DNATCO v4.1: results

Guanine-rich oligonucleotide with 5'- and 3'-GC ends form G-quadruplex with A(GGGG)A hexad, GCGC- and G-quartets and two symmetric GG and AA base pair

Results of the assignment of 260 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	6syk-m10_A_DG1_DC2	NAN	NANT	0	0.62	BBS1
002	6syk-m1_A_DG1_DC2	NAN	NANT	0	0.68	BBS1
003	6syk-m2_A_DG1_DC2	NAN	NANT	0	0.66	BBS1
004	6syk-m3_A_DG1_DC2	NAN	NANT	0	0.62	BBS1
005	6syk-m4_A_DG1_DC2	NAN	NANT	0	0.69	BBS1
006	6syk-m5_A_DG1_DC2	NAN	NANT	0	0.67	BBS1
007	6syk-m6_A_DG1_DC2	NAN	NANT	0	0.67	BBS1
008	6syk-m7_A_DG1_DC2	NAN	NANT	0	0.71	BBS1
009	6syk-m8_A_DG1_DC2	NAN	NANT	0	0.72	BBS1
010	6syk-m9_A_DG1_DC2	NAN	NANT	0	0.66	BBS1
011	6syk-m10_A_DC2_DG3	NAN	NANT	0	1.23	OP08
012	6syk-m1_A_DC2_DG3	NAN	NANT	0	0.88	BB13
013	6syk-m2_A_DC2_DG3	NAN	NANT	0	1.29	OP08
014	6syk-m3_A_DC2_DG3	NAN	NANT	0	1.22	OP08
015	6syk-m4_A_DC2_DG3	NAN	NANT	0	1.04	BA09
016	6syk-m5_A_DC2_DG3	NAN	NANT	0	1.30	OP08
017	6syk-m6_A_DC2_DG3	NAN	NANT	0	1.03	BA09
018	6syk-m7_A_DC2_DG3	NAN	NANT	0	1.13	OP08
019	6syk-m8_A_DC2_DG3	NAN	NANT	0	1.11	OP08
020	6syk-m9_A_DC2_DG3	NAN	NANT	0	0.88	BB13
021	6syk-m10_A_DG3_DG4	ZZZ	ZZ01	67	0.30	ZZ01
022	6syk-m1_A_DG3_DG4	NAN	NANT	0	0.47	ZZ01
023	6syk-m2_A_DG3_DG4	NAN	NANT	0	1.64	AA01
024	6syk-m3_A_DG3_DG4	ZZZ	ZZ01	46	0.42	ZZ01
025	6syk-m4_A_DG3_DG4	ZZZ	ZZ01	62	0.35	ZZ01
026	6syk-m5_A_DG3_DG4	NAN	NANT	0	1.63	AA01
027	6syk-m6_A_DG3_DG4	ZZZ	ZZ01	66	0.34	ZZ01
028	6syk-m7_A_DG3_DG4	ZZZ	ZZ01	61	0.31	ZZ01
029	6syk-m8_A_DG3_DG4	ZZZ	ZZ01	63	0.31	ZZ01
030	6syk-m9_A_DG3_DG4	NAN	NANT	0	0.44	ZZ01
031	6syk-m10_A_DG4_DA5	NAN	NANT	0	0.45	BB08
032	6syk-m1_A_DG4_DA5	BB2	BB08	53	0.23	BB08
033	6syk-m2_A_DG4_DA5	NAN	NANT	0	0.49	BA10
034	6syk-m3_A_DG4_DA5	BBB	BB00	84	0.20	BB00
035	6syk-m4_A_DG4_DA5	BB2	BB07	49	0.41	BB07
036	6syk-m5_A_DG4_DA5	NAN	NANT	0	0.52	BA10
037	6syk-m6_A_DG4_DA5	NAN	NANT	0	0.41	BB08
038	6syk-m7_A_DG4_DA5	NAN	NANT	0	0.62	BB02
039	6syk-m8_A_DG4_DA5	NAN	NANT	0	0.65	BB02
040	6syk-m9_A_DG4_DA5	B12	BB04	11	0.50	BB04
