DNATCO v4.1: results

Structure of the human mitochondrial transcription initiation complex at the HSP promoter

Results of the assignment of 174 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	6erq_D_DC1_DA2	BBB	BB01	60	0.30	BB01
002	6erq_D_DA2_DC3	BBB	BB00	79	0.14	BB00
003	6erq_D_DC3_DC4	NAN	NANT	0	0.36	BA01
004	6erq_D_DC4_DG5	A-B	AB02	61	0.51	AB02
005	6erq_D_DG5_DC6	BB2	BB07	77	0.21	BB07
006	6erq_D_DC6_DT7	B-A	BA13	46	0.36	BA13
007	6erq_D_DT7_DG8	AAA	AA00	73	0.32	AA00
008	6erq_D_DG8_DC9	NAN	NANT	0	0.49	AB04
009	6erq_D_DC9_DT10	NAN	NANT	0	0.33	AB03
010	6erq_D_DT10_DA11	B-A	BA08	28	0.44	BA08
011	6erq_D_DA11_DA12	NAN	NANT	0	0.65	BA08
012	6erq_D_DA12_DC13	BBB	BB00	19	0.23	BB00
013	6erq_D_DC13_DC14	BBB	BB00	49	0.32	BB00
014	6erq_D_DC14_DC15	BBB	BB00	58	0.38	BB00
015	6erq_D_DC15_DC16	B12	BB04	81	0.31	BB04
016	6erq_D_DC16_DA17	BBB	BB00	43	0.35	BB00
017	6erq_D_DA17_DT18	NAN	NANT	0	0.79	IC05
018	6erq_D_DT18_DA19	NAN	NANT	0	0.60	BA16
019	6erq_D_DA19_DC20	NAN	NANT	0	0.67	AA06
020	6erq_D_DC20_DC21	A-B	AB05	78	0.26	AB05
021	6erq_D_DC21_DC22	BBB	BB00	77	0.26	BB00
022	6erq_D_DC22_DC23	BBB	BB00	66	0.29	BB00
023	6erq_D_DC23_DG24	BB2	BB07	70	0.17	BB07
024	6erq_D_DG24_DA25	BBw	BB02	75	0.24	BB02
025	6erq_D_DA25_DA26	BBB	BB00	14	0.39	BB00
026	6erq_D_DA26_DC27	B12	BB04	31	0.23	BB04
027	6erq_D_DC27_DC28	BBw	BB03	41	0.46	BB03
028	6erq_D_DC28_DA29	BBB	BB00	40	0.43	BB00
029	6erq_D_DA29_DA30	BBB	BB00	88	0.22	BB00
030	6erq_D_DA30_DC31	B-A	BA08	64	0.31	BA08
031	6erq_D_DC31_DC32	BBB	BB01	13	0.21	BB01
032	6erq_D_DC32_DA33	B12	BB04	66	0.24	BB04
033	6erq_D_DA33_DA34	B12	BB04	34	0.23	BB04
034	6erq_D_DA34_DA35	miB	BB10	39	0.23	BB10
035	6erq_D_DA35_DT36	NAN	NANT	0	0.85	BB15
036	6erq_D_DT36_DT37	NAN	NANT	0	0.81	BB02
037	6erq_D_DT37_DA38	BB2	BB07	66	0.25	BB07
038	6erq_D_DG43_DA44	NAN	NANT	0	0.37	BB08
039	6erq_D_DA44_DC45	B12	BB04	38	0.33	BB04
040	6erq_D_DC45_DA46	B12	BB04	84	0.24	BB04
041	6erq_D_DA46_DG47	B12	BB04	84	0.16	BB04
042	6erq_D_DG47_DG48	B12	BB04	79	0.23	BB04
043	6erq_D_DG48_DC49	B12	BB04	87	0.21	BB04
044	6erq_D_DC49_DC50	B12	BB04	84	0.20	BB04
045	6erq_E_DG1_DG2	B12	BB04	71	0.24	BB04
046	6erq_E_DG2_DC3	B12	BB04	76	0.21	BB04
047	6erq_E_DC3_DC4	B12	BB04	82	0.19	BB04
048	6erq_E_DC4_DT5	B12	BB04	76	0.23	BB04
049	6erq_E_DT5_DG6	B12	BB04	81	0.23	BB04
050	6erq_E_DG6_DT7	B12	BB04	79	0.27	BB04
051	6erq_E_DT7_DC8	B12	BB04	76	0.31	BB04
052	6erq_E_DG14_DG15	NAN	NANT	0	2.54	OPS1
053	6erq_E_DG15_DT16	NAN	NANT	0	1.29	AA13
054	6erq_E_DT16_DT17	B12	BB04	34	0.31	BB04
055	6erq_E_DT17_DT18	B12	BB04	31	0.29	BB04
056	6erq_E_DT18_DG19	B12	BB04	22	0.42	BB04
057	6erq_E_DG19_DG20	NAN	NANT	0	1.14	OP26
