DNATCO v4.1: results

Structure of the Plasmodium falciparum SIP2 DNA-binding AP2 tandem repeat in complex with two SPE2 half-sites

Results of the assignment of 102 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	6sy0_E_DG1_DG2	B12	BB04	54	0.26	BB04
002	6sy0_E_DG2_DT3	BBB	BB00	59	0.34	BB00
003	6sy0_E_DT3_DG4	B12	BB04	63	0.37	BB04
004	6sy0_E_DG4_DC5	BB2	BB07	71	0.30	BB07
005	6sy0_E_DC5_DA6	BBB	BB00	88	0.18	BB00
006	6sy0_E_DA6_DC7	B12	BB05	26	0.31	BB05
007	6sy0_E_DC7_DC8	BBB	BB01	27	0.34	BB01
008	6sy0_E_DC8_DT9	NAN	NANT	0	0.48	AA02
009	6sy0_E_DT9_DA10	A-B	AB01	18	0.22	AB01
010	6sy0_E_DA10_DG11	BBB	BB01	50	0.34	BB01
011	6sy0_E_DG11_DG12	B12	BB04	31	0.20	BB04
012	6sy0_E_DG12_DT13	BBB	BB01	65	0.24	BB01
013	6sy0_E_DT13_DG14	B12	BB04	49	0.38	BB04
014	6sy0_E_DG14_DC15	B-A	BA17	75	0.36	BA17
015	6sy0_E_DC15_DA16	A-B	AB03	77	0.24	AB03
016	6sy0_E_DA16_DC17	miB	BB15	70	0.20	BB15
017	6sy0_E_DC17_DC18	B12	BB05	48	0.31	BB05
018	6sy0_F_DG1_DG2	B12	BB04	43	0.35	BB04
019	6sy0_F_DG2_DT3	BBB	BB01	31	0.20	BB01
020	6sy0_F_DT3_DG4	B12	BB04	61	0.26	BB04
021	6sy0_F_DG4_DC5	B12	BB04	23	0.61	BB04
022	6sy0_F_DC5_DA6	NAN	NANT	0	0.41	BB07
023	6sy0_F_DA6_DC7	NAN	NANT	0	0.37	BB05
024	6sy0_F_DC7_DC8	BBB	BB01	26	0.36	BB01
025	6sy0_F_DC8_DT9	BBB	BB00	33	0.29	BB00
026	6sy0_F_DT9_DA10	BBB	BB00	64	0.35	BB00
027	6sy0_F_DA10_DG11	B-A	BA05	44	0.23	BA05
028	6sy0_F_DG11_DG12	BBB	BB01	61	0.21	BB01
029	6sy0_F_DG12_DT13	BBB	BB00	72	0.21	BB00
030	6sy0_F_DT13_DG14	B12	BB04	67	0.23	BB04
031	6sy0_F_DG14_DC15	BBB	BB00	39	0.33	BB00
032	6sy0_F_DC15_DA16	B12	BB04	34	0.35	BB04
033	6sy0_F_DA16_DC17	BBB	BB00	82	0.16	BB00
034	6sy0_F_DC17_DC18	NAN	NANT	0	0.40	BA10
035	6sy0_G_DG1_DG2	BBB	BB00	67	0.31	BB00
036	6sy0_G_DG2_DT3	BBB	BB00	74	0.29	BB00
037	6sy0_G_DT3_DG4	B12	BB04	64	0.33	BB04
038	6sy0_G_DG4_DC5	BB2	BB07	57	0.31	BB07
039	6sy0_G_DC5_DA6	BBB	BB00	83	0.18	BB00
040	6sy0_G_DA6_DC7	B12	BB05	30	0.32	BB05
041	6sy0_G_DC7_DC8	BBw	BB16	49	0.50	BB16
042	6sy0_G_DC8_DT9	B-A	BA01	11	0.20	BA01
043	6sy0_G_DT9_DA10	BBB	BB01	45	0.24	BB01
044	6sy0_G_DA10_DG11	BBB	BB01	43	0.29	BB01
045	6sy0_G_DG11_DG12	BBB	BB00	45	0.36	BB00
046	6sy0_G_DG12_DT13	BBB	BB00	76	0.23	BB00
047	6sy0_G_DT13_DG14	B12	BB04	69	0.38	BB04
048	6sy0_G_DG14_DC15	BB2	BB07	75	0.32	BB07
049	6sy0_G_DC15_DA16	NAN	NANT	0	0.29	BB00
050	6sy0_G_DA16_DC17	BBB	BB00	69	0.18	BB00
