DNATCO v4.1: results

Crystal structure of human RPP20-RPP25 proteins in complex with the P3 domain of lncRNA RMRP

Results of the assignment of 94 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	6lt7_C_G19_G20	AAA	AA00	52	0.27	AA00
02	6lt7_C_G20_U21	AAA	AA04	90	0.20	AA04
03	6lt7_C_U21_C22	AAA	AA08	21	0.33	AA08
04	6lt7_C_C22_C23	AAA	AA08	40	0.23	AA08
05	6lt7_C_C23_U24	AAA	AA00	60	0.20	AA00
06	6lt7_C_U24_A25	AAA	AA00	58	0.15	AA00
07	6lt7_C_A25_G26	AAA	AA08	57	0.20	AA08
08	6lt7_C_G26_G27	AAA	AA00	67	0.18	AA00
09	6lt7_C_G27_C28	AAA	AA00	74	0.27	AA00
10	6lt7_C_C28_U29	NAN	NANT	0	0.73	OP28
11	6lt7_C_U29_A30	NAN	NANT	0	0.87	OP17
12	6lt7_C_A30_C31	NAN	NANT	0	0.83	OP12
13	6lt7_C_C31_A32	NAN	NANT	0	1.77	BB1S
14	6lt7_C_A32_C33	NAN	NANT	0	1.99	OP09
15	6lt7_C_C33_A34	NAN	NANT	0	0.62	OP20
16	6lt7_C_A34_C35	NAN	NANT	0	0.63	OP21
17	6lt7_C_C35_U36	NAN	NANT	0	1.91	OP19
18	6lt7_C_U36_G37	NAN	NANT	0	1.81	OP31
19	6lt7_C_G37_A38	AAA	AA00	61	0.25	AA00
20	6lt7_C_A38_G39	AAA	AA00	71	0.14	AA00
21	6lt7_C_G39_G40	AAw	AA10	82	0.29	AA10
22	6lt7_C_G40_A41	AAA	AA08	83	0.22	AA08
23	6lt7_C_A41_C42	AAA	AA08	94	0.14	AA08
24	6lt7_C_C42_U43	NAN	NANT	0	1.07	AB1S
25	6lt7_C_U45_G46	BBw	BB16	37	0.49	BB16
26	6lt7_C_G46_U47	NAN	NANT	0	0.88	OP13
27	6lt7_C_U47_U48	OPN	OP11	21	0.71	OP11
28	6lt7_C_U48_C49	AAA	AA00	66	0.16	AA00
29	6lt7_C_C49_C50	AAA	AA00	92	0.14	AA00
30	6lt7_C_C50_U51	AAA	AA00	86	0.15	AA00
31	6lt7_C_U51_C52	AAA	AA00	49	0.36	AA00
32	6lt7_C_C52_C53	OPN	OP06	53	0.60	OP06
33	6lt7_C_C53_C54	AAA	AA04	55	0.44	AA04
34	6lt7_C_C54_C55	AAA	AA00	81	0.26	AA00
35	6lt7_C_C55_U56	NAN	NANT	0	0.90	OP30
36	6lt7_C_U56_U57	NAN	NANT	0	1.08	ZZ2S
37	6lt7_C_U57_U58	NAN	NANT	0	0.68	OP07
38	6lt7_C_U58_C59	AAA	AA08	14	0.65	AA08
39	6lt7_C_C59_C60	NAN	NANT	0	2.15	OP09
40	6lt7_C_C60_G61	OPN	OP14	24	0.58	OP14
41	6lt7_C_G61_C62	AAA	AA00	65	0.13	AA00
42	6lt7_C_C62_C63	AAA	AA08	82	0.18	AA08
43	6lt7_C_C63_U64	AAA	AA00	81	0.24	AA00
44	6lt7_C_U64_A65	AAA	AA08	66	0.20	AA08
45	6lt7_C_A65_G66	AAA	AA00	57	0.16	AA00
46	6lt7_C_G66_G67	AAA	AA00	57	0.28	AA00