041	6syk-m10_A_DA5_DG6	NAN	NANT	0	0.82	BB07
042	6syk-m1_A_DA5_DG6	BBB	BB00	25	0.60	BB00
043	6syk-m2_A_DA5_DG6	NAN	NANT	0	0.74	AB04
044	6syk-m3_A_DA5_DG6	BB2	BB07	11	0.73	BB07
045	6syk-m4_A_DA5_DG6	NAN	NANT	0	0.62	BB00
046	6syk-m5_A_DA5_DG6	NAN	NANT	0	0.76	AB05
047	6syk-m6_A_DA5_DG6	BB2	BB07	15	0.76	BB07
048	6syk-m7_A_DA5_DG6	NAN	NANT	0	0.57	BB00
049	6syk-m8_A_DA5_DG6	NAN	NANT	0	0.60	BB00
050	6syk-m9_A_DA5_DG6	BBB	BB00	19	0.49	BB00
051	6syk-m10_A_DG6_DG7	NAN	NANT	0	0.61	OP24
052	6syk-m1_A_DG6_DG7	NAN	NANT	0	0.58	OP24
053	6syk-m2_A_DG6_DG7	NAN	NANT	0	0.56	OP24
054	6syk-m3_A_DG6_DG7	NAN	NANT	0	0.59	OP24
055	6syk-m4_A_DG6_DG7	NAN	NANT	0	0.56	OP24
056	6syk-m5_A_DG6_DG7	NAN	NANT	0	0.59	OP24
057	6syk-m6_A_DG6_DG7	NAN	NANT	0	0.64	OP24
058	6syk-m7_A_DG6_DG7	NAN	NANT	0	0.58	OP24
059	6syk-m8_A_DG6_DG7	NAN	NANT	0	0.60	OP24
060	6syk-m9_A_DG6_DG7	NAN	NANT	0	0.58	OP24
061	6syk-m10_A_DG7_DG8	BBw	BB16	37	0.47	BB16
062	6syk-m1_A_DG7_DG8	NAN	NANT	0	0.63	BB16
063	6syk-m2_A_DG7_DG8	NAN	NANT	0	0.52	BB16
064	6syk-m3_A_DG7_DG8	NAN	NANT	0	0.52	BB16
065	6syk-m4_A_DG7_DG8	BBw	BB16	53	0.47	BB16
066	6syk-m5_A_DG7_DG8	BBw	BB16	42	0.50	BB16
067	6syk-m6_A_DG7_DG8	NAN	NANT	0	0.60	BB16
068	6syk-m7_A_DG7_DG8	BBw	BB16	56	0.44	BB16
069	6syk-m8_A_DG7_DG8	BBw	BB16	49	0.47	BB16
070	6syk-m9_A_DG7_DG8	BBw	BB16	49	0.45	BB16
071	6syk-m10_A_DG8_DG9	BBB	BB00	38	0.43	BB00
072	6syk-m1_A_DG8_DG9	BB2	BB07	49	0.29	BB07
073	6syk-m2_A_DG8_DG9	BBB	BB01	12	0.46	BB01
074	6syk-m3_A_DG8_DG9	B-A	BA05	18	0.50	BA05
075	6syk-m4_A_DG8_DG9	NAN	NANT	0	0.50	BB07
076	6syk-m5_A_DG8_DG9	NAN	NANT	0	0.57	BB07
077	6syk-m6_A_DG8_DG9	BB2	BB07	51	0.33	BB07
078	6syk-m7_A_DG8_DG9	BBB	BB00	36	0.53	BB00
079	6syk-m8_A_DG8_DG9	NAN	NANT	0	0.54	BB07
080	6syk-m9_A_DG8_DG9	BBB	BB00	11	0.56	BB00
081	6syk-m10_A_DG9_DA10	NAN	NANT	0	1.61	BA16
082	6syk-m1_A_DG9_DA10	NAN	NANT	0	1.45	BA16
083	6syk-m2_A_DG9_DA10	NAN	NANT	0	1.54	BA16
084	6syk-m3_A_DG9_DA10	NAN	NANT	0	1.75	AA11
085	6syk-m4_A_DG9_DA10	NAN	NANT	0	1.84	BB08
