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Conformers: ABBIImiBZICOPNSYNN
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The Human Telomeric Nucleosome Displays Distinct Structural and Dynamic Properties

Results of the assignment of 288 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0016le9_I_DA-72_DT-71NANNANT00.84 BB17
0026le9_I_DT-71_DC-70NANNANT00.43 BA08
0036le9_I_DC-70_DA-69NANNANT00.65 IC04
0046le9_I_DA-69_DC-68BBBBB00380.29 BB00
0056le9_I_DC-68_DC-67NANNANT00.44 BA10
0066le9_I_DC-67_DC-66BBBBB00410.37 BB00
0076le9_I_DC-66_DT-65B12BB04300.30 BB04
0086le9_I_DT-65_DA-64B12BB04750.25 BB04
0096le9_I_DA-64_DA-63NANNANT00.35 BB10
0106le9_I_DA-63_DC-62NANNANT00.50 BA08
0116le9_I_DC-62_DC-61NANNANT00.50 AA09
0126le9_I_DC-61_DC-60NANNANT00.38 BA08
0136le9_I_DC-60_DT-59NANNANT00.65 AA04
0146le9_I_DT-59_DA-58BBBBB00410.50 BB00
0156le9_I_DA-58_DA-57miBBB10620.45 BB10
0166le9_I_DA-57_DC-56BBBBB00480.34 BB00
0176le9_I_DC-56_DC-55B12BB04540.28 BB04
0186le9_I_DC-55_DC-54B12BB04170.38 BB04
0196le9_I_DC-54_DT-53BBBBB00370.54 BB00
0206le9_I_DT-53_DA-52BB2BB07450.31 BB07
0216le9_I_DA-52_DA-51B-ABA01170.34 BA01
0226le9_I_DA-51_DC-50NANNANT00.54 AB03
0236le9_I_DC-50_DC-49BBBBB00350.19 BB00
0246le9_I_DC-49_DC-48B12BB04560.34 BB04
0256le9_I_DC-48_DT-47B12BB04380.23 BB04
0266le9_I_DT-47_DA-46B12BB04210.52 BB04
0276le9_I_DA-46_DA-45B12BB04270.27 BB04
0286le9_I_DA-45_DC-44B12BB04680.27 BB04
0296le9_I_DC-44_DC-43BBBBB00520.16 BB00
0306le9_I_DC-43_DC-42B12BB04120.35 BB04
0316le9_I_DC-42_DT-41NANNANT00.60 BB13
0326le9_I_DT-41_DA-40AAAAA00270.50 AA00
0336le9_I_DA-40_DA-39NANNANT00.54 AB05
0346le9_I_DA-39_DC-38miBBB15540.42 BB15
0356le9_I_DC-38_DC-37B12BB04570.18 BB04
0366le9_I_DC-37_DC-36B12BB04710.26 BB04
0376le9_I_DC-36_DT-35BB2BB07830.20 BB07
0386le9_I_DT-35_DA-34BBBBB00700.27 BB00
0396le9_I_DA-34_DA-33B12BB04770.22 BB04
0406le9_I_DA-33_DC-32BBBBB00800.14 BB00
0416le9_I_DC-32_DC-31BBBBB00810.20 BB00
0426le9_I_DC-31_DC-30NANNANT00.52 BA08
0436le9_I_DC-30_DT-29NANNANT00.53 AA08
0446le9_I_DT-29_DA-28A-BAB03560.39 AB03
0456le9_I_DA-28_DA-27miBBB15400.48 BB15
0466le9_I_DA-27_DC-26BB2BB0760.45 BB07
0476le9_I_DC-26_DC-25NANNANT00.32 BB10
0486le9_I_DC-25_DC-24BB2BB07420.19 BB07
0496le9_I_DC-24_DT-23B12BB04140.24 BB04
0506le9_I_DT-23_DA-22BBBBB00490.20 BB00
0516le9_I_DA-22_DA-21B-ABA08700.24 BA08
