DNATCO v4.1: results

Crystal Structure of a Self-Assembling DNA Crystal Scaffold with Rhombohedral Symmetry

Results of the assignment of 60 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	6wjk_B_DC1_DA2	NAN	NANT	0	0.83	AB02
02	6wjk_B_DA2_DC3	BBB	BB01	28	0.38	BB01
03	6wjk_B_DC3_DT4	BBB	BB00	16	0.55	BB00
04	6wjk_B_DT4_DG5	BBB	BB00	52	0.34	BB00
05	6wjk_B_DG5_DA6	BBB	BB00	85	0.20	BB00
06	6wjk_B_DA6_DC7	BBB	BB00	84	0.26	BB00
07	6wjk_B_DC7_DT8	BBw	BB03	8	0.71	BB03
08	6wjk_B_DT8_DC9	BBB	BB00	32	0.53	BB00
09	6wjk_B_DC9_DA10	NAN	NANT	0	0.67	BA10
10	6wjk_B_DA10_DT11	NAN	NANT	0	0.51	AA04
11	6wjk_B_DT11_DG12	NAN	NANT	0	0.45	AA00
12	6wjk_B_DG12_DC13	AAA	AA00	62	0.40	AA00
13	6wjk_B_DC13_DT14	A-B	AB01	40	0.34	AB01
14	6wjk_B_DT14_DC15	BBw	BB03	71	0.26	BB03
15	6wjk_B_DC15_DA16	NAN	NANT	0	0.48	BB10
16	6wjk_B_DA16_DT17	NAN	NANT	0	0.54	BB03
17	6wjk_B_DT17_DC18	NAN	NANT	0	0.51	BB03
18	6wjk_B_DC18_DT19	BBw	BB03	33	0.47	BB03
19	6wjk_B_DT19_DG20	NAN	NANT	0	0.37	BB03
20	6wjk_B_DG20_DA21	B-A	BA10	41	0.44	BA10
21	6wjk_B_DA21_DC22	NAN	NANT	0	0.60	AA11
22	6wjk_B_DC22_DA23	BBw	BB03	47	0.29	BB03
23	6wjk_B_DA23_DG24	BBw	BB03	61	0.31	BB03
24	6wjk_B_DG24_DT25	NAN	NANT	0	0.62	BB13
25	6wjk_B_DT25_DC26	BBw	BB03	53	0.36	BB03
26	6wjk_B_DC26_DT27	BBw	BB03	62	0.33	BB03
27	6wjk_B_DT27_DG28	B-A	BA05	20	0.48	BA05
28	6wjk_B_DG28_DT29	NAN	NANT	0	0.53	BB13
29	6wjk_B_DT29_DT30	NAN	NANT	0	0.47	BB03
30	6wjk_B_DT30_DT31	BBB	BB01	12	0.25	BB01
31	6wjk_B_DT31_DC32	NAN	NANT	0	0.90	AB02
32	6wjk_C_DA19_DG20	NAN	NANT	0	0.74	AA01
33	6wjk_C_DG20_DC21	NAN	NANT	0	0.56	BB16
34	6wjk_C_DC21_DA22	NAN	NANT	0	0.69	BB03
35	6wjk_C_DA22_DT23	NAN	NANT	0	0.60	BB16
36	6wjk_C_DT23_DG24	BBw	BB02	43	0.28	BB02
37	6wjk_C_DG24_DA25	BBB	BB00	47	0.27	BB00
38	6wjk_D_DG26_DT27	NAN	NANT	0	0.74	BB02
39	6wjk_D_DT27_DC28	NAN	NANT	0	0.44	AB01
40	6wjk_D_DC28_DA29	NAN	NANT	0	0.66	BB03
41	6wjk_D_DA29_DG30	NAN	NANT	0	0.46	AA05
42	6wjk_A_DT1_DG2	B12	BB04	28	0.46	BB04
43	6wjk_A_DG2_DG3	miB	BB13	63	0.38	BB13
44	6wjk_A_DG3_DA4	NAN	NANT	0	0.84	BB02
45	6wjk_A_DA4_DA5	BBB	BB00	41	0.54	BB00
46	6wjk_A_DA5_DA6	miB	BB12	49	0.45	BB12
47	6wjk_A_DA6_DC7	NAN	NANT	0	0.68	AA01
48	6wjk_A_DC7_DA8	A-B	AB01	12	0.38	AB01
49	6wjk_A_DA8_DG9	NAN	NANT	0	0.44	BB11
50	6wjk_A_DG9_DA10	BBw	BB03	19	0.68	BB03
51	6wjk_A_DA10_DC11	NAN	NANT	0	0.62	BB03
52	6wjk_A_DC11_DT12	NAN	NANT	0	0.38	AA01
53	6wjk_A_DT12_DG13	NAN	NANT	0	0.39	BB03
54	6wjk_A_DG13_DT14	NAN	NANT	0	0.57	AA00
55	6wjk_A_DT14_DC15	BBB	BB01	44	0.20	BB01
56	6wjk_A_DC15_DA16	NAN	NANT	0	0.69	BB03
57	6wjk_A_DA16_DG17	BBB	BB00	47	0.48	BB00
58	6wjk_A_DG17_DA18	BB2	BB08	67	0.35	BB08
59	6wjk_A_DA18_DT19	miB	BB13	27	0.47	BB13
60	6wjk_A_DT19_DG20	NAN	NANT	0	0.77	AA01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 60 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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