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Conformers: ABBIImiBZICOPNSYNN
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The Human Telomeric Nucleosome Displays Distinct Structural and Dynamic Properties

Results of the assignment of 288 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0016l9h_I_DA-72_DT-71NANNANT00.85 BB17
0026l9h_I_DT-71_DC-70B-ABA05100.49 BA05
0036l9h_I_DC-70_DT-69NANNANT00.56 IC04
0046l9h_I_DT-69_DT-68BBBBB00530.28 BB00
0056l9h_I_DT-68_DA-67NANNANT00.56 BB08
0066l9h_I_DA-67_DG-66BBBBB00540.37 BB00
0076l9h_I_DG-66_DG-65BB2BB07220.29 BB07
0086l9h_I_DG-65_DG-64B12BB04680.28 BB04
0096l9h_I_DG-64_DT-63B-ABA0580.27 BA05
0106l9h_I_DT-63_DT-62BBBBB0190.46 BB01
0116l9h_I_DT-62_DA-61B-ABA05290.31 BA05
0126l9h_I_DA-61_DG-60A-BAB03800.17 AB03
0136l9h_I_DG-60_DG-59BBBBB01100.45 BB01
0146l9h_I_DG-59_DG-58NANNANT00.43 BB04
0156l9h_I_DG-58_DT-57BBBBB00130.35 BB00
0166l9h_I_DT-57_DT-56B12BB04450.32 BB04
0176l9h_I_DT-56_DA-55B12BB04310.40 BB04
0186l9h_I_DA-55_DG-54NANNANT00.63 BB04
0196l9h_I_DG-54_DG-53BBBBB00490.64 BB00
0206l9h_I_DG-53_DG-52BB2BB07400.38 BB07
0216l9h_I_DG-52_DT-51NANNANT00.39 BA05
0226l9h_I_DT-51_DT-50AAAAA08800.20 AA08
0236l9h_I_DT-50_DA-49A-BAB05350.28 AB05
0246l9h_I_DA-49_DG-48BBBBB00220.35 BB00
0256l9h_I_DG-48_DG-47NANNANT00.72 BB10
0266l9h_I_DG-47_DG-46BBBBB00350.41 BB00
0276l9h_I_DG-46_DT-45B12BB04560.29 BB04
0286l9h_I_DT-45_DT-44B12BB04550.28 BB04
0296l9h_I_DT-44_DA-43BBBBB00610.19 BB00
0306l9h_I_DA-43_DG-42BBBBB00410.41 BB00
0316l9h_I_DG-42_DG-41NANNANT00.65 BA05
0326l9h_I_DG-41_DG-40A-BAB05400.27 AB05
0336l9h_I_DG-40_DT-39B12BB04260.29 BB04
0346l9h_I_DT-39_DT-38BBBBB00370.24 BB00
0356l9h_I_DT-38_DA-37B12BB04370.18 BB04
0366l9h_I_DA-37_DG-36B12BB04580.29 BB04
0376l9h_I_DG-36_DG-35BB2BB07820.28 BB07
0386l9h_I_DG-35_DG-34BBBBB00620.32 BB00
0396l9h_I_DG-34_DT-33B12BB04450.32 BB04
0406l9h_I_DT-33_DT-32NANNANT00.41 BA05
0416l9h_I_DT-32_DA-31A-BAB05280.19 AB05
0426l9h_I_DA-31_DG-30NANNANT00.50 BA01
0436l9h_I_DG-30_DG-29NANNANT00.71 AA08
0446l9h_I_DG-29_DG-28A-BAB01260.43 AB01
0456l9h_I_DG-28_DT-27BBBBB00390.50 BB00
0466l9h_I_DT-27_DT-26BB2BB07100.39 BB07
0476l9h_I_DT-26_DA-25miBBB10240.44 BB10
0486l9h_I_DA-25_DG-24BB2BB07430.18 BB07
0496l9h_I_DG-24_DG-23B12BB04120.21 BB04
0506l9h_I_DG-23_DG-22BBBBB00270.24 BB00
0516l9h_I_DG-22_DT-21B-ABA08750.27 BA08
