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Conformers: ABBIImiBZICOPNSYNN
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Structure of RIG-I CTD bound to OH-RNA

Results of the assignment of 22 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
017bah_C_G1_A2AAAAA00920.10 AA00
027bah_C_A2_C3AAAAA00760.27 AA00
037bah_C_C3_G4AAAAA00850.17 AA00
047bah_C_G4_C5AAAAA00900.16 AA00
057bah_C_C5_U6AAAAA00560.18 AA00
067bah_C_U6_A7AAAAA08710.26 AA08
077bah_C_A7_G8AAwAA11760.22 AA11
087bah_C_G8_C9AAAAA08620.31 AA08
097bah_C_C9_G10AAAAA08880.24 AA08
107bah_C_G10_U11AAAAA08830.20 AA08
117bah_C_U11_C12A-BAB05650.30 AB05
127bah_D_G1_A2AAAAA00890.14 AA00
137bah_D_A2_C3AAAAA00770.22 AA00
147bah_D_C3_G4AAAAA00880.15 AA00
157bah_D_G4_C5AAAAA00870.09 AA00
167bah_D_C5_U6AAAAA00580.17 AA00
177bah_D_U6_A7AAAAA08700.28 AA08
187bah_D_A7_G8AAwAA11650.22 AA11
197bah_D_G8_C9AAAAA08600.23 AA08
207bah_D_C9_G10AAAAA08860.21 AA08
217bah_D_G10_U11AAAAA00740.15 AA00
227bah_D_U11_C12A-BAB05620.26 AB05

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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