0526le9_I_DA-21_DC-20AAAAA00480.36 AA00
0536le9_I_DC-20_DC-19AAAAA00790.21 AA00
0546le9_I_DC-19_DC-18A-BAB05320.29 AB05
0556le9_I_DC-18_DT-17A-BAB03190.36 AB03
0566le9_I_DT-17_DA-16BB2BB07420.44 BB07
0576le9_I_DA-16_DA-15BB2BB07240.47 BB07
0586le9_I_DA-15_DC-14BBBBB00630.31 BB00
0596le9_I_DC-14_DC-13B12BB04690.13 BB04
0606le9_I_DC-13_DC-12NANNANT00.36 BB10
0616le9_I_DC-12_DT-11B12BB04100.43 BB04
0626le9_I_DT-11_DA-10B12BB04450.30 BB04
0636le9_I_DA-10_DA-9NANNANT00.33 BA08
0646le9_I_DA-9_DC-8NANNANT00.50 AB03
0656le9_I_DC-8_DC-7BBBBB00140.27 BB00
0666le9_I_DC-7_DC-6NANNANT00.35 BB07
0676le9_I_DC-6_DT-5B-ABA05550.38 BA05
0686le9_I_DT-5_DA-4BB2BB07320.29 BB07
0696le9_I_DA-4_DA-3BBBBB00800.18 BB00
0706le9_I_DA-3_DC-2BBBBB00570.25 BB00
0716le9_I_DC-2_DC-1B-ABA08780.21 BA08
0726le9_I_DC-1_DC0A-BAB01380.22 AB01
0736le9_I_DC0_DT1BBBBB00450.38 BB00
0746le9_I_DT1_DA2B12BB04260.33 BB04
0756le9_I_DA2_DA3B12BB04830.22 BB04
0766le9_I_DA3_DC4B-ABA08160.43 BA08
0776le9_I_DC4_DC5A-BAB03860.15 AB03
0786le9_I_DC5_DC6BB2BB07100.35 BB07
0796le9_I_DC6_DT7NANNANT00.65 BB11
0806le9_I_DT7_DA8B12BB04210.45 BB04
0816le9_I_DA8_DA9B12BB04260.36 BB04
0826le9_I_DA9_DC10BBBBB01550.23 BB01
0836le9_I_DC10_DC11B-ABA05320.41 BA05
0846le9_I_DC11_DC12BBwBB16280.49 BB16
0856le9_I_DC12_DT13B12BB04490.37 BB04
0866le9_I_DT13_DA14BBBBB00550.33 BB00
0876le9_I_DA14_DA15B12BB04330.44 BB04
0886le9_I_DA15_DC16BBBBB00250.32 BB00
0896le9_I_DC16_DC17B12BB04410.33 BB04
0906le9_I_DC17_DC18BBBBB01630.17 BB01
0916le9_I_DC18_DT19NANNANT00.50 BB13
0926le9_I_DT19_DA20BBBBB00210.60 BB00
0936le9_I_DA20_DA21B-ABA01650.31 BA01
0946le9_I_DA21_DC22AAAAA00220.44 AA00
0956le9_I_DC22_DC23A-BAB01390.32 AB01
0966le9_I_DC23_DC24BBBBB00540.31 BB00
0976le9_I_DC24_DT25BBBBB00200.36 BB00
0986le9_I_DT25_DA26NANNANT00.66 BA17
0996le9_I_DA26_DA27BBBBB00930.12 BB00
1006le9_I_DA27_DC28B12BB04680.21 BB04
1016le9_I_DC28_DC29BBBBB00540.26 BB00
1026le9_I_DC29_DC30NANNANT00.64 BB10
1036le9_I_DC30_DT31BBBBB00120.58 BB00
1046le9_I_DT31_DA32NANNANT00.46 BB07
1056le9_I_DA32_DA33BBBBB0160.45 BB01
1066le9_I_DA33_DC34BBBBB00340.27 BB00
1076le9_I_DC34_DC35miBBB10140.59 BB10
1086le9_I_DC35_DC36A-BAB03420.23 AB03
1096le9_I_DC36_DT37BB2BB07250.27 BB07
1106le9_I_DT37_DA38BBBBB00450.38 BB00
1116le9_I_DA38_DA39BBBBB00520.35 BB00
1126le9_I_DA39_DC40BBBBB00560.24 BB00