0526l9h_I_DT-21_DT-20AAAAA00120.41 AA00
0536l9h_I_DT-20_DA-19AAAAA00610.35 AA00
0546l9h_I_DA-19_DG-18AAAAA08390.38 AA08
0556l9h_I_DG-18_DG-17A-BAB05350.25 AB05
0566l9h_I_DG-17_DG-16miBBB10420.39 BB10
0576l9h_I_DG-16_DT-15B12BB04290.46 BB04
0586l9h_I_DT-15_DT-14BBBBB00730.30 BB00
0596l9h_I_DT-14_DA-13B12BB04670.14 BB04
0606l9h_I_DA-13_DG-12NANNANT00.38 BB04
0616l9h_I_DG-12_DG-11BBBBB00520.31 BB00
0626l9h_I_DG-11_DG-10B12BB04590.21 BB04
0636l9h_I_DG-10_DT-9B-ABA01150.19 BA01
0646l9h_I_DT-9_DT-8NANNANT00.38 AB01
0656l9h_I_DT-8_DA-7A-BAB03380.35 AB03
0666l9h_I_DA-7_DG-6BB2BB07140.38 BB07
0676l9h_I_DG-6_DG-5BBBBB01130.44 BB01
0686l9h_I_DG-5_DG-4BB2BB07560.26 BB07
0696l9h_I_DG-4_DT-3BBBBB00650.27 BB00
0706l9h_I_DT-3_DT-2BBBBB00470.30 BB00
0716l9h_I_DT-2_DA-1B-ABA08590.25 BA08
0726l9h_I_DA-1_DG0AAAAA00340.33 AA00
0736l9h_I_DG0_DG1A-BAB05370.33 AB05
0746l9h_I_DG1_DG2B12BB04270.37 BB04
0756l9h_I_DG2_DT3B12BB04390.46 BB04
0766l9h_I_DT3_DT4B-ABA08240.54 BA08
0776l9h_I_DT4_DA5A-BAB03660.19 AB03
0786l9h_I_DA5_DG6BB2BB07360.35 BB07
0796l9h_I_DG6_DG7NANNANT00.52 BB05
0806l9h_I_DG7_DG8BBBBB00580.35 BB00
0816l9h_I_DG8_DT9BBBBB00260.21 BB00
0826l9h_I_DT9_DT10BBBBB00430.24 BB00
0836l9h_I_DT10_DA11BBBBB00710.19 BB00
0846l9h_I_DA11_DG12B12BB04330.45 BB04
0856l9h_I_DG12_DG13B12BB04370.29 BB04
0866l9h_I_DG13_DG14BBBBB00540.32 BB00
0876l9h_I_DG14_DT15BB2BB07380.51 BB07
0886l9h_I_DT15_DT16B12BB04230.61 BB04
0896l9h_I_DT16_DA17B12BB04320.36 BB04
0906l9h_I_DA17_DG18BBBBB00170.25 BB00
0916l9h_I_DG18_DG19miBBB12170.59 BB12
0926l9h_I_DG19_DG20BBBBB00180.62 BB00
0936l9h_I_DG20_DT21BBBBB01760.21 BB01
0946l9h_I_DT21_DT22NANNANT00.69 AA04
0956l9h_I_DT22_DA23A-BAB05140.41 AB05
0966l9h_I_DA23_DG24BBBBB00570.23 BB00
0976l9h_I_DG24_DG25BBBBB00300.32 BB00
0986l9h_I_DG25_DG26BB2BB07650.53 BB07
0996l9h_I_DG26_DT27BBBBB00870.15 BB00
1006l9h_I_DT27_DT28BBBBB00620.24 BB00
1016l9h_I_DT28_DA29BBBBB00480.32 BB00
1026l9h_I_DA29_DG30NANNANT00.77 BB10
1036l9h_I_DG30_DG31BBBBB00210.41 BB00
1046l9h_I_DG31_DG32B12BB04260.27 BB04
1056l9h_I_DG32_DT33BBBBB00130.38 BB00
1066l9h_I_DT33_DT34BBBBB00670.21 BB00
1076l9h_I_DT34_DA35B-ABA08390.52 BA08
1086l9h_I_DA35_DG36A-BAB03510.22 AB03
1096l9h_I_DG36_DG37BB2BB07270.27 BB07
1106l9h_I_DG37_DG38BBBBB00330.34 BB00
1116l9h_I_DG38_DT39BBBBB00640.36 BB00
1126l9h_I_DT39_DT40B-ABA01100.27 BA01