086	6syk-m5_A_DG9_DA10	NAN	NANT	0	1.87	BB08
087	6syk-m6_A_DG9_DA10	NAN	NANT	0	1.50	BA16
088	6syk-m7_A_DG9_DA10	NAN	NANT	0	1.85	BB08
089	6syk-m8_A_DG9_DA10	NAN	NANT	0	1.85	BB08
090	6syk-m9_A_DG9_DA10	NAN	NANT	0	1.87	BB08
091	6syk-m10_A_DA10_DG11	NAN	NANT	0	0.64	AB04
092	6syk-m1_A_DA10_DG11	NAN	NANT	0	0.41	IC02
093	6syk-m2_A_DA10_DG11	NAN	NANT	0	0.66	AB04
094	6syk-m3_A_DA10_DG11	NAN	NANT	0	0.64	AB04
095	6syk-m4_A_DA10_DG11	NAN	NANT	0	0.73	AB04
096	6syk-m5_A_DA10_DG11	NAN	NANT	0	0.44	IC02
097	6syk-m6_A_DA10_DG11	NAN	NANT	0	0.71	AB04
098	6syk-m7_A_DA10_DG11	NAN	NANT	0	0.72	AB04
099	6syk-m8_A_DA10_DG11	NAN	NANT	0	0.71	AB04
100	6syk-m9_A_DA10_DG11	NAN	NANT	0	0.68	AB04
101	6syk-m10_A_DG11_DG12	BBw	BB16	65	0.37	BB16
102	6syk-m1_A_DG11_DG12	BBB	BB00	48	0.59	BB00
103	6syk-m2_A_DG11_DG12	BBw	BB16	62	0.35	BB16
104	6syk-m3_A_DG11_DG12	BBw	BB16	61	0.37	BB16
105	6syk-m4_A_DG11_DG12	BBB	BB00	44	0.61	BB00
106	6syk-m5_A_DG11_DG12	BBw	BB16	68	0.29	BB16
107	6syk-m6_A_DG11_DG12	BBw	BB16	70	0.24	BB16
108	6syk-m7_A_DG11_DG12	BBw	BB16	63	0.29	BB16
109	6syk-m8_A_DG11_DG12	BBw	BB16	70	0.29	BB16
110	6syk-m9_A_DG11_DG12	BBw	BB16	62	0.34	BB16
111	6syk-m10_A_DG12_DC13	NAN	NANT	0	1.21	BB15
112	6syk-m1_A_DG12_DC13	NAN	NANT	0	1.20	BB15
113	6syk-m2_A_DG12_DC13	NAN	NANT	0	1.26	BB15
114	6syk-m3_A_DG12_DC13	NAN	NANT	0	1.22	BB15
115	6syk-m4_A_DG12_DC13	NAN	NANT	0	1.20	BB15
116	6syk-m5_A_DG12_DC13	NAN	NANT	0	1.15	BB15
117	6syk-m6_A_DG12_DC13	NAN	NANT	0	1.18	BB15
118	6syk-m7_A_DG12_DC13	NAN	NANT	0	1.10	BB15
119	6syk-m8_A_DG12_DC13	NAN	NANT	0	1.12	BB15
120	6syk-m9_A_DG12_DC13	NAN	NANT	0	1.26	BB15
121	6syk-m10_A_DC13_DG14	BBB	BB00	65	0.44	BB00
122	6syk-m1_A_DC13_DG14	NAN	NANT	0	1.08	BB00
123	6syk-m2_A_DC13_DG14	BBB	BB00	64	0.47	BB00
124	6syk-m3_A_DC13_DG14	BBB	BB00	58	0.47	BB00
125	6syk-m4_A_DC13_DG14	NAN	NANT	0	0.59	BB16
126	6syk-m5_A_DC13_DG14	BBB	BB00	8	0.75	BB00
127	6syk-m6_A_DC13_DG14	BBB	BB00	7	0.78	BB00
128	6syk-m7_A_DC13_DG14	NAN	NANT	0	0.98	BB03
129	6syk-m8_A_DC13_DG14	BBw	BB16	32	0.58	BB16
