DNATCO v4.1: results

Crystal structure of DPO4 extension past 8-oxoadenine (oxoA) and dT

Results of the assignment of 109 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	6vnp_P_DG0_DG1	BBB	BB00	73	0.19	BB00
002	6vnp_P_DG1_DG2	BB2	BB07	63	0.28	BB07
003	6vnp_P_DG2_DG3	B-A	BA10	55	0.59	BA10
004	6vnp_P_DG3_DG4	NAN	NANT	0	0.38	AB02
005	6vnp_P_DG4_DA5	B-A	BA16	41	0.53	BA16
006	6vnp_P_DA5_DA6	A-B	AB03	16	0.45	AB03
007	6vnp_P_DA6_DG7	BBB	BB00	60	0.30	BB00
008	6vnp_P_DG7_DG8	BBB	BB00	72	0.25	BB00
009	6vnp_P_DG8_DA9	BBB	BB00	14	0.25	BB00
010	6vnp_P_DA9_DT10	BBB	BB01	53	0.25	BB01
011	6vnp_P_DT10_DT11	B-A	BA05	67	0.24	BA05
012	6vnp_P_DT11_DC12	B-A	BA05	23	0.30	BA05
013	6vnp_P_DC12_DT13	AAA	AA00	49	0.31	AA00
014	6vnp_T_DC3_DA4	B-A	BA08	18	0.55	BA08
015	6vnp_T_DA4_DT5	NAN	NANT	0	0.65	OP28
016	6vnp_T_DG7_DA8	B-A	BA05	51	0.13	BA05
017	6vnp_T_DA8_DA9	BBB	BB01	12	0.40	BB01
018	6vnp_T_DA9_DT10	BBB	BB01	76	0.18	BB01
019	6vnp_T_DT10_DC11	B-A	BA01	58	0.20	BA01
020	6vnp_T_DC11_DC12	A-B	AB01	14	0.28	AB01
021	6vnp_T_DC12_DT13	BBB	BB00	39	0.22	BB00
022	6vnp_T_DT13_DT14	BBB	BB00	48	0.24	BB00
023	6vnp_T_DT14_DC15	BBB	BB01	84	0.14	BB01
024	6vnp_T_DC15_DC16	BBB	BB00	61	0.28	BB00
025	6vnp_T_DC16_DC17	miB	BB10	63	0.20	BB10
026	6vnp_T_DC17_DC18	B-A	BA09	42	0.31	BA09
027	6vnp_T_DC18_DC19	NAN	NANT	0	0.53	BB10
028	6vnp_B_DG0_DG1	BBB	BB00	65	0.23	BB00
029	6vnp_B_DG1_DG2	BB2	BB07	69	0.22	BB07
030	6vnp_B_DG2_DG3	B-A	BA10	62	0.51	BA10
031	6vnp_B_DG3_DG4	NAN	NANT	0	0.46	AB02
032	6vnp_B_DG4_DA5	A-B	AB03	65	0.27	AB03
033	6vnp_B_DA5_DA6	B12	BB04	47	0.28	BB04
034	6vnp_B_DA6_DG7	BBB	BB00	66	0.29	BB00
035	6vnp_B_DG7_DG8	BBB	BB01	45	0.31	BB01
036	6vnp_B_DG8_DA9	miB	BB15	43	0.34	BB15
037	6vnp_B_DA9_DT10	BBB	BB01	12	0.31	BB01
038	6vnp_B_DT10_DT11	BBB	BB01	54	0.20	BB01
039	6vnp_B_DT11_DC12	B-A	BA05	25	0.34	BA05
040	6vnp_B_DC12_DT13	AAA	AA00	44	0.32	AA00
041	6vnp_C_DT2_DC3	NAN	NANT	0	1.04	OP18
042	6vnp_C_DC3_DA4	NAN	NANT	0	0.69	BB01
043	6vnp_C_DA4_DT5	NAN	NANT	0	0.64	OP28
044	6vnp_C_DG7_DA8	B-A	BA05	55	0.15	BA05
045	6vnp_C_DA8_DA9	BBB	BB01	20	0.37	BB01
046	6vnp_C_DA9_DT10	BBB	BB00	56	0.15	BB00
047	6vnp_C_DT10_DC11	B-A	BA01	33	0.19	BA01
048	6vnp_C_DC11_DC12	BBB	BB01	30	0.30	BB01
049	6vnp_C_DC12_DT13	BBB	BB00	59	0.22	BB00
050	6vnp_C_DT13_DT14	BBB	BB00	34	0.24	BB00
051	6vnp_C_DT14_DC15	BBB	BB01	55	0.12	BB01
052	6vnp_C_DC15_DC16	NAN	NANT	0	0.42	BA08
053	6vnp_C_DC16_DC17	NAN	NANT	0	0.31	BB10
054	6vnp_C_DC17_DC18	B-A	BA09	50	0.25	BA09
055	6vnp_C_DC18_DC19	NAN	NANT	0	0.48	AA03