1136l9h_I_DT40_DA41AAAAA00820.24 AA00
1146l9h_I_DA41_DG42NANNANT00.40 AB05
1156l9h_I_DG42_DG43B12BB04580.26 BB04
1166l9h_I_DG43_DG44BBBBB00420.25 BB00
1176l9h_I_DG44_DT45BBBBB00590.32 BB00
1186l9h_I_DT45_DT46B12BB04460.32 BB04
1196l9h_I_DT46_DA47B12BB04700.33 BB04
1206l9h_I_DA47_DG48BBBBB00530.27 BB00
1216l9h_I_DG48_DG49B12BB04670.25 BB04
1226l9h_I_DG49_DG50BBBBB01510.23 BB01
1236l9h_I_DG50_DT51B-ABA01160.25 BA01
1246l9h_I_DT51_DT52A-BAB01330.39 AB01
1256l9h_I_DT52_DA53BBBBB00640.27 BB00
1266l9h_I_DA53_DG54NANNANT00.50 BB04
1276l9h_I_DG54_DG55BBwBB17280.45 BB17
1286l9h_I_DG55_DG56NANNANT00.43 BA17
1296l9h_I_DG56_DT57B12BB04410.23 BB04
1306l9h_I_DT57_DT58BBBBB01490.36 BB01
1316l9h_I_DT58_DA59BBBBB00540.29 BB00
1326l9h_I_DA59_DG60BBBBB00400.35 BB00
1336l9h_I_DG60_DG61BBBBB00360.51 BB00
1346l9h_I_DG61_DG62B-ABA01140.35 BA01
1356l9h_I_DG62_DT63NANNANT00.44 AB05
1366l9h_I_DT63_DT64NANNANT00.62 BA08
1376l9h_I_DT64_DA65NANNANT00.41 AB05
1386l9h_I_DA65_DG66BBBBB00610.20 BB00
1396l9h_I_DG66_DG67B-ABA01390.32 BA01
1406l9h_I_DG67_DG68A-BAB01660.22 AB01
1416l9h_I_DG68_DT69B12BB04800.19 BB04
1426l9h_I_DT69_DG70BBBBB00700.37 BB00
1436l9h_I_DG70_DA71NANNANT00.51 BB04
1446l9h_I_DA71_DT72NANNANT00.33 BB03
1456l9h_J_DA-72_DT-71NANNANT00.59 BB11
1466l9h_J_DT-71_DC-70NANNANT00.45 BB03
1476l9h_J_DC-70_DA-69BBBBB00110.36 BB00
1486l9h_J_DA-69_DC-68BBBBB00590.33 BB00
1496l9h_J_DC-68_DC-67NANNANT00.37 BB07
1506l9h_J_DC-67_DC-66NANNANT00.40 BA08
1516l9h_J_DC-66_DT-65A-BAB01140.28 AB01
1526l9h_J_DT-65_DA-64BBBBB00290.26 BB00
1536l9h_J_DA-64_DA-63miBBB15230.30 BB15
1546l9h_J_DA-63_DC-62B-ABA08640.25 BA08
1556l9h_J_DC-62_DC-61AAAAA00810.23 AA00
1566l9h_J_DC-61_DC-60A-BAB05350.30 AB05
1576l9h_J_DC-60_DT-59B12BB04360.43 BB04
1586l9h_J_DT-59_DA-58NANNANT00.39 BA08
1596l9h_J_DA-58_DA-57A-BAB01120.51 AB01
1606l9h_J_DA-57_DC-56B12BB04320.43 BB04
1616l9h_J_DC-56_DC-55B12BB04680.18 BB04
1626l9h_J_DC-55_DC-54B12BB04510.28 BB04
1636l9h_J_DC-54_DT-53NANNANT00.58 BB16
1646l9h_J_DT-53_DA-52miBBB10450.35 BB10
1656l9h_J_DA-52_DA-51NANNANT00.50 BA09
1666l9h_J_DA-51_DC-50AAAAA08760.24 AA08
1676l9h_J_DC-50_DC-49A-BAB05240.19 AB05
1686l9h_J_DC-49_DC-48B12BB04250.32 BB04
1696l9h_J_DC-48_DT-47B12BB04240.26 BB04
1706l9h_J_DT-47_DA-46NANNANT00.64 BA05
1716l9h_J_DA-46_DA-45B12BB04480.41 BB04
1726l9h_J_DA-45_DC-44B12BB04780.17 BB04
