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Conformers: ABBIImiBZICOPNSYNN
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SC14 G-hairpin

Results of the assignment of 130 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0016r8e-m10_A_DG1_DT2NANNANT00.72 OP25
0026r8e-m1_A_DG1_DT2NANNANT00.79 OP25
0036r8e-m2_A_DG1_DT2NANNANT00.75 OP25
0046r8e-m3_A_DG1_DT2NANNANT01.81 ZZS1
0056r8e-m4_A_DG1_DT2NANNANT00.77 OP25
0066r8e-m5_A_DG1_DT2NANNANT01.74 ZZS1
0076r8e-m6_A_DG1_DT2NANNANT01.75 ZZS1
0086r8e-m7_A_DG1_DT2NANNANT00.76 OP25
0096r8e-m8_A_DG1_DT2NANNANT00.60 OP25
0106r8e-m9_A_DG1_DT2NANNANT00.74 OP25
0116r8e-m10_A_DT2_DG3NANNANT01.67 IC03
0126r8e-m1_A_DT2_DG3NANNANT01.48 OP13
0136r8e-m2_A_DT2_DG3NANNANT01.71 IC03
0146r8e-m3_A_DT2_DG3NANNANT01.27 IC03
0156r8e-m4_A_DT2_DG3NANNANT01.47 OP13
0166r8e-m5_A_DT2_DG3NANNANT01.10 IC03
0176r8e-m6_A_DT2_DG3NANNANT01.24 IC03
0186r8e-m7_A_DT2_DG3NANNANT01.69 IC03
0196r8e-m8_A_DT2_DG3NANNANT01.52 IC03
0206r8e-m9_A_DT2_DG3NANNANT01.69 IC03
0216r8e-m10_A_DG3_DT4NANNANT00.93 OP04
0226r8e-m1_A_DG3_DT4NANNANT00.93 OP04
0236r8e-m2_A_DG3_DT4NANNANT00.91 OP04
0246r8e-m3_A_DG3_DT4NANNANT00.94 OP04
0256r8e-m4_A_DG3_DT4NANNANT00.93 OP04
0266r8e-m5_A_DG3_DT4NANNANT00.93 OP04
0276r8e-m6_A_DG3_DT4NANNANT00.94 OP04
0286r8e-m7_A_DG3_DT4NANNANT00.93 OP04
0296r8e-m8_A_DG3_DT4NANNANT01.53 AB04
0306r8e-m9_A_DG3_DT4NANNANT00.94 OP04
0316r8e-m10_A_DT4_DG5NANNANT00.94 IC06
0326r8e-m1_A_DT4_DG5NANNANT00.93 IC06
0336r8e-m2_A_DT4_DG5NANNANT00.93 IC06
0346r8e-m3_A_DT4_DG5NANNANT00.92 IC06
0356r8e-m4_A_DT4_DG5NANNANT00.94 IC06
0366r8e-m5_A_DT4_DG5NANNANT00.90 IC06
0376r8e-m6_A_DT4_DG5NANNANT00.90 IC06
0386r8e-m7_A_DT4_DG5NANNANT00.93 IC06
0396r8e-m8_A_DT4_DG5NANNANT00.93 IC06
0406r8e-m9_A_DT4_DG5NANNANT00.93 IC06
0416r8e-m10_A_DG5_DT6BBBBB00190.46 BB00
0426r8e-m1_A_DG5_DT6BBBBB00190.47 BB00
0436r8e-m2_A_DG5_DT6BBBBB00230.45 BB00
0446r8e-m3_A_DG5_DT6BBBBB00110.50 BB00
0456r8e-m4_A_DG5_DT6BBBBB00200.46 BB00
0466r8e-m5_A_DG5_DT6BBBBB00220.45 BB00
0476r8e-m6_A_DG5_DT6BBBBB00190.47 BB00
0486r8e-m7_A_DG5_DT6BBBBB00230.45 BB00
0496r8e-m8_A_DG5_DT6BBBBB00210.46 BB00
0506r8e-m9_A_DG5_DT6BBBBB00190.47 BB00
0516r8e-m10_A_DT6_DG7NANNANT00.47 ZZ1S
0526r8e-m1_A_DT6_DG7NANNANT00.46 ZZ1S
0536r8e-m2_A_DT6_DG7NANNANT00.47 ZZ1S
0546r8e-m3_A_DT6_DG7NANNANT00.45 ZZ1S
0556r8e-m4_A_DT6_DG7NANNANT00.45 ZZ1S
0566r8e-m5_A_DT6_DG7NANNANT00.46 ZZ1S
0576r8e-m6_A_DT6_DG7NANNANT00.46 ZZ1S
0586r8e-m7_A_DT6_DG7NANNANT00.46 ZZ1S
0596r8e-m8_A_DT6_DG7NANNANT00.46 ZZ1S
0606r8e-m9_A_DT6_DG7NANNANT00.46 ZZ1S
0616r8e-m10_A_DG7_DG8NANNANT00.47 IC04
0626r8e-m1_A_DG7_DG8NANNANT00.45 IC04
0636r8e-m2_A_DG7_DG8NANNANT00.85 BBS1
0646r8e-m3_A_DG7_DG8NANNANT00.70 IC03