056	6vnp_E_DG0_DG1	NAN	NANT	0	0.62	AB02
057	6vnp_E_DG1_DG2	NAN	NANT	0	1.19	OP24
058	6vnp_E_DG2_DG3	NAN	NANT	0	0.78	BB10
059	6vnp_E_DG3_DG4	B-A	BA17	34	0.30	BA17
060	6vnp_E_DG4_DA5	AAA	AA02	12	0.55	AA02
061	6vnp_E_DA5_DA6	BBB	BB01	60	0.25	BB01
062	6vnp_E_DA6_DG7	BBB	BB00	74	0.24	BB00
063	6vnp_E_DG7_DG8	BBB	BB01	22	0.30	BB01
064	6vnp_E_DG8_DA9	miB	BB15	48	0.33	BB15
065	6vnp_E_DA9_DT10	BBB	BB01	46	0.31	BB01
066	6vnp_E_DT10_DT11	B-A	BA05	61	0.23	BA05
067	6vnp_E_DT11_DC12	B-A	BA05	31	0.30	BA05
068	6vnp_E_DC12_DT13	AAA	AA00	63	0.31	AA00
069	6vnp_F_DC3_DA4	NAN	NANT	0	0.59	BA08
070	6vnp_F_DA4_DT5	NAN	NANT	0	0.62	OP28
071	6vnp_F_DG7_DA8	B-A	BA05	77	0.14	BA05
072	6vnp_F_DA8_DA9	A-B	AB03	71	0.41	AB03
073	6vnp_F_DA9_DT10	BBB	BB00	69	0.13	BB00
074	6vnp_F_DT10_DC11	B-A	BA08	76	0.35	BA08
075	6vnp_F_DC11_DC12	A-B	AB01	31	0.27	AB01
076	6vnp_F_DC12_DT13	BBB	BB00	61	0.18	BB00
077	6vnp_F_DT13_DT14	BBB	BB00	44	0.26	BB00
078	6vnp_F_DT14_DC15	BBB	BB01	77	0.19	BB01
079	6vnp_F_DC15_DC16	BBB	BB01	66	0.20	BB01
080	6vnp_F_DC16_DC17	NAN	NANT	0	0.45	BA09
081	6vnp_F_DC17_DC18	NAN	NANT	0	0.65	BB10
082	6vnp_F_DC18_DC19	NAN	NANT	0	0.43	BB10
083	6vnp_H_DG0_DG1	A-B	AB02	30	0.33	AB02
084	6vnp_H_DG1_DG2	BB2	BB07	47	0.31	BB07
085	6vnp_H_DG2_DG3	BBB	BB00	45	0.40	BB00
086	6vnp_H_DG3_DG4	NAN	NANT	0	0.49	BA08
087	6vnp_H_DG4_DA5	NAN	NANT	0	0.48	AA08
088	6vnp_H_DA5_DA6	A-B	AB03	85	0.22	AB03
089	6vnp_H_DA6_DG7	BBB	BB00	73	0.30	BB00
090	6vnp_H_DG7_DG8	BBB	BB00	24	0.33	BB00
091	6vnp_H_DG8_DA9	BBB	BB00	35	0.28	BB00
092	6vnp_H_DA9_DT10	BBB	BB01	24	0.29	BB01
093	6vnp_H_DT10_DT11	B-A	BA05	57	0.24	BA05
094	6vnp_H_DT11_DC12	B-A	BA05	22	0.33	BA05
095	6vnp_H_DC12_DT13	AAA	AA00	47	0.31	AA00
096	6vnp_I_DC3_DA4	NAN	NANT	0	0.61	BA08
097	6vnp_I_DA4_DT5	NAN	NANT	0	0.66	OP28
098	6vnp_I_DG7_DA8	B-A	BA05	69	0.13	BA05
099	6vnp_I_DA8_DA9	BBB	BB01	14	0.39	BB01
100	6vnp_I_DA9_DT10	BBB	BB01	63	0.16	BB01
101	6vnp_I_DT10_DC11	B-A	BA01	55	0.20	BA01
102	6vnp_I_DC11_DC12	A-B	AB01	74	0.27	AB01
103	6vnp_I_DC12_DT13	BBB	BB00	65	0.21	BB00
104	6vnp_I_DT13_DT14	BBB	BB01	44	0.29	BB01
105	6vnp_I_DT14_DC15	BBB	BB00	45	0.16	BB00
106	6vnp_I_DC15_DC16	BBB	BB00	37	0.21	BB00
107	6vnp_I_DC16_DC17	miB	BB10	40	0.24	BB10
108	6vnp_I_DC17_DC18	B-A	BA09	18	0.35	BA09
109	6vnp_I_DC18_DC19	NAN	NANT	0	0.49	AA03

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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Results of the assignment of 109 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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