058	6erq_E_DG20_DT21	BBB	BB00	48	0.33	BB00
059	6erq_E_DT21_DT22	BBB	BB00	60	0.30	BB00
060	6erq_E_DT22_DG23	BBB	BB00	73	0.26	BB00
061	6erq_E_DG23_DG24	BBw	BB02	53	0.17	BB02
062	6erq_E_DG24_DT25	BBB	BB00	66	0.24	BB00
063	6erq_E_DT25_DT26	B12	BB04	55	0.21	BB04
064	6erq_E_DT26_DC27	miB	BB15	45	0.26	BB15
065	6erq_E_DC27_DG28	BBB	BB00	64	0.23	BB00
066	6erq_E_DG28_DG29	BB2	BB07	46	0.36	BB07
067	6erq_E_DG29_DG30	B-A	BA01	47	0.23	BA01
068	6erq_E_DG30_DG31	AAA	AA00	42	0.40	AA00
069	6erq_E_DG31_DT32	A-B	AB05	50	0.41	AB05
070	6erq_E_DT32_DA33	NAN	NANT	0	0.51	BB07
071	6erq_E_DA33_DT34	B12	BB04	15	0.64	BB04
072	6erq_E_DT34_DG35	B12	BB04	61	0.23	BB04
073	6erq_E_DG35_DG36	NAN	NANT	0	0.59	BA13
074	6erq_E_DG36_DG37	NAN	NANT	0	0.49	AA11
075	6erq_E_DG37_DG38	BBw	BB16	53	0.43	BB16
076	6erq_E_DG38_DT39	BBB	BB00	73	0.27	BB00
077	6erq_E_DT39_DT40	NAN	NANT	0	0.82	BB03
078	6erq_E_DT40_DA41	NAN	NANT	0	0.59	BB15
079	6erq_E_DA41_DG42	NAN	NANT	0	0.54	AB02
080	6erq_E_DG42_DC43	NAN	NANT	0	0.63	AB02
081	6erq_E_DC43_DA44	BBB	BB00	49	0.28	BB00
082	6erq_E_DA44_DG45	BBB	BB00	89	0.12	BB00
083	6erq_E_DG45_DC46	BBB	BB00	93	0.16	BB00
084	6erq_E_DC46_DG47	BB2	BB07	77	0.29	BB07
085	6erq_E_DG47_DG48	BBB	BB00	76	0.15	BB00
086	6erq_E_DG48_DT49	BBB	BB00	75	0.22	BB00
087	6erq_E_DT49_DG50	BBB	BB00	78	0.23	BB00
088	6erq_H_DC1_DA2	BBB	BB01	65	0.29	BB01
089	6erq_H_DA2_DC3	BBB	BB00	79	0.16	BB00
090	6erq_H_DC3_DC4	B-A	BA01	12	0.35	BA01
091	6erq_H_DC4_DG5	A-B	AB02	59	0.50	AB02
092	6erq_H_DG5_DC6	BB2	BB07	77	0.20	BB07
093	6erq_H_DC6_DT7	B-A	BA13	48	0.37	BA13
094	6erq_H_DT7_DG8	AAA	AA00	72	0.32	AA00
095	6erq_H_DG8_DC9	A-B	AB04	16	0.49	AB04
096	6erq_H_DC9_DT10	A-B	AB03	23	0.22	AB03
097	6erq_H_DT10_DA11	B-A	BA08	27	0.51	BA08
098	6erq_H_DA11_DA12	NAN	NANT	0	0.35	AB03
099	6erq_H_DA12_DC13	BBB	BB00	10	0.25	BB00
100	6erq_H_DC13_DC14	BBB	BB00	55	0.31	BB00
101	6erq_H_DC14_DC15	BBB	BB00	56	0.36	BB00
102	6erq_H_DC15_DC16	B12	BB04	80	0.28	BB04
103	6erq_H_DC16_DA17	BBB	BB00	35	0.21	BB00
104	6erq_H_DA17_DT18	NAN	NANT	0	0.40	BB15
105	6erq_H_DT18_DA19	B-A	BA16	22	0.52	BA16
106	6erq_H_DA19_DC20	NAN	NANT	0	0.69	AA06
107	6erq_H_DC20_DC21	A-B	AB05	77	0.30	AB05
108	6erq_H_DC21_DC22	BBB	BB00	79	0.25	BB00
109	6erq_H_DC22_DC23	BBB	BB00	66	0.28	BB00
110	6erq_H_DC23_DG24	BB2	BB07	70	0.21	BB07
111	6erq_H_DG24_DA25	BBw	BB02	61	0.28	BB02
112	6erq_H_DA25_DA26	NAN	NANT	0	0.39	BB03
113	6erq_H_DA26_DC27	B12	BB04	17	0.49	BB04
114	6erq_H_DC27_DC28	BBw	BB03	23	0.52	BB03
115	6erq_H_DC28_DA29	BBB	BB00	43	0.39	BB00
116	6erq_H_DA29_DA30	BBB	BB00	88	0.22	BB00
117	6erq_H_DA30_DC31	B-A	BA08	65	0.31	BA08
118	6erq_H_DC31_DC32	BBB	BB00	24	0.20	BB00