130	6syk-m9_A_DC13_DG14	BBB	BB00	67	0.45	BB00
131	6syk-m10_B_DG1_DC2	NAN	NANT	0	0.64	BBS1
132	6syk-m1_B_DG1_DC2	NAN	NANT	0	0.62	BBS1
133	6syk-m2_B_DG1_DC2	NAN	NANT	0	0.69	BBS1
134	6syk-m3_B_DG1_DC2	NAN	NANT	0	0.66	BBS1
135	6syk-m4_B_DG1_DC2	NAN	NANT	0	0.69	BBS1
136	6syk-m5_B_DG1_DC2	NAN	NANT	0	0.70	BBS1
137	6syk-m6_B_DG1_DC2	NAN	NANT	0	0.68	BBS1
138	6syk-m7_B_DG1_DC2	NAN	NANT	0	0.66	BBS1
139	6syk-m8_B_DG1_DC2	NAN	NANT	0	0.66	BBS1
140	6syk-m9_B_DG1_DC2	NAN	NANT	0	0.71	BBS1
141	6syk-m10_B_DC2_DG3	NAN	NANT	0	0.99	BB13
142	6syk-m1_B_DC2_DG3	NAN	NANT	0	1.24	OP08
143	6syk-m2_B_DC2_DG3	NAN	NANT	0	1.10	OP08
144	6syk-m3_B_DC2_DG3	NAN	NANT	0	1.17	OP08
145	6syk-m4_B_DC2_DG3	NAN	NANT	0	1.19	OP08
146	6syk-m5_B_DC2_DG3	NAN	NANT	0	1.07	OP08
147	6syk-m6_B_DC2_DG3	NAN	NANT	0	1.23	OP08
148	6syk-m7_B_DC2_DG3	NAN	NANT	0	1.19	OP08
149	6syk-m8_B_DC2_DG3	NAN	NANT	0	1.20	OP08
150	6syk-m9_B_DC2_DG3	NAN	NANT	0	1.25	OP08
151	6syk-m10_B_DG3_DG4	NAN	NANT	0	1.66	AA01
152	6syk-m1_B_DG3_DG4	ZZZ	ZZ01	40	0.36	ZZ01
153	6syk-m2_B_DG3_DG4	NAN	NANT	0	0.51	ZZ01
154	6syk-m3_B_DG3_DG4	NAN	NANT	0	1.44	OP19
155	6syk-m4_B_DG3_DG4	NAN	NANT	0	1.64	AA01
156	6syk-m5_B_DG3_DG4	ZZZ	ZZ01	34	0.41	ZZ01
157	6syk-m6_B_DG3_DG4	NAN	NANT	0	1.46	OP19
158	6syk-m7_B_DG3_DG4	NAN	NANT	0	1.79	IC04
159	6syk-m8_B_DG3_DG4	NAN	NANT	0	1.78	IC04
160	6syk-m9_B_DG3_DG4	NAN	NANT	0	1.73	AA11
161	6syk-m10_B_DG4_DA5	NAN	NANT	0	0.50	BA10
162	6syk-m1_B_DG4_DA5	BBB	BB00	35	0.38	BB00
163	6syk-m2_B_DG4_DA5	BBB	BB00	37	0.49	BB00
164	6syk-m3_B_DG4_DA5	NAN	NANT	0	0.43	BA10
165	6syk-m4_B_DG4_DA5	NAN	NANT	0	0.56	BA10
166	6syk-m5_B_DG4_DA5	NAN	NANT	0	0.57	BB08
167	6syk-m6_B_DG4_DA5	NAN	NANT	0	0.52	BA10
168	6syk-m7_B_DG4_DA5	NAN	NANT	0	0.48	BA10
169	6syk-m8_B_DG4_DA5	NAN	NANT	0	0.46	BA10
170	6syk-m9_B_DG4_DA5	NAN	NANT	0	0.42	BB03
171	6syk-m10_B_DA5_DG6	A-B	AB01	27	0.68	AB01
172	6syk-m1_B_DA5_DG6	BB2	BB07	12	0.77	BB07
173	6syk-m2_B_DA5_DG6	NAN	NANT	0	0.60	BB00
174	6syk-m3_B_DA5_DG6	A-B	AB01	18	0.70	AB01
175	6syk-m4_B_DA5_DG6	NAN	NANT	0	0.79	AB05