1136le9_I_DC40_DC41B-ABA01580.26 BA01
1146le9_I_DC41_DC42A-BAB01630.26 AB01
1156le9_I_DC42_DT43BBBBB00120.34 BB00
1166le9_I_DT43_DA44NANNANT00.48 BA08
1176le9_I_DA44_DA45A-BAB01280.36 AB01
1186le9_I_DA45_DC46B12BB04580.29 BB04
1196le9_I_DC46_DC47NANNANT00.53 BA08
1206le9_I_DC47_DC48BBBBB00390.45 BB00
1216le9_I_DC48_DT49B12BB04640.29 BB04
1226le9_I_DT49_DA50BBBBB00570.30 BB00
1236le9_I_DA50_DA51miBBB10400.24 BB10
1246le9_I_DA51_DC52BBBBB01800.22 BB01
1256le9_I_DC52_DC53BBBBB00510.23 BB00
1266le9_I_DC53_DC54NANNANT00.42 BB00
1276le9_I_DC54_DT55miBBB10100.48 BB10
1286le9_I_DT55_DA56miBBB10450.60 BB10
1296le9_I_DA56_DA57B12BB04380.30 BB04
1306le9_I_DA57_DC58BBBBB00190.40 BB00
1316le9_I_DC58_DC59B12BB04490.20 BB04
1326le9_I_DC59_DC60BBBBB00680.21 BB00
1336le9_I_DC60_DT61NANNANT00.44 BB00
1346le9_I_DT61_DA62NANNANT00.60 BA17
1356le9_I_DA62_DA63NANNANT00.41 AB05
1366le9_I_DA63_DC64NANNANT00.56 BA08
1376le9_I_DC64_DC65NANNANT00.43 AB05
1386le9_I_DC65_DC66BBBBB00620.15 BB00
1396le9_I_DC66_DT67BBBBB01550.26 BB01
1406le9_I_DT67_DA68A-BAB03770.15 AB03
1416le9_I_DA68_DA69B12BB04330.26 BB04
1426le9_I_DA69_DG70BBBBB00100.53 BB00
1436le9_I_DG70_DA71NANNANT00.61 BB04
1446le9_I_DA71_DT72BBwBB03550.31 BB03
1456le9_J_DA-72_DT-71NANNANT00.75 BB03
1466le9_J_DT-71_DC-70BBBBB01600.35 BB01
1476le9_J_DC-70_DT-69NANNANT00.56 BB00
1486le9_J_DT-69_DT-68BBBBB00320.36 BB00
1496le9_J_DT-68_DA-67B12BB04320.28 BB04
1506le9_J_DA-67_DG-66B-ABA08680.20 BA08
1516le9_J_DG-66_DG-65A-BAB01170.36 AB01
1526le9_J_DG-65_DG-64B12BB04340.33 BB04
1536le9_J_DG-64_DT-63BBBBB01390.25 BB01
1546le9_J_DT-63_DT-62A-BAB03580.39 AB03
1556le9_J_DT-62_DA-61B-ABA05320.23 BA05
1566le9_J_DA-61_DG-60A-BAB05270.44 AB05
1576le9_J_DG-60_DG-59NANNANT00.26 BB04
1586le9_J_DG-59_DG-58BBBBB00280.48 BB00
1596le9_J_DG-58_DT-57NANNANT00.42 BB04
1606le9_J_DT-57_DT-56BBBBB00290.38 BB00
1616le9_J_DT-56_DA-55B12BB04280.38 BB04
1626le9_J_DA-55_DG-54B12BB04280.39 BB04
1636le9_J_DG-54_DG-53B12BB04480.42 BB04
1646le9_J_DG-53_DG-52miBBB10690.42 BB10
1656le9_J_DG-52_DT-51B-ABA01780.25 BA01
1666le9_J_DT-51_DT-50AAAAA02480.34 AA02
1676le9_J_DT-50_DA-49A-BAB01430.31 AB01
1686le9_J_DA-49_DG-48miBBB10720.25 BB10
1696le9_J_DG-48_DG-47B12BB04280.30 BB04
1706le9_J_DG-47_DG-46B12BB04120.31 BB04
1716le9_J_DG-46_DT-45B12BB04510.30 BB04
1726le9_J_DT-45_DT-44B12BB04630.26 BB04