0656r8e-m4_A_DG7_DG8NANNANT00.45 IC04
0666r8e-m5_A_DG7_DG8NANNANT00.48 IC04
0676r8e-m6_A_DG7_DG8NANNANT00.51 IC04
0686r8e-m7_A_DG7_DG8NANNANT00.49 IC04
0696r8e-m8_A_DG7_DG8NANNANT00.48 IC04
0706r8e-m9_A_DG7_DG8NANNANT00.44 IC04
0716r8e-m10_A_DG8_DG9NANNANT01.13 BB07
0726r8e-m1_A_DG8_DG9NANNANT01.15 BB07
0736r8e-m2_A_DG8_DG9NANNANT01.14 BB07
0746r8e-m3_A_DG8_DG9NANNANT01.28 BB07
0756r8e-m4_A_DG8_DG9NANNANT01.14 BB07
0766r8e-m5_A_DG8_DG9NANNANT01.16 BB07
0776r8e-m6_A_DG8_DG9NANNANT01.12 BB07
0786r8e-m7_A_DG8_DG9NANNANT01.12 BB07
0796r8e-m8_A_DG8_DG9NANNANT01.14 BB07
0806r8e-m9_A_DG8_DG9NANNANT01.16 BB07
0816r8e-m10_A_DG9_DT10NANNANT00.92 IC06
0826r8e-m1_A_DG9_DT10NANNANT01.03 BB16
0836r8e-m2_A_DG9_DT10NANNANT00.94 IC06
0846r8e-m3_A_DG9_DT10NANNANT00.91 IC06
0856r8e-m4_A_DG9_DT10NANNANT00.92 IC06
0866r8e-m5_A_DG9_DT10NANNANT00.92 IC06
0876r8e-m6_A_DG9_DT10NANNANT00.94 IC06
0886r8e-m7_A_DG9_DT10NANNANT00.88 IC06
0896r8e-m8_A_DG9_DT10NANNANT00.95 IC06
0906r8e-m9_A_DG9_DT10NANNANT00.90 IC06
0916r8e-m10_A_DT10_DG11NANNANT01.02 BB04
0926r8e-m1_A_DT10_DG11NANNANT00.78 OP22
0936r8e-m2_A_DT10_DG11NANNANT01.10 BB04
0946r8e-m3_A_DT10_DG11NANNANT01.08 BB04
0956r8e-m4_A_DT10_DG11NANNANT01.10 BB04
0966r8e-m5_A_DT10_DG11NANNANT01.06 BB04
0976r8e-m6_A_DT10_DG11NANNANT01.07 BB04
0986r8e-m7_A_DT10_DG11NANNANT00.78 OP22
0996r8e-m8_A_DT10_DG11NANNANT01.07 BB04
1006r8e-m9_A_DT10_DG11NANNANT01.07 BB04
1016r8e-m10_A_DG11_DT12NANNANT00.63 BA10
1026r8e-m1_A_DG11_DT12B-ABA01120.47 BA01
1036r8e-m2_A_DG11_DT12B-ABA05190.21 BA05
1046r8e-m3_A_DG11_DT12NANNANT00.43 BA05
1056r8e-m4_A_DG11_DT12B-ABA05320.24 BA05
1066r8e-m5_A_DG11_DT12NANNANT00.70 BA10
1076r8e-m6_A_DG11_DT12B-ABA05570.22 BA05
1086r8e-m7_A_DG11_DT12NANNANT00.48 BA05
1096r8e-m8_A_DG11_DT12NANNANT00.57 BA05
1106r8e-m9_A_DG11_DT12B-ABA01120.47 BA01
1116r8e-m10_A_DT12_DG13NANNANT01.98 OP23
1126r8e-m1_A_DT12_DG13NANNANT01.84 OP23
1136r8e-m2_A_DT12_DG13NANNANT01.85 OP23
1146r8e-m3_A_DT12_DG13NANNANT01.88 OP23
1156r8e-m4_A_DT12_DG13NANNANT01.81 OP23
1166r8e-m5_A_DT12_DG13NANNANT01.12 AA05
1176r8e-m6_A_DT12_DG13NANNANT01.62 AA10
1186r8e-m7_A_DT12_DG13NANNANT02.39 OP19
1196r8e-m8_A_DT12_DG13NANNANT01.10 AA05
1206r8e-m9_A_DT12_DG13NANNANT01.03 AA05
1216r8e-m10_A_DG13_DT14NANNANT01.40 IC06
1226r8e-m1_A_DG13_DT14NANNANT01.50 BB15
1236r8e-m2_A_DG13_DT14NANNANT01.48 BB15
1246r8e-m3_A_DG13_DT14NANNANT00.82 OP04
1256r8e-m4_A_DG13_DT14NANNANT01.41 BB15
1266r8e-m5_A_DG13_DT14NANNANT01.49 IC06
1276r8e-m6_A_DG13_DT14NANNANT00.54 OP04
1286r8e-m7_A_DG13_DT14NANNANT01.39 BB15
1296r8e-m8_A_DG13_DT14NANNANT01.71 OP18
1306r8e-m9_A_DG13_DT14NANNANT01.14 ZZ01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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