.31 AA10
1067chd_J_U33_C34NANNANT00.58 OP04
1077chd_J_C34_A35AAAAA00640.24 AA00
1087chd_J_A35_U36AAAAA00840.16 AA00
1097chd_J_U36_A37NANNANT00.99 AA12
1107chd_J_A37_A38NANNANT01.30 AA04
1117chd_J_A38_C39AAAAA00260.32 AA00
1127chd_J_C39_C40AAAAA00730.22 AA00
1137chd_J_C40_C41AAAAA00910.20 AA00
1147chd_J_C41_G42AAAAA00790.18 AA00
1157chd_J_G42_A43AAAAA00910.16 AA00
1167chd_J_A43_A44AAAAA08740.24 AA08
1177chd_J_A44_G45AAAAA09730.19 AA09
1187chd_J_G45_A46NANNANT00.48 IC01
1197chd_J_A46_U47NANNANT00.78 IC04
1207chd_J_U47_C48NANNANT01.60 BB14
1217chd_J_C48_G49NANNANT01.88 OP06
1227chd_J_G49_U50AAAAA00790.20 AA00
1237chd_J_U50_C51AAAAA00700.18 AA00
1247chd_J_C51_G52AAAAA03720.29 AA03
1257chd_J_G52_G53AAAAA00770.22 AA00
1267chd_J_G53_5MU54AAAAA00720.20 AA00
1277chd_J_C56_A57AAAAA04730.27 AA04
1287chd_J_A57_A58NANNANT00.58 IC02
1297chd_J_A58_A59NANNANT00.51 OP25
1307chd_J_A59_U60A-BAB05470.47 AB05
1317chd_J_U60_C61OPNOP12670.24 OP12
1327chd_J_C61_C62AAAAA00740.24 AA00
1337chd_J_C62_G63AAAAA00890.14 AA00
1347chd_J_G63_G64AAAAA00590.23 AA00
1357chd_J_G64_C65AAAAA00650.26 AA00
1367chd_J_C65_C66AAAAA00710.22 AA00
1377chd_J_C66_C67AAAAA00770.16 AA00
1387chd_J_C67_C68AAAAA00770.22 AA00
1397chd_J_C68_C69AAAAA00750.19 AA00
1407chd_J_C69_G70AAAAA00720.13 AA00
1417chd_J_G70_C71AAAAA08890.20 AA08
1427chd_J_C71_A72NANNANT00.42 AA04
1437chd_J_A72_A73AAAAA08630.26 AA08
1447chd_J_A73_C74AAAAA00830.21 AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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