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Conformers: ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
Crystal Structure of FOXO1-DBD homodimer bound to a palindromic DNA sequence

Results of the assignment of 114 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0016lbi_A_DA1_DC2BBBBB00670.19 BB00
0026lbi_A_DC2_DC3B-ABA01320.22 BA01
0036lbi_A_DC3_DG4A-BAB01230.22 AB01
0046lbi_A_DG4_DT5BBBBB01550.21 BB01
0056lbi_A_DT5_DA6BBBBB01870.14 BB01
0066lbi_A_DA6_DA7BBBBB01360.21 BB01
0076lbi_A_DA7_DA8A-BAB03920.26 AB03
0086lbi_A_DA8_DC9BBBBB01650.25 BB01
0096lbi_A_DC9_DA10BBBBB00170.32 BB00
0106lbi_A_DA10_DT11BBBBB01650.17 BB01
0116lbi_A_DT11_DG12BBwBB02460.27 BB02
0126lbi_A_DG12_DT13BBBBB00320.27 BB00
0136lbi_A_DT13_DT14BBwBB02830.19 BB02
0146lbi_A_DT14_DT15BBBBB00610.22 BB00
0156lbi_A_DT15_DA16BBBBB01780.14 BB01
0166lbi_A_DA16_DC17BBBBB00480.22 BB00
0176lbi_A_DC17_DG18B12BB04790.20 BB04
0186lbi_A_DG18_DG19BBBBB00940.16 BB00
0196lbi_A_DG19_DT20miBBB15640.23 BB15
0206lbi_B_DA1_DC2BBBBB01510.19 BB01
0216lbi_B_DC2_DC3BBBBB01610.16 BB01
0226lbi_B_DC3_DG4BBBBB01410.27 BB01
0236lbi_B_DG4_DT5BBBBB01260.25 BB01
0246lbi_B_DT5_DA6BBBBB01640.19 BB01
0256lbi_B_DA6_DA7BBBBB00800.14 BB00
0266lbi_B_DA7_DA8B12BB04860.15 BB04
0276lbi_B_DA8_DC9BBBBB01360.26 BB01
0286lbi_B_DC9_DA10BBBBB01420.29 BB01
0296lbi_B_DA10_DT11BBBBB00740.18 BB00
0306lbi_B_DT11_DG12BBwBB02610.26 BB02
0316lbi_B_DG12_DT13BBBBB00610.28 BB00
0326lbi_B_DT13_DT14BBwBB02810.17 BB02
0336lbi_B_DT14_DT15BBBBB00750.16 BB00
0346lbi_B_DT15_DA16BBBBB00650.18 BB00
0356lbi_B_DA16_DC17BBBBB00440.27 BB00
0366lbi_B_DC17_DG18B12BB04750.17 BB04
0376lbi_B_DG18_DG19BBBBB00910.11 BB00
0386lbi_B_DG19_DT20BBwBB02230.24 BB02
0396lbi_E_DA1_DC2BBBBB00640.19 BB00
0406lbi_E_DC2_DC3BBBBB01540.23 BB01
0416lbi_E_DC3_DG4BBBBB00420.31 BB00
0426lbi_E_DG4_DT5BBBBB01800.18 BB01
0436lbi_E_DT5_DA6BBBBB00320.22 BB00
0446lbi_E_DA6_DA7BBBBB01700.18 BB01
0456lbi_E_DA7_DA8B12BB04150.19 BB04
0466lbi_E_DA8_DC9BBBBB01780.19 BB01
0476lbi_E_DC9_DA10BBBBB00570.23 BB00
0486lbi_E_DA10_DT11BBBBB00840.17 BB00
0496lbi_E_DT11_DG12BBwBB02480.24 BB02
0506lbi_E_DG12_DT13BBBBB00710.22 BB00
0516lbi_E_DT13_DT14BBwBB02720.17 BB02
0526lbi_E_DT14_DT15BBBBB00790.17 BB00
0536lbi_E_DT15_DA16BBBBB00730.19 BB00
0546lbi_E_DA16_DC17BBBBB00770.23 BB00
0556lbi_E_DC17_DG18B12BB04910.16 BB04