1736le9_J_DT-44_DA-43B12BB04340.31 BB04
1746le9_J_DA-43_DG-42miBBB15740.25 BB15
1756le9_J_DG-42_DG-41BBBBB00510.41 BB00
1766le9_J_DG-41_DG-40B12BB04290.38 BB04
1776le9_J_DG-40_DT-39BBBBB01380.22 BB01
1786le9_J_DT-39_DT-38B-ABA05380.21 BA05
1796le9_J_DT-38_DA-37A-BAB01400.28 AB01
1806le9_J_DA-37_DG-36B12BB04520.39 BB04
1816le9_J_DG-36_DG-35B12BB04430.44 BB04
1826le9_J_DG-35_DG-34BBBBB00810.25 BB00
1836le9_J_DG-34_DT-33B-ABA08250.35 BA08
1846le9_J_DT-33_DT-32NANNANT00.54 BA09
1856le9_J_DT-32_DA-31AAAAA00550.37 AA00
1866le9_J_DA-31_DG-30A-BAB05590.34 AB05
1876le9_J_DG-30_DG-29NANNANT00.42 BB00
1886le9_J_DG-29_DG-28B12BB04440.55 BB04
1896le9_J_DG-28_DT-27BBBBB00410.41 BB00
1906le9_J_DT-27_DT-26BB2BB07370.33 BB07
1916le9_J_DT-26_DA-25BBBBB00700.23 BB00
1926le9_J_DA-25_DG-24NANNANT00.41 BA08
1936le9_J_DG-24_DG-23A-BAB05490.27 AB05
1946le9_J_DG-23_DG-22miBBB1590.32 BB15
1956le9_J_DG-22_DT-21A-BAB03600.40 AB03
1966le9_J_DT-21_DT-20NANNANT00.72 BB12
1976le9_J_DT-20_DA-19A-BAB04770.27 AB04
1986le9_J_DA-19_DG-18NANNANT00.55 BB10
1996le9_J_DG-18_DG-17miBBB12300.42 BB12
2006le9_J_DG-17_DG-16NANNANT00.86 AB02
2016le9_J_DG-16_DT-15BB2BB07450.34 BB07
2026le9_J_DT-15_DT-14BBBBB01440.35 BB01
2036le9_J_DT-14_DA-13BBBBB00470.35 BB00
2046le9_J_DA-13_DG-12BBBBB00790.22 BB00
2056le9_J_DG-12_DG-11NANNANT00.40 AB03
2066le9_J_DG-11_DG-10BBBBB00590.36 BB00
2076le9_J_DG-10_DT-9B-ABA08760.38 BA08
2086le9_J_DT-9_DT-8AAAAA09500.28 AA09
2096le9_J_DT-8_DA-7NANNANT00.39 AB01
2106le9_J_DA-7_DG-6B12BB04210.28 BB04
2116le9_J_DG-6_DG-5BBBBB00350.42 BB00
2126le9_J_DG-5_DG-4BB2BB07280.30 BB07
2136le9_J_DG-4_DT-3BBBBB00530.26 BB00
2146le9_J_DT-3_DT-2BBBBB01220.27 BB01
2156le9_J_DT-2_DA-1A-BAB03830.26 AB03
2166le9_J_DA-1_DG0BBBBB00630.26 BB00
2176le9_J_DG0_DG1B12BB04370.28 BB04
2186le9_J_DG1_DG2BBBBB00520.27 BB00
2196le9_J_DG2_DT3B-ABA01640.37 BA01
2206le9_J_DT3_DT4A-BAB05180.52 AB05
2216le9_J_DT4_DA5NANNANT00.55 BB10
2226le9_J_DA5_DG6BB2BB07330.33 BB07
2236le9_J_DG6_DG7NANNANT00.44 BB00
2246le9_J_DG7_DG8B12BB04160.40 BB04
2256le9_J_DG8_DT9BBBBB00770.32 BB00
2266le9_J_DT9_DT10BBBBB01120.39 BB01
2276le9_J_DT10_DA11A-BAB03700.26 AB03
2286le9_J_DA11_DG12BBBBB00570.31 BB00
2296le9_J_DG12_DG13miBBB10700.36 BB10
2306le9_J_DG13_DG14NANNANT00.54 BB12
2316le9_J_DG14_DT15NANNANT00.97 BB02
2326le9_J_DT15_DT16NANNANT00.47 BB04
