DNATCO v4.1: results

Structure of RcsB from Salmonella enterica serovar Typhimurium bound to promoter rprA in the presence of phosphomimetic BeF3-

Results of the assignment of 84 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	6zj2_E_DC2_DT3	NAN	NANT	0	0.50	BB17
02	6zj2_E_DT3_DA4	A-B	AB02	50	0.52	AB02
03	6zj2_E_DA4_DT5	BBB	BB00	85	0.19	BB00
04	6zj2_E_DT5_DT6	B-A	BA05	67	0.24	BA05
05	6zj2_E_DT6_DG7	NAN	NANT	0	0.51	BA10
06	6zj2_E_DG7_DA8	BBw	BB16	26	0.57	BB16
07	6zj2_E_DA8_DG9	BBB	BB00	38	0.26	BB00
08	6zj2_E_DG9_DA10	BBB	BB00	91	0.11	BB00
09	6zj2_E_DA10_DC11	BBB	BB00	78	0.24	BB00
10	6zj2_E_DC11_DG12	BBB	BB00	14	0.40	BB00
11	6zj2_E_DG12_DA13	BBB	BB00	51	0.18	BB00
12	6zj2_E_DA13_DA14	B-A	BA01	20	0.18	BA01
13	6zj2_E_DA14_DT15	BBB	BB01	44	0.35	BB01
14	6zj2_E_DT15_DC16	BBB	BB00	82	0.22	BB00
15	6zj2_E_DC16_DT17	miB	BB13	89	0.23	BB13
16	6zj2_E_DT17_DG18	BBw	BB16	35	0.34	BB16
17	6zj2_E_DG18_DA19	miB	BB15	11	0.30	BB15
18	6zj2_E_DA19_DT20	B-A	BA08	78	0.38	BA08
19	6zj2_E_DT20_DC21	NAN	NANT	0	0.40	BB03
20	6zj2_E_DC21_DG22	SYN	BB2S	21	0.42	BB2S
21	6zj2_E_DG22_DG23	NAN	NANT	0	0.76	AA11
22	6zj2_F_DC17_DC18	NAN	NANT	0	0.59	IC06
23	6zj2_F_DC18_DG19	B-A	BA08	65	0.28	BA08
24	6zj2_F_DG19_DA20	NAN	NANT	0	0.42	AB02
25	6zj2_F_DA20_DT21	B-A	BA05	65	0.17	BA05
26	6zj2_F_DT21_DC22	B-A	BA05	38	0.31	BA05
27	6zj2_F_DC22_DA23	A-B	AB03	56	0.50	AB03
28	6zj2_F_DA23_DG24	NAN	NANT	0	0.46	BB13
29	6zj2_F_DG24_DA25	NAN	NANT	0	0.72	AA04
30	6zj2_F_DA25_DT26	BBB	BB00	35	0.28	BB00
31	6zj2_F_DT26_DT27	NAN	NANT	0	0.48	BA08
32	6zj2_F_DT27_DC28	BBB	BB00	43	0.27	BB00
33	6zj2_F_DC28_DG29	BBB	BB01	79	0.17	BB01
34	6zj2_F_DG29_DT30	BBB	BB01	69	0.28	BB01
35	6zj2_F_DT30_DC31	BBB	BB00	54	0.18	BB00
36	6zj2_F_DC31_DT32	BBB	BB01	33	0.24	BB01
37	6zj2_F_DT32_DC33	BBB	BB01	83	0.28	BB01
38	6zj2_F_DC33_DA34	BBB	BB01	70	0.19	BB01
39	6zj2_F_DA34_DA35	NAN	NANT	0	0.38	BA08
40	6zj2_F_DA35_DT36	NAN	NANT	0	0.40	AA04
41	6zj2_F_DT36_DA37	NAN	NANT	0	0.79	AA10
42	6zj2_F_DA37_DG38	NAN	NANT	0	0.68	BB16
43	6zj2_G_DC2_DT3	B-A	BA05	60	0.30	BA05
44	6zj2_G_DT3_DA4	A-B	AB02	67	0.47	AB02
45	6zj2_G_DA4_DT5	BBB	BB00	67	0.15	BB00
46	6zj2_G_DT5_DT6	B-A	BA05	69	0.26	BA05
47	6zj2_G_DT6_DG7	NAN	NANT	0	0.41	BA10
48	6zj2_G_DG7_DA8	BBw	BB16	42	0.56	BB16
49	6zj2_G_DA8_DG9	BBB	BB00	80	0.17	BB00
50	6zj2_G_DG9_DA10	BBB	BB00	84	0.22	BB00
51	6zj2_G_DA10_DC11	BBB	BB01	76	0.20	BB01
52	6zj2_G_DC11_DG12	NAN	NANT	0	0.30	BB04
53	6zj2_G_DG12_DA13	NAN	NANT	0	0.29	BB10
54	6zj2_G_DA13_DA14	NAN	NANT	0	0.47	BA08
55	6zj2_G_DA14_DT15	A-B	AB01	30	0.40	AB01
56	6zj2_G_DT15_DC16	BBB	BB01	83	0.17	BB01
57	6zj2_G_DC16_DT17	miB	BB13	72	0.26	BB13
58	6zj2_G_DT17_DG18	BBw	BB16	38	0.34	BB16
59	6zj2_G_DG18_DA19	BBB	BB00	44	0.25	BB00
60	6zj2_G_DA19_DT20	BBB	BB00	27	0.29	BB00
61	6zj2_G_DT20_DC21	BBw	BB11	21	0.31	BB11
62	6zj2_G_DC21_DG22	NAN	NANT	0	0.58	BB2S
63	6zj2_G_DG22_DG23	NAN	NANT	0	0.65	BB05
64	6zj2_I_DC17_DC18	NAN	NANT	0	0.61	IC06
65	6zj2_I_DC18_DG19	NAN	NANT	0	0.50	BA17
66	6zj2_I_DG19_DA20	A-B	AB02	39	0.29	AB02
67	6zj2_I_DA20_DT21	B-A	BA05	51	0.23	BA05
68	6zj2_I_DT21_DC22	NAN	NANT	0	0.52	AA04
69	6zj2_I_DC22_DA23	NAN	NANT	0	0.57	AB03
70	6zj2_I_DA23_DG24	NAN	NANT	0	0.46	BB13
71	6zj2_I_DG24_DA25	NAN	NANT	0	0.67	BB17
72	6zj2_I_DA25_DT26	miB	BB10	31	0.34	BB10
73	6zj2_I_DT26_DT27	BBB	BB01	32	0.40	BB01
74	6zj2_I_DT27_DC28	BBB	BB00	43	0.32	BB00
75	6zj2_I_DC28_DG29	B-A	BA05	90	0.21	BA05
76	6zj2_I_DG29_DT30	BBB	BB01	63	0.33	BB01
77	6zj2_I_DT30_DC31	BBB	BB00	74	0.17	BB00
78	6zj2_I_DC31_DT32	BBB	BB00	86	0.20	BB00
79	6zj2_I_DT32_DC33	B-A	BA05	82	0.22	BA05
80	6zj2_I_DC33_DA34	A-B	AB03	71	0.33	AB03
81	6zj2_I_DA34_DA35	B-A	BA08	59	0.34	BA08
82	6zj2_I_DA35_DT36	NAN	NANT	0	0.50	AA10
83	6zj2_I_DT36_DA37	NAN	NANT	0	0.90	BB12
84	6zj2_I_DA37_DG38	NAN	NANT	0	0.58	BB16

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 84 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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