119	6erq_H_DC32_DA33	B12	BB04	65	0.25	BB04
120	6erq_H_DA33_DA34	B12	BB04	32	0.26	BB04
121	6erq_H_DA34_DA35	miB	BB10	39	0.17	BB10
122	6erq_H_DA35_DT36	NAN	NANT	0	0.69	BB10
123	6erq_H_DT36_DT37	NAN	NANT	0	0.40	BB10
124	6erq_H_DT37_DA38	NAN	NANT	0	0.69	BB04
125	6erq_H_DG43_DA44	BBB	BB00	37	0.44	BB00
126	6erq_H_DA44_DC45	B12	BB04	43	0.29	BB04
127	6erq_H_DC45_DA46	B12	BB04	86	0.21	BB04
128	6erq_H_DA46_DG47	B12	BB04	87	0.17	BB04
129	6erq_H_DG47_DG48	B12	BB04	82	0.21	BB04
130	6erq_H_DG48_DC49	B12	BB04	87	0.21	BB04
131	6erq_H_DC49_DC50	B12	BB04	84	0.21	BB04
132	6erq_I_DG1_DG2	B12	BB04	73	0.25	BB04
133	6erq_I_DG2_DC3	B12	BB04	79	0.22	BB04
134	6erq_I_DC3_DC4	B12	BB04	84	0.19	BB04
135	6erq_I_DC4_DT5	B12	BB04	79	0.24	BB04
136	6erq_I_DT5_DG6	B12	BB04	80	0.23	BB04
137	6erq_I_DG6_DT7	B12	BB04	78	0.29	BB04
138	6erq_I_DT7_DC8	B12	BB04	82	0.25	BB04
139	6erq_I_DG14_DG15	NAN	NANT	0	1.92	BB2S
140	6erq_I_DG15_DT16	NAN	NANT	0	1.63	ZZS2
141	6erq_I_DT16_DT17	B12	BB04	49	0.28	BB04
142	6erq_I_DT17_DT18	B12	BB04	30	0.29	BB04
143	6erq_I_DT18_DG19	B12	BB04	23	0.42	BB04
144	6erq_I_DG19_DG20	NAN	NANT	0	1.14	OP26
145	6erq_I_DG20_DT21	BBB	BB00	48	0.34	BB00
146	6erq_I_DT21_DT22	BBB	BB00	59	0.32	BB00
147	6erq_I_DT22_DG23	B12	BB04	75	0.26	BB04
148	6erq_I_DG23_DG24	BBw	BB02	42	0.28	BB02
149	6erq_I_DG24_DT25	BBB	BB00	42	0.33	BB00
150	6erq_I_DT25_DT26	B12	BB04	42	0.33	BB04
151	6erq_I_DT26_DC27	miB	BB15	39	0.30	BB15
152	6erq_I_DC27_DG28	BBB	BB00	57	0.26	BB00
153	6erq_I_DG28_DG29	BB2	BB07	43	0.44	BB07
154	6erq_I_DG29_DG30	B-A	BA01	63	0.22	BA01
155	6erq_I_DG30_DG31	AAA	AA00	35	0.44	AA00
156	6erq_I_DG31_DT32	A-B	AB05	60	0.38	AB05
157	6erq_I_DT32_DA33	NAN	NANT	0	0.47	BA17
158	6erq_I_DA33_DT34	B12	BB04	34	0.36	BB04
159	6erq_I_DT34_DG35	B12	BB04	59	0.23	BB04
160	6erq_I_DG35_DG36	NAN	NANT	0	0.53	BA13
161	6erq_I_DG36_DG37	NAN	NANT	0	0.51	AA11
162	6erq_I_DG37_DG38	BBw	BB16	46	0.37	BB16
163	6erq_I_DG38_DT39	BBB	BB00	59	0.33	BB00
164	6erq_I_DT39_DT40	BBw	BB02	80	0.25	BB02
165	6erq_I_DT40_DA41	NAN	NANT	0	0.64	BB15
166	6erq_I_DA41_DG42	NAN	NANT	0	0.56	AB02
167	6erq_I_DG42_DC43	NAN	NANT	0	0.71	AB02
168	6erq_I_DC43_DA44	BBB	BB00	60	0.25	BB00
169	6erq_I_DA44_DG45	BBB	BB00	89	0.12	BB00
170	6erq_I_DG45_DC46	BBB	BB00	89	0.20	BB00
171	6erq_I_DC46_DG47	BB2	BB07	76	0.29	BB07
172	6erq_I_DG47_DG48	BBB	BB00	74	0.17	BB00
173	6erq_I_DG48_DT49	BBB	BB00	75	0.22	BB00
174	6erq_I_DT49_DG50	BBB	BB00	83	0.18	BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Z

N

Results of the assignment of 174 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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