176	6syk-m5_B_DA5_DG6	BB2	BB07	24	0.59	BB07
177	6syk-m6_B_DA5_DG6	NAN	NANT	0	0.74	AB04
178	6syk-m7_B_DA5_DG6	NAN	NANT	0	0.75	AB05
179	6syk-m8_B_DA5_DG6	NAN	NANT	0	0.76	AB05
180	6syk-m9_B_DA5_DG6	NAN	NANT	0	0.93	BB07
181	6syk-m10_B_DG6_DG7	NAN	NANT	0	0.59	OP24
182	6syk-m1_B_DG6_DG7	NAN	NANT	0	0.57	BB12
183	6syk-m2_B_DG6_DG7	NAN	NANT	0	0.57	OP24
184	6syk-m3_B_DG6_DG7	NAN	NANT	0	0.59	OP24
185	6syk-m4_B_DG6_DG7	NAN	NANT	0	0.57	OP24
186	6syk-m5_B_DG6_DG7	NAN	NANT	0	0.57	OP24
187	6syk-m6_B_DG6_DG7	NAN	NANT	0	0.57	OP24
188	6syk-m7_B_DG6_DG7	NAN	NANT	0	0.62	BB12
189	6syk-m8_B_DG6_DG7	NAN	NANT	0	0.55	OP24
190	6syk-m9_B_DG6_DG7	NAN	NANT	0	0.62	OP24
191	6syk-m10_B_DG7_DG8	NAN	NANT	0	0.63	BB16
192	6syk-m1_B_DG7_DG8	NAN	NANT	0	0.55	BB16
193	6syk-m2_B_DG7_DG8	NAN	NANT	0	0.61	BB16
194	6syk-m3_B_DG7_DG8	NAN	NANT	0	0.62	BB16
195	6syk-m4_B_DG7_DG8	BBw	BB16	40	0.43	BB16
196	6syk-m5_B_DG7_DG8	NAN	NANT	0	0.51	BB16
197	6syk-m6_B_DG7_DG8	NAN	NANT	0	0.57	BB16
198	6syk-m7_B_DG7_DG8	NAN	NANT	0	0.45	BB16
199	6syk-m8_B_DG7_DG8	BBw	BB16	52	0.45	BB16
200	6syk-m9_B_DG7_DG8	NAN	NANT	0	0.65	BB16
201	6syk-m10_B_DG8_DG9	BB2	BB07	38	0.34	BB07
202	6syk-m1_B_DG8_DG9	BBB	BB00	19	0.50	BB00
203	6syk-m2_B_DG8_DG9	BB2	BB07	41	0.32	BB07
204	6syk-m3_B_DG8_DG9	BB2	BB07	43	0.33	BB07
205	6syk-m4_B_DG8_DG9	BBB	BB00	15	0.53	BB00
206	6syk-m5_B_DG8_DG9	B-A	BA05	46	0.47	BA05
207	6syk-m6_B_DG8_DG9	BBB	BB01	33	0.41	BB01
208	6syk-m7_B_DG8_DG9	BBB	BB00	32	0.46	BB00
209	6syk-m8_B_DG8_DG9	BBB	BB00	21	0.52	BB00
210	6syk-m9_B_DG8_DG9	BB2	BB07	38	0.32	BB07
211	6syk-m10_B_DG9_DA10	NAN	NANT	0	1.63	BB08
212	6syk-m1_B_DG9_DA10	NAN	NANT	0	1.75	AA11
213	6syk-m2_B_DG9_DA10	NAN	NANT	0	1.63	BB08
214	6syk-m3_B_DG9_DA10	NAN	NANT	0	1.65	BB08
215	6syk-m4_B_DG9_DA10	NAN	NANT	0	1.87	BB08
216	6syk-m5_B_DG9_DA10	NAN	NANT	0	1.78	AA11
217	6syk-m6_B_DG9_DA10	NAN	NANT	0	1.53	BA16
218	6syk-m7_B_DG9_DA10	NAN	NANT	0	1.79	OP19
219	6syk-m8_B_DG9_DA10	NAN	NANT	0	1.89	OP19
220	6syk-m9_B_DG9_DA10	NAN	NANT	0	1.62	BB08
221	6syk-m10_B_DA10_DG11	NAN	NANT	0	0.43	IC02