2336le9_J_DT16_DA17BB2BB07680.11 BB07
2346le9_J_DA17_DG18BBBBB00710.27 BB00
2356le9_J_DG18_DG19B-ABA08560.25 BA08
2366le9_J_DG19_DG20NANNANT00.50 AB03
2376le9_J_DG20_DT21B-ABA10350.30 BA10
2386le9_J_DT21_DT22AAAAA08580.36 AA08
2396le9_J_DT22_DA23A-BAB05410.29 AB05
2406le9_J_DA23_DG24BBBBB00490.38 BB00
2416le9_J_DG24_DG25B12BB04190.47 BB04
2426le9_J_DG25_DG26BB2BB07480.46 BB07
2436le9_J_DG26_DT27NANNANT00.21 BB15
2446le9_J_DT27_DT28B12BB04530.27 BB04
2456le9_J_DT28_DA29BBBBB00570.28 BB00
2466le9_J_DA29_DG30NANNANT00.63 BB04
2476le9_J_DG30_DG31BBBBB00230.66 BB00
2486le9_J_DG31_DG32miBBB10230.65 BB10
2496le9_J_DG32_DT33BBBBB00490.29 BB00
2506le9_J_DT33_DT34BBBBB00450.28 BB00
2516le9_J_DT34_DA35BBBBB00150.31 BB00
2526le9_J_DA35_DG36B12BB04300.40 BB04
2536le9_J_DG36_DG37B12BB04610.25 BB04
2546le9_J_DG37_DG38B-ABA0180.49 BA01
2556le9_J_DG38_DT39A-BAB01200.39 AB01
2566le9_J_DT39_DT40B-ABA01230.31 BA01
2576le9_J_DT40_DA41AAAAA09120.32 AA09
2586le9_J_DA41_DG42A-BAB05640.19 AB05
2596le9_J_DG42_DG43B12BB04260.40 BB04
2606le9_J_DG43_DG44B-ABA08760.19 BA08
2616le9_J_DG44_DT45A-BAB05200.47 AB05
2626le9_J_DT45_DT46BBBBB00550.24 BB00
2636le9_J_DT46_DA47B12BB04800.21 BB04
2646le9_J_DA47_DG48BBBBB00480.28 BB00
2656le9_J_DG48_DG49B12BB04660.33 BB04
2666le9_J_DG49_DG50BBBBB00840.31 BB00
2676le9_J_DG50_DT51B-ABA05360.32 BA05
2686le9_J_DT51_DT52A-BAB03820.22 AB03
2696le9_J_DT52_DA53BBBBB00170.29 BB00
2706le9_J_DA53_DG54NANNANT00.52 BB04
2716le9_J_DG54_DG55BBBBB00480.42 BB00
2726le9_J_DG55_DG56BB2BB07460.46 BB07
2736le9_J_DG56_DT57B12BB04750.24 BB04
2746le9_J_DT57_DT58NANNANT00.46 BA08
2756le9_J_DT58_DA59BBBBB01520.19 BB01
2766le9_J_DA59_DG60BBBBB00590.32 BB00
2776le9_J_DG60_DG61BBBBB00760.29 BB00
2786le9_J_DG61_DG62B-ABA05130.38 BA05
2796le9_J_DG62_DT63A-BAB03730.25 AB03
2806le9_J_DT63_DT64B-ABA01100.23 BA01
2816le9_J_DT64_DA65A-BAB01180.32 AB01
2826le9_J_DA65_DG66BBBBB00150.30 BB00
2836le9_J_DG66_DG67BBBBB00440.29 BB00
2846le9_J_DG67_DG68B12BB05390.35 BB05
2856le9_J_DG68_DT69NANNANT00.50 BB15
2866le9_J_DT69_DG70NANNANT00.39 BB00
2876le9_J_DG70_DA71NANNANT00.44 AB03
2886le9_J_DA71_DT72NANNANT00.78 BB03

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

Browse conformers

Return up to random steps in PDB structures ( include large structures )

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