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Conformers: ABBIImiBZICOPNSYNN
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Telomerase Reverse Transcriptase product complex, TERT:DNA

Results of the assignment of 30 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
016usp_E_DG1_DG2BBBBB00590.31 BB00
026usp_E_DG2_DT3NANNANT00.39 BA09
036usp_E_DT3_DC4NANNANT00.52 AA11
046usp_E_DC4_DA5NANNANT01.37 OP24
056usp_E_DA5_DG6AAwAA06570.38 AA06
066usp_E_DG6_DG7AAAAA00750.21 AA00
076usp_E_DG7_DT8AAAAA00940.15 AA00
086usp_E_DT8_DC9AAAAA00870.22 AA00
096usp_E_DC9_DA10AAAAA00710.25 AA00
106usp_E_DA10_DG11NANNANT00.36 AB03
116usp_E_DG11_DG12NANNANT00.35 BA10
126usp_E_DG12_DT13AAAAA00870.15 AA00
136usp_E_DT13_DC14NANNANT00.33 AA01
146usp_E_DC14_DA15AAAAA08260.35 AA08
156usp_E_DA15_DG16NANNANT00.38 AA06
166usp_F_C1_U2AAAAA00610.15 AA00
176usp_F_U2_G3AAAAA08850.23 AA08
186usp_F_G3_A4AAAAA08840.20 AA08
196usp_F_A4_C5AAAAA08860.17 AA08
206usp_F_C5_C6AAAAA00740.21 AA00
216usp_F_C6_U7AAAAA00610.23 AA00
226usp_F_U7_G8AAAAA00710.24 AA00
236usp_F_G8_A9AAAAA00840.15 AA00
246usp_F_A9_C10AAwAA06740.26 AA06
256usp_F_C10_DC11AAAAA00380.35 AA00
266usp_F_DC11_DT12AAwAA06350.44 AA06
276usp_F_DT12_G13NANNANT00.51 AA06
286usp_F_G13_A14NANNANT00.57 AB02
296usp_F_A14_C15AAwAA01310.39 AA01
306usp_F_C15_DC16NANNANT00.52 AA01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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