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Conformers: ABBIImiBZICOPNSYNN
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Structure of full-length La Crosse virus L protein (polymerase)

Results of the assignment of 62 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
016z6b_BBB_A-1_G0AAAAA08640.29 AA08
026z6b_BBB_G0_U1AAAAA00740.22 AA00
036z6b_BBB_U1_A2AAAAA00670.16 AA00
046z6b_BBB_A2_G3AAAAA04820.29 AA04
056z6b_BBB_G3_U4NANNANT01.51 OP17
066z6b_BBB_U4_G5NANNANT01.24 IC02
076z6b_BBB_G5_U6NANNANT01.18 BA16
086z6b_BBB_U6_G7NANNANT00.93 OP01
096z6b_BBB_G7_C8AAAAA04610.34 AA04
106z6b_CCC_U1_U2AAAAA00360.41 AA00
116z6b_CCC_U2_A3AAAAA00730.20 AA00
126z6b_CCC_A3_G4AAAAA00700.20 AA00
136z6b_CCC_G4_U5AAAAA00830.18 AA00
146z6b_CCC_U5_A6AAAAA00850.17 AA00
156z6b_CCC_A6_G7AAwAA01590.22 AA01
166z6b_CCC_G7_U8AAAAA00610.26 AA00
176z6b_CCC_U8_A9NANNANT02.56 IC02
186z6b_CCC_A9_C10NANNANT01.18 AA07
196z6b_CCC_C10_A11NANNANT00.57 OP15
206z6b_CCC_A11_C12AAAAA00720.24 AA00
216z6b_CCC_C12_U13NANNANT00.81 AA04
226z6b_CCC_U13_A14NANNANT01.02 OP28
236z6b_CCC_A14_C15NANNANT01.13 OP04
246z6b_CCC_C15_U16NANNANT00.42 AB04
256z6b_DDD_G2_C3AAAAA08590.33 AA08
266z6b_DDD_C3_U4AAAAA00630.35 AA00
276z6b_DDD_U4_A5AAAAA00780.20 AA00
286z6b_DDD_A5_C6AAwAA10590.52 AA10
296z6b_DDD_C6_U7AAAAA00850.15 AA00
306z6b_DDD_U7_A8AAAAA08840.22 AA08
316z6b_DDD_A8_A9AAAAA00280.34 AA00
326z6b_HHH_U1_U2AAAAA00350.42 AA00
336z6b_HHH_U2_A3AAAAA00730.20 AA00
346z6b_HHH_A3_G4AAAAA00700.20 AA00
356z6b_HHH_G4_U5AAAAA00840.18 AA00
366z6b_HHH_U5_A6AAAAA00870.17 AA00
376z6b_HHH_A6_G7AAwAA01580.21 AA01
386z6b_HHH_G7_U8AAAAA00610.26 AA00
396z6b_HHH_U8_A9NANNANT02.56 IC02
406z6b_HHH_A9_C10NANNANT01.21 AA07
416z6b_HHH_C10_A11NANNANT00.59 OP15
426z6b_HHH_A11_C12AAAAA00740.23 AA00
436z6b_HHH_C12_U13NANNANT00.81 AA04
446z6b_HHH_U13_A14NANNANT01.03 OP28
456z6b_HHH_A14_C15NANNANT01.14 OP04
466z6b_HHH_C15_U16NANNANT00.43 AB04
476z6b_UUU_A-1_G0AAAAA08850.29 AA08
486z6b_UUU_G0_U1AAAAA08720.21 AA08
496z6b_UUU_U1_A2AAAAA00670.16 AA00
506z6b_UUU_A2_G3AAAAA00470.29 AA00
516z6b_UUU_G3_U4NANNANT01.45 OP17
526z6b_UUU_U4_G5NANNANT01.37 IC02
536z6b_UUU_G5_U6NANNANT00.94 BA16
546z6b_UUU_U6_G7NANNANT01.05 OP01
556z6b_UUU_G7_C8AAAAA00720.27 AA00
566z6b_XXX_G2_C3AAAAA08780.28 AA08
576z6b_XXX_C3_U4AAAAA00630.24 AA00
586z6b_XXX_U4_A5AAAAA00890.14 AA00
596z6b_XXX_A5_C6AAAAA04730.28 AA04
606z6b_XXX_C6_U7AAAAA00820.18 AA00
616z6b_XXX_U7_A8AAAAA08900.19 AA08
626z6b_XXX_A8_A9AAAAA08240.36 AA08

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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