DNATCO v4.1: results

Holliday Junctions formed from Telomeric DNA

Results of the assignment of 82 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	6gdn_A_DG1_DG2	A-B	AB01	69	0.22	AB01
02	6gdn_A_DG2_DT3	BBB	BB00	82	0.23	BB00
03	6gdn_A_DT3_DT4	BBB	BB00	58	0.17	BB00
04	6gdn_A_DT4_DA5	NAN	NANT	0	0.52	BB07
05	6gdn_A_DA5_DG6	B-A	BA17	57	0.36	BA17
06	6gdn_A_DG6_DG7	miB	BB14	8	0.40	BB14
07	6gdn_A_DG7_DG8	BBB	BB00	19	0.23	BB00
08	6gdn_A_DG8_DT9	BBB	BB01	40	0.22	BB01
09	6gdn_A_DT9_DT10	BBB	BB00	24	0.19	BB00
10	6gdn_A_DT10_DC11	BBB	BB00	51	0.39	BB00
11	6gdn_A_DC11_DT12	NAN	NANT	0	0.94	IC05
12	6gdn_A_DT12_DT13	NAN	NANT	0	1.19	OP13
13	6gdn_A_DT13_DG14	NAN	NANT	0	0.76	OP27
14	6gdn_A_DG14_DA15	BBB	BB00	70	0.25	BB00
15	6gdn_A_DA15_DA16	BBB	BB00	91	0.15	BB00
16	6gdn_A_DA16_DC17	OPN	OP11	27	0.58	OP11
17	6gdn_A_DC17_DC18	AAA	AA00	35	0.26	AA00
18	6gdn_A_DC18_DC19	A-B	AB01	21	0.31	AB01
19	6gdn_A_DC19_DT20	NAN	NANT	0	0.80	OP04
20	6gdn_A_DT20_DT21	NAN	NANT	0	0.99	OP11
21	6gdn_A_DT21_DG22	NAN	NANT	0	1.85	BB10
22	6gdn_A_DG22_DG23	NAN	NANT	0	2.05	OP15
23	6gdn_A_DG23_DG24	AAw	AA10	73	0.37	AA10
24	6gdn_A_DG24_DT25	NAN	NANT	0	0.53	AA10
25	6gdn_A_DT25_DT26	NAN	NANT	0	0.54	IC06
26	6gdn_A_DT26_DA27	miB	BB10	74	0.20	BB10
27	6gdn_A_DA27_DC28	BBw	BB11	55	0.45	BB11
28	6gdn_A_DC28_DT29	NAN	NANT	0	1.31	BB03
29	6gdn_A_DT29_DT30	NAN	NANT	0	2.07	ZZ02
30	6gdn_A_DT30_DG31	NAN	NANT	0	1.68	BB11
31	6gdn_A_DG31_DT32	NAN	NANT	0	0.42	BA08
32	6gdn_A_DT32_DA33	NAN	NANT	0	0.45	AB03
33	6gdn_A_DA33_DA34	NAN	NANT	0	0.48	BB17
34	6gdn_A_DA34_DC35	NAN	NANT	0	0.53	OP11
35	6gdn_A_DC35_DC36	A-B	AB04	42	0.34	AB04
36	6gdn_A_DC36_DC37	BBB	BB01	51	0.21	BB01
37	6gdn_A_DC37_DT38	A-B	AB03	43	0.46	AB03
38	6gdn_A_DT38_DA39	NAN	NANT	0	0.83	OP24
39	6gdn_A_DA39_DA40	BBw	BB02	66	0.30	BB02
40	6gdn_A_DA40_DC41	NAN	NANT	0	0.41	BA10
41	6gdn_A_DC41_DC42	NAN	NANT	0	0.64	AA10
42	6gdn_B_DG1_DG2	NAN	NANT	0	0.45	BA08
43	6gdn_B_DG2_DT3	NAN	NANT	0	0.46	AA01
44	6gdn_B_DT3_DT4	NAN	NANT	0	0.46	BB10
45	6gdn_B_DT4_DA5	B12	BB04	46	0.25	BB04
46	6gdn_B_DA5_DG6	B-A	BA10	44	0.46	BA10
47	6gdn_B_DG6_DG7	AAw	AA11	44	0.43	AA11
48	6gdn_B_DG7_DG8	A-B	AB04	28	0.44	AB04
49	6gdn_B_DG8_DT9	NAN	NANT	0	0.45	BB17
50	6gdn_B_DT9_DT10	NAN	NANT	0	0.40	AB02
51	6gdn_B_DT10_DC11	AAA	AA02	19	0.58	AA02
52	6gdn_B_DC11_DT12	NAN	NANT	0	0.80	ZZ01
53	6gdn_B_DT12_DT13	NAN	NANT	0	0.46	OP21
54	6gdn_B_DT13_DG14	NAN	NANT	0	0.49	OP20
55	6gdn_B_DG14_DA15	BBB	BB00	82	0.28	BB00
56	6gdn_B_DA15_DA16	BBB	BB00	83	0.20	BB00
57	6gdn_B_DA16_DC17	OPN	OP11	35	0.69	OP11
58	6gdn_B_DC17_DC18	A-B	AB04	52	0.28	AB04
59	6gdn_B_DC18_DC19	NAN	NANT	0	0.43	AB03
60	6gdn_B_DC19_DT20	NAN	NANT	0	0.76	OP04
61	6gdn_B_DT20_DT21	NAN	NANT	0	1.47	AB02
62	6gdn_B_DT21_DG22	NAN	NANT	0	1.41	BB13
63	6gdn_B_DG22_DG23	NAN	NANT	0	2.16	BA16
64	6gdn_B_DG23_DG24	NAN	NANT	0	0.65	AA01
65	6gdn_B_DG24_DT25	NAN	NANT	0	0.49	AB02
66	6gdn_B_DT25_DT26	miB	BB15	61	0.33	BB15
67	6gdn_B_DT26_DA27	B-A	BA05	54	0.32	BA05
68	6gdn_B_DA27_DC28	A-B	AB01	12	0.44	AB01
69	6gdn_B_DC28_DT29	NAN	NANT	0	0.69	OP25
70	6gdn_B_DT29_DT30	NAN	NANT	0	1.82	OP31
71	6gdn_B_DT30_DG31	NAN	NANT	0	1.03	BB10
72	6gdn_B_DG31_DT32	NAN	NANT	0	0.75	BB08
73	6gdn_B_DT32_DA33	BB2	BB07	65	0.27	BB07
74	6gdn_B_DA33_DA34	BBB	BB00	62	0.27	BB00
75	6gdn_B_DA34_DC35	OPN	OP11	41	0.60	OP11
76	6gdn_B_DC35_DC36	AAA	AA00	73	0.29	AA00
77	6gdn_B_DC36_DC37	AAA	AA00	21	0.41	AA00
78	6gdn_B_DC37_DT38	A-B	AB01	35	0.38	AB01
79	6gdn_B_DT38_DA39	NAN	NANT	0	0.94	OP24
80	6gdn_B_DA39_DA40	NAN	NANT	0	0.63	BB00
81	6gdn_B_DA40_DC41	B-A	BA01	26	0.40	BA01
82	6gdn_B_DC41_DC42	AAA	AA04	63	0.43	AA04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 82 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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