222	6syk-m1_B_DA10_DG11	NAN	NANT	0	0.67	AB04
223	6syk-m2_B_DA10_DG11	NAN	NANT	0	0.43	IC02
224	6syk-m3_B_DA10_DG11	NAN	NANT	0	0.42	IC02
225	6syk-m4_B_DA10_DG11	NAN	NANT	0	0.68	AB04
226	6syk-m5_B_DA10_DG11	NAN	NANT	0	0.63	AB04
227	6syk-m6_B_DA10_DG11	NAN	NANT	0	0.64	AB04
228	6syk-m7_B_DA10_DG11	NAN	NANT	0	0.69	AB04
229	6syk-m8_B_DA10_DG11	NAN	NANT	0	0.72	AB04
230	6syk-m9_B_DA10_DG11	NAN	NANT	0	0.44	IC02
231	6syk-m10_B_DG11_DG12	BBB	BB00	43	0.59	BB00
232	6syk-m1_B_DG11_DG12	BBw	BB16	68	0.31	BB16
233	6syk-m2_B_DG11_DG12	BBB	BB00	44	0.59	BB00
234	6syk-m3_B_DG11_DG12	BBB	BB00	44	0.59	BB00
235	6syk-m4_B_DG11_DG12	BBw	BB16	58	0.40	BB16
236	6syk-m5_B_DG11_DG12	BBB	BB00	32	0.56	BB00
237	6syk-m6_B_DG11_DG12	BBw	BB16	66	0.40	BB16
238	6syk-m7_B_DG11_DG12	BBB	BB00	41	0.52	BB00
239	6syk-m8_B_DG11_DG12	BBw	BB16	72	0.42	BB16
240	6syk-m9_B_DG11_DG12	BBB	BB00	46	0.60	BB00
241	6syk-m10_B_DG12_DC13	NAN	NANT	0	1.13	BB15
242	6syk-m1_B_DG12_DC13	NAN	NANT	0	1.26	BB15
243	6syk-m2_B_DG12_DC13	NAN	NANT	0	1.14	BB15
244	6syk-m3_B_DG12_DC13	NAN	NANT	0	1.13	BB15
245	6syk-m4_B_DG12_DC13	NAN	NANT	0	1.28	BB15
246	6syk-m5_B_DG12_DC13	NAN	NANT	0	1.16	BB15
247	6syk-m6_B_DG12_DC13	NAN	NANT	0	1.26	BB15
248	6syk-m7_B_DG12_DC13	NAN	NANT	0	1.26	BB15
249	6syk-m8_B_DG12_DC13	NAN	NANT	0	1.10	BB15
250	6syk-m9_B_DG12_DC13	NAN	NANT	0	1.14	BB15
251	6syk-m10_B_DC13_DG14	NAN	NANT	0	1.09	BB03
252	6syk-m1_B_DC13_DG14	BBB	BB00	61	0.49	BB00
253	6syk-m2_B_DC13_DG14	NAN	NANT	0	1.06	BB03
254	6syk-m3_B_DC13_DG14	NAN	NANT	0	1.08	BB03
255	6syk-m4_B_DC13_DG14	BBB	BB00	61	0.50	BB00
256	6syk-m5_B_DC13_DG14	NAN	NANT	0	1.03	IC06
257	6syk-m6_B_DC13_DG14	BBB	BB00	63	0.48	BB00
258	6syk-m7_B_DC13_DG14	BBB	BB00	65	0.47	BB00
259	6syk-m8_B_DC13_DG14	NAN	NANT	0	1.17	IC06
260	6syk-m9_B_DC13_DG14	NAN	NANT	0	1.08	BB03

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

Results of the assignment of 260 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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