051	6sy0_G_DC17_DC18	BBB	BB01	66	0.19	BB01
052	6sy0_H_DG1_DG2	NAN	NANT	0	0.54	BB10
053	6sy0_H_DG2_DT3	NAN	NANT	0	0.55	AB02
054	6sy0_H_DT3_DG4	B12	BB04	63	0.45	BB04
055	6sy0_H_DG4_DC5	BBB	BB00	54	0.32	BB00
056	6sy0_H_DC5_DA6	NAN	NANT	0	0.54	BB08
057	6sy0_H_DA6_DC7	B12	BB05	28	0.40	BB05
058	6sy0_H_DC7_DC8	BBw	BB16	52	0.39	BB16
059	6sy0_H_DC8_DT9	B-A	BA01	6	0.35	BA01
060	6sy0_H_DT9_DA10	BBB	BB01	18	0.37	BB01
061	6sy0_H_DA10_DG11	BBB	BB01	72	0.19	BB01
062	6sy0_H_DG11_DG12	BBB	BB01	68	0.17	BB01
063	6sy0_H_DG12_DT13	BBB	BB00	80	0.22	BB00
064	6sy0_H_DT13_DG14	B12	BB04	58	0.27	BB04
065	6sy0_H_DG14_DC15	NAN	NANT	0	0.30	BB10
066	6sy0_H_DC15_DA16	NAN	NANT	0	0.54	BB11
067	6sy0_H_DA16_DC17	BBw	BB03	32	0.26	BB03
068	6sy0_H_DC17_DC18	BBw	BB03	23	0.39	BB03
069	6sy0_K_DG1_DG2	NAN	NANT	0	0.81	BB08
070	6sy0_K_DG2_DT3	BBB	BB00	79	0.32	BB00
071	6sy0_K_DT3_DG4	B12	BB04	75	0.33	BB04
072	6sy0_K_DG4_DC5	BB2	BB07	67	0.30	BB07
073	6sy0_K_DC5_DA6	BBB	BB00	82	0.17	BB00
074	6sy0_K_DA6_DC7	B12	BB05	19	0.36	BB05
075	6sy0_K_DC7_DC8	BBw	BB16	58	0.50	BB16
076	6sy0_K_DC8_DT9	B-A	BA01	27	0.21	BA01
077	6sy0_K_DT9_DA10	NAN	NANT	0	0.56	AB02
078	6sy0_K_DA10_DG11	B-A	BA05	55	0.31	BA05
079	6sy0_K_DG11_DG12	BBB	BB00	45	0.40	BB00
080	6sy0_K_DG12_DT13	BBB	BB00	77	0.20	BB00
081	6sy0_K_DT13_DG14	NAN	NANT	0	0.49	BB08
082	6sy0_K_DG14_DC15	NAN	NANT	0	0.35	BA08
083	6sy0_K_DC15_DA16	NAN	NANT	0	0.59	BB11
084	6sy0_K_DA16_DC17	BBB	BB00	79	0.23	BB00
085	6sy0_K_DC17_DC18	BBw	BB02	33	0.26	BB02
086	6sy0_L_DG1_DG2	miB	BB15	26	0.35	BB15
087	6sy0_L_DG2_DT3	BBB	BB00	80	0.19	BB00
088	6sy0_L_DT3_DG4	B12	BB04	59	0.36	BB04
089	6sy0_L_DG4_DC5	B12	BB04	70	0.34	BB04
090	6sy0_L_DC5_DA6	B12	BB04	86	0.22	BB04
091	6sy0_L_DA6_DC7	NAN	NANT	0	0.45	BB05
092	6sy0_L_DC7_DC8	BBw	BB16	42	0.49	BB16
093	6sy0_L_DC8_DT9	NAN	NANT	0	0.42	AA02
094	6sy0_L_DT9_DA10	A-B	AB02	90	0.30	AB02
095	6sy0_L_DA10_DG11	BBB	BB01	63	0.24	BB01
096	6sy0_L_DG11_DG12	BBB	BB00	60	0.26	BB00
097	6sy0_L_DG12_DT13	BBB	BB00	60	0.28	BB00
098	6sy0_L_DT13_DG14	B12	BB04	43	0.25	BB04
099	6sy0_L_DG14_DC15	NAN	NANT	0	0.55	BB13
100	6sy0_L_DC15_DA16	NAN	NANT	0	0.49	AB02
101	6sy0_L_DA16_DC17	NAN	NANT	0	0.61	AB2S
102	6sy0_L_DC17_DC18	NAN	NANT	0	0.32	BBS1

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 102 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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