47	6lt7_C_G67_G68	NAN	NANT	0	0.52	AA01
48	6lt7_F_G19_G20	AAA	AA00	64	0.23	AA00
49	6lt7_F_G20_U21	AAA	AA00	63	0.23	AA00
50	6lt7_F_U21_C22	AAA	AA04	66	0.29	AA04
51	6lt7_F_C22_C23	AAA	AA08	64	0.22	AA08
52	6lt7_F_C23_U24	AAA	AA08	77	0.18	AA08
53	6lt7_F_U24_A25	AAA	AA00	83	0.15	AA00
54	6lt7_F_A25_G26	AAw	AA06	11	0.31	AA06
55	6lt7_F_G26_G27	AAA	AA08	55	0.22	AA08
56	6lt7_F_G27_C28	AAA	AA00	56	0.25	AA00
57	6lt7_F_C28_U29	NAN	NANT	0	0.71	OP28
58	6lt7_F_U29_A30	NAN	NANT	0	0.86	OP17
59	6lt7_F_A30_C31	NAN	NANT	0	0.83	OP12
60	6lt7_F_C31_A32	NAN	NANT	0	1.78	BB1S
61	6lt7_F_A32_C33	NAN	NANT	0	1.99	OP09
62	6lt7_F_C33_A34	NAN	NANT	0	0.64	OP20
63	6lt7_F_A34_C35	NAN	NANT	0	0.63	OP21
64	6lt7_F_C35_U36	NAN	NANT	0	1.91	OP19
65	6lt7_F_U36_G37	NAN	NANT	0	1.81	OP31
66	6lt7_F_G37_A38	AAA	AA00	52	0.26	AA00
67	6lt7_F_A38_G39	AAA	AA08	85	0.15	AA08
68	6lt7_F_G39_G40	AAA	AA04	81	0.14	AA04
69	6lt7_F_G40_A41	AAA	AA08	76	0.18	AA08
70	6lt7_F_A41_C42	AAA	AA08	89	0.19	AA08
71	6lt7_F_C42_U43	NAN	NANT	0	1.15	AB1S
72	6lt7_F_U45_G46	BBw	BB16	47	0.40	BB16
73	6lt7_F_G46_U47	NAN	NANT	0	0.90	OP13
74	6lt7_F_U47_U48	OPN	OP11	23	0.72	OP11
75	6lt7_F_U48_C49	AAA	AA00	68	0.16	AA00
76	6lt7_F_C49_C50	AAA	AA00	84	0.11	AA00
77	6lt7_F_C50_U51	AAA	AA00	64	0.16	AA00
78	6lt7_F_U51_C52	AAA	AA00	40	0.34	AA00
79	6lt7_F_C52_C53	NAN	NANT	0	0.64	OP06
80	6lt7_F_C53_C54	AAA	AA00	13	0.36	AA00
81	6lt7_F_C54_C55	AAA	AA00	84	0.25	AA00
82	6lt7_F_C55_U56	NAN	NANT	0	2.42	OP07
83	6lt7_F_U56_U57	NAN	NANT	0	1.57	AA04
84	6lt7_F_U57_U58	NAN	NANT	0	1.48	OP16
85	6lt7_F_U58_C59	NAN	NANT	0	0.95	AB02
86	6lt7_F_C59_C60	NAN	NANT	0	1.87	OP04
87	6lt7_F_C60_G61	NAN	NANT	0	0.71	OP13
88	6lt7_F_G61_C62	AAA	AA08	81	0.23	AA08
89	6lt7_F_C62_C63	AAA	AA08	77	0.19	AA08
90	6lt7_F_C63_U64	NAN	NANT	0	0.38	AA01
91	6lt7_F_U64_A65	NAN	NANT	0	0.46	AA01
92	6lt7_F_A65_G66	AAA	AA08	46	0.25	AA08
93	6lt7_F_G66_G67	AAA	AA00	42	0.27	AA00
94	6lt7_F_G67_G68	NAN	NANT	0	0.54	AA01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 94 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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