1736l9h_J_DC-44_DC-43BBBBB00360.24 BB00
1746l9h_J_DC-43_DC-42BBBBB00650.20 BB00
1756l9h_J_DC-42_DT-41BBBBB01170.31 BB01
1766l9h_J_DT-41_DA-40A-BAB03710.35 AB03
1776l9h_J_DA-40_DA-39miBBB13480.32 BB13
1786l9h_J_DA-39_DC-38B-ABA05230.34 BA05
1796l9h_J_DC-38_DC-37NANNANT00.38 AB01
1806l9h_J_DC-37_DC-36NANNANT00.52 BB04
1816l9h_J_DC-36_DT-35BB2BB07170.26 BB07
1826l9h_J_DT-35_DA-34BBBBB00670.30 BB00
1836l9h_J_DA-34_DA-33B-ABA08420.34 BA08
1846l9h_J_DA-33_DC-32NANNANT00.50 AA10
1856l9h_J_DC-32_DC-31AAAAA00640.37 AA00
1866l9h_J_DC-31_DC-30A-BAB05670.23 AB05
1876l9h_J_DC-30_DT-29BBBBB00480.34 BB00
1886l9h_J_DT-29_DA-28B12BB04460.40 BB04
1896l9h_J_DA-28_DA-27BBBBB00160.34 BB00
1906l9h_J_DA-27_DC-26B-ABA08630.42 BA08
1916l9h_J_DC-26_DC-25A-BAB05670.26 AB05
1926l9h_J_DC-25_DC-24B-ABA08690.37 BA08
1936l9h_J_DC-24_DT-23A-BAB03540.18 AB03
1946l9h_J_DT-23_DA-22BBBBB00140.26 BB00
1956l9h_J_DA-22_DA-21BBBBB00190.30 BB00
1966l9h_J_DA-21_DC-20NANNANT00.78 BB12
1976l9h_J_DC-20_DC-19A-BAB04630.19 AB04
1986l9h_J_DC-19_DC-18NANNANT00.70 BB02
1996l9h_J_DC-18_DT-17NANNANT00.41 BB12
2006l9h_J_DT-17_DA-16NANNANT00.81 AB02
2016l9h_J_DA-16_DA-15BB2BB07130.45 BB07
2026l9h_J_DA-15_DC-14BBBBB01690.26 BB01
2036l9h_J_DC-14_DC-13BBBBB00580.35 BB00
2046l9h_J_DC-13_DC-12BBBBB00830.19 BB00
2056l9h_J_DC-12_DT-11B12BB04650.23 BB04
2066l9h_J_DT-11_DA-10BBBBB00730.27 BB00
2076l9h_J_DA-10_DA-9B-ABA08500.34 BA08
2086l9h_J_DA-9_DC-8AAAAA04580.40 AA04
2096l9h_J_DC-8_DC-7NANNANT00.30 AB05
2106l9h_J_DC-7_DC-6B12BB04280.24 BB04
2116l9h_J_DC-6_DT-5BBBBB00470.35 BB00
2126l9h_J_DT-5_DA-4B12BB04290.39 BB04
2136l9h_J_DA-4_DA-3BBBBB01190.32 BB01
2146l9h_J_DA-3_DC-2BBBBB01460.23 BB01
2156l9h_J_DC-2_DC-1BBBBB01480.22 BB01
2166l9h_J_DC-1_DC0BBBBB01500.29 BB01
2176l9h_J_DC0_DT1BBBBB01710.22 BB01
2186l9h_J_DT1_DA2BBBBB00570.20 BB00
2196l9h_J_DA2_DA3B-ABA08860.36 BA08
2206l9h_J_DA3_DC4NANNANT00.55 AB05
2216l9h_J_DC4_DC5NANNANT00.61 BB10
2226l9h_J_DC5_DC6BB2BB07340.32 BB07
2236l9h_J_DC6_DT7B12BB04430.32 BB04
2246l9h_J_DT7_DA8B12BB04700.26 BB04
2256l9h_J_DA8_DA9BBBBB00680.30 BB00
2266l9h_J_DA9_DC10B-ABA05110.34 BA05
2276l9h_J_DC10_DC11BBBBB00110.30 BB00
2286l9h_J_DC11_DC12BBBBB00500.36 BB00
2296l9h_J_DC12_DT13miBBB10750.30 BB10
2306l9h_J_DT13_DA14B12BB04310.36 BB04
2316l9h_J_DA14_DA15B12BB04540.41 BB04
2326l9h_J_DA15_DC16NANNANT00.62 BB15