0566lbi_E_DG18_DG19BBBBB00780.15 BB00
0576lbi_E_DG19_DT20BBBBB00210.33 BB00
0586lbi_F_DA1_DC2BBBBB00490.19 BB00
0596lbi_F_DC2_DC3BBBBB01610.18 BB01
0606lbi_F_DC3_DG4BBBBB01590.30 BB01
0616lbi_F_DG4_DT5BBBBB01560.20 BB01
0626lbi_F_DT5_DA6BBBBB01630.19 BB01
0636lbi_F_DA6_DA7BBBBB01720.17 BB01
0646lbi_F_DA7_DA8B12BB04610.18 BB04
0656lbi_F_DA8_DC9BBBBB01850.20 BB01
0666lbi_F_DC9_DA10BBBBB00530.32 BB00
0676lbi_F_DA10_DT11BBBBB00740.20 BB00
0686lbi_F_DT11_DG12BBwBB02510.29 BB02
0696lbi_F_DG12_DT13BBBBB00720.20 BB00
0706lbi_F_DT13_DT14BBwBB02800.19 BB02
0716lbi_F_DT14_DT15BBBBB00580.22 BB00
0726lbi_F_DT15_DA16BBBBB00530.25 BB00
0736lbi_F_DA16_DC17BBBBB00570.26 BB00
0746lbi_F_DC17_DG18B12BB04810.23 BB04
0756lbi_F_DG18_DG19BBBBB00760.21 BB00
0766lbi_F_DG19_DT20BBBBB00570.22 BB00
0776lbi_I_DA1_DC2BBBBB00180.38 BB00
0786lbi_I_DC2_DC3B-ABA05720.26 BA05
0796lbi_I_DC3_DG4A-BAB03760.22 AB03
0806lbi_I_DG4_DT5BBBBB01230.22 BB01
0816lbi_I_DT5_DA6BBBBB01590.22 BB01
0826lbi_I_DA6_DA7B-ABA05770.21 BA05
0836lbi_I_DA7_DA8A-BAB03810.36 AB03
0846lbi_I_DA8_DC9BBBBB00640.23 BB00
0856lbi_I_DC9_DA10BBBBB00520.34 BB00
0866lbi_I_DA10_DT11BBBBB00740.15 BB00
0876lbi_I_DT11_DG12BBwBB02290.28 BB02
0886lbi_I_DG12_DT13BBBBB00530.28 BB00
0896lbi_I_DT13_DT14BBwBB02790.16 BB02
0906lbi_I_DT14_DT15BBBBB00770.18 BB00
0916lbi_I_DT15_DA16BBBBB00760.18 BB00
0926lbi_I_DA16_DC17BBBBB00750.27 BB00
0936lbi_I_DC17_DG18B12BB04750.20 BB04
0946lbi_I_DG18_DG19BBBBB00810.17 BB00
0956lbi_I_DG19_DT20miBBB15790.22 BB15
0966lbi_J_DA1_DC2BBBBB00350.22 BB00
0976lbi_J_DC2_DC3BBBBB01700.17 BB01
0986lbi_J_DC3_DG4BBBBB00420.24 BB00
0996lbi_J_DG4_DT5BBBBB01470.23 BB01
1006lbi_J_DT5_DA6BBBBB01750.16 BB01
1016lbi_J_DA6_DA7BBBBB00670.18 BB00
1026lbi_J_DA7_DA8B12BB04600.14 BB04
1036lbi_J_DA8_DC9BBBBB01750.23 BB01
1046lbi_J_DC9_DA10BBBBB01610.30 BB01
1056lbi_J_DA10_DT11BBBBB00740.18 BB00
1066lbi_J_DT11_DG12BBwBB02560.26 BB02
1076lbi_J_DG12_DT13BBBBB00760.21 BB00
1086lbi_J_DT13_DT14BBwBB02630.20 BB02
1096lbi_J_DT14_DT15BBBBB01460.27 BB01
1106lbi_J_DT15_DA16BBBBB01790.13 BB01
1116lbi_J_DA16_DC17BBBBB00740.19 BB00
1126lbi_J_DC17_DG18B12BB04830.23 BB04
1136lbi_J_DG18_DG19BBBBB00840.23 BB00
1146lbi_J_DG19_DT20B12BB04110.38 BB04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

Browse conformers

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