DNATCO v4.1: results

Crystal structure of the RBPJ-NOTCH1-NRARP ternary complex bound to DNA

Results of the assignment of 60 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	6py8_A_DT1_DT2	A-B	AB05	55	0.32	AB05
02	6py8_A_DT2_DG3	BBB	BB00	56	0.29	BB00
03	6py8_A_DG3_DA4	BBB	BB00	89	0.21	BB00
04	6py8_A_DA4_DC5	BBw	BB02	13	0.39	BB02
05	6py8_A_DC5_DT6	BBB	BB00	34	0.39	BB00
06	6py8_A_DT6_DG7	BBw	BB11	54	0.52	BB11
07	6py8_A_DG7_DT8	BBw	BB02	47	0.38	BB02
08	6py8_A_DT8_DG9	BBB	BB00	60	0.24	BB00
09	6py8_A_DG9_DG10	BBB	BB00	83	0.19	BB00
10	6py8_A_DG10_DG11	BBB	BB00	62	0.34	BB00
11	6py8_A_DG11_DA12	BBB	BB00	57	0.36	BB00
12	6py8_A_DA12_DA13	BBB	BB00	71	0.18	BB00
13	6py8_A_DA13_DA14	BBB	BB00	81	0.20	BB00
14	6py8_A_DA14_DG15	NAN	NANT	0	0.64	BB02
15	6py8_A_DG15_DA16	BBB	BB00	40	0.41	BB00
16	6py8_X_DT1_DT2	A-B	AB05	57	0.32	AB05
17	6py8_X_DT2_DG3	BBB	BB00	38	0.42	BB00
18	6py8_X_DG3_DA4	BBB	BB00	89	0.26	BB00
19	6py8_X_DA4_DC5	NAN	NANT	0	0.35	BB02
20	6py8_X_DC5_DT6	BBB	BB00	45	0.30	BB00
21	6py8_X_DT6_DG7	BBw	BB11	55	0.49	BB11
22	6py8_X_DG7_DT8	BBw	BB02	47	0.39	BB02
23	6py8_X_DT8_DG9	BBB	BB00	57	0.24	BB00
24	6py8_X_DG9_DG10	BBB	BB00	84	0.18	BB00
25	6py8_X_DG10_DG11	BBB	BB00	60	0.31	BB00
26	6py8_X_DG11_DA12	BBB	BB00	57	0.35	BB00
27	6py8_X_DA12_DA13	BBB	BB00	73	0.17	BB00
28	6py8_X_DA13_DA14	BBB	BB00	83	0.18	BB00
29	6py8_X_DA14_DG15	NAN	NANT	0	0.66	BB02
30	6py8_X_DG15_DA16	BBB	BB00	38	0.41	BB00
31	6py8_D_DA101_DA102	NAN	NANT	0	0.90	BB03
32	6py8_D_DA102_DT103	miB	BB13	72	0.24	BB13
33	6py8_D_DT103_DC104	NAN	NANT	0	0.70	BA10
34	6py8_D_DC104_DT105	BBB	BB01	13	0.35	BB01
35	6py8_D_DT105_DT106	BBB	BB01	69	0.16	BB01
36	6py8_D_DT106_DT107	NAN	NANT	0	0.36	BB02
37	6py8_D_DT107_DC108	NAN	NANT	0	0.48	BB05
38	6py8_D_DC108_DC109	BBB	BB00	29	0.45	BB00
39	6py8_D_DC109_DC110	BBB	BB00	77	0.25	BB00
40	6py8_D_DC110_DA111	B12	BB04	18	0.31	BB04
41	6py8_D_DA111_DC112	BBw	BB03	41	0.53	BB03
42	6py8_D_DC112_DA113	BBB	BB00	43	0.60	BB00
43	6py8_D_DA113_DG114	NAN	NANT	0	0.54	BA16
44	6py8_D_DG114_DT115	A-B	AB05	53	0.37	AB05
45	6py8_D_DT115_DC116	BBB	BB01	52	0.21	BB01
46	6py8_Y_DA101_DA102	NAN	NANT	0	0.93	BB03
47	6py8_Y_DA102_DT103	miB	BB13	70	0.23	BB13
48	6py8_Y_DT103_DC104	NAN	NANT	0	0.74	BA10
49	6py8_Y_DC104_DT105	BBB	BB01	13	0.34	BB01
50	6py8_Y_DT105_DT106	BBB	BB01	65	0.15	BB01
51	6py8_Y_DT106_DT107	BBw	BB02	15	0.31	BB02
52	6py8_Y_DT107_DC108	NAN	NANT	0	0.47	BB05
53	6py8_Y_DC108_DC109	BBB	BB00	27	0.45	BB00
54	6py8_Y_DC109_DC110	BBB	BB00	73	0.26	BB00
55	6py8_Y_DC110_DA111	B12	BB04	14	0.33	BB04
56	6py8_Y_DA111_DC112	BBw	BB03	60	0.46	BB03
57	6py8_Y_DC112_DA113	BBB	BB00	37	0.63	BB00
58	6py8_Y_DA113_DG114	B-A	BA16	44	0.39	BA16
59	6py8_Y_DG114_DT115	A-B	AB05	60	0.35	AB05
60	6py8_Y_DT115_DC116	BBB	BB01	49	0.22	BB01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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Results of the assignment of 60 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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