2336l9h_J_DC16_DC17BB2BB07370.28 BB07
2346l9h_J_DC17_DC18BBBBB00700.21 BB00
2356l9h_J_DC18_DT19B-ABA08500.37 BA08
2366l9h_J_DT19_DA20A-BAB01110.36 AB01
2376l9h_J_DA20_DA21B-ABA10650.26 BA10
2386l9h_J_DA21_DC22AAAAA08770.21 AA08
2396l9h_J_DC22_DC23AAAAA08260.47 AA08
2406l9h_J_DC23_DC24A-BAB05210.30 AB05
2416l9h_J_DC24_DT25miBBB10520.41 BB10
2426l9h_J_DT25_DA26BB2BB07670.27 BB07
2436l9h_J_DA26_DA27miBBB10390.21 BB10
2446l9h_J_DA27_DC28B-ABA08630.36 BA08
2456l9h_J_DC28_DC29A-BAB03700.31 AB03
2466l9h_J_DC29_DC30B12BB04510.33 BB04
2476l9h_J_DC30_DT31BBwBB16260.45 BB16
2486l9h_J_DT31_DA32B12BB0480.49 BB04
2496l9h_J_DA32_DA33B12BB04320.32 BB04
2506l9h_J_DA33_DC34BBBBB00510.26 BB00
2516l9h_J_DC34_DC35B12BB04410.18 BB04
2526l9h_J_DC35_DC36B12BB04370.42 BB04
2536l9h_J_DC36_DT37BB2BB07710.16 BB07
2546l9h_J_DT37_DA38NANNANT00.47 BA08
2556l9h_J_DA38_DA39A-BAB01460.28 AB01
2566l9h_J_DA39_DC40B-ABA01140.25 BA01
2576l9h_J_DC40_DC41AAAAA04890.20 AA04
2586l9h_J_DC41_DC42A-BAB01270.38 AB01
2596l9h_J_DC42_DT43B12BB04270.39 BB04
2606l9h_J_DT43_DA44B-ABA08870.15 BA08
2616l9h_J_DA44_DA45NANNANT00.56 AB05
2626l9h_J_DA45_DC46BBBBB00880.21 BB00
2636l9h_J_DC46_DC47B12BB04810.20 BB04
2646l9h_J_DC47_DC48BBBBB00690.26 BB00
2656l9h_J_DC48_DT49B12BB04620.26 BB04
2666l9h_J_DT49_DA50BBBBB00780.33 BB00
2676l9h_J_DA50_DA51B-ABA0580.46 BA05
2686l9h_J_DA51_DC52A-BAB03150.36 AB03
2696l9h_J_DC52_DC53BBBBB00380.25 BB00
2706l9h_J_DC53_DC54B12BB04280.35 BB04
2716l9h_J_DC54_DT55NANNANT00.32 BB10
2726l9h_J_DT55_DA56BB2BB07340.38 BB07
2736l9h_J_DA56_DA57B12BB04690.26 BB04
2746l9h_J_DA57_DC58BBBBB00240.35 BB00
2756l9h_J_DC58_DC59BBBBB00490.30 BB00
2766l9h_J_DC59_DC60BBBBB00590.34 BB00
2776l9h_J_DC60_DT61NANNANT00.37 BA08
2786l9h_J_DT61_DA62NANNANT00.39 AA02
2796l9h_J_DA62_DA63A-BAB03710.25 AB03
2806l9h_J_DA63_DC64NANNANT00.47 BA08
2816l9h_J_DC64_DC65A-BAB05520.32 AB05
2826l9h_J_DC65_DC66BBBBB00770.18 BB00
2836l9h_J_DC66_DT67A-BAB03310.34 AB03
2846l9h_J_DT67_DA68NANNANT00.45 BB05
2856l9h_J_DA68_DA69BBBBB00120.59 BB00
2866l9h_J_DA69_DG70BBBBB00840.17 BB00
2876l9h_J_DG70_DA71NANNANT00.81 BA05
2886l9h_J_DA71_DT72NANNANT00.74 BB03

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

Browse conformers

Return up to random steps in PDB structures ( include large structures )

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