DNATCO v4.1: results

Pre-Reaction Complex, RAG1(E962Q)/2-intact/nicked 12/23RSS complex in Mn2+

Results of the assignment of 167 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	6cik_F_DT6_DT7	BBB	BB00	40	0.33	BB00
002	6cik_F_DT7_DT8	NAN	NANT	0	0.45	BB05
003	6cik_F_DT8_DT9	NAN	NANT	0	0.62	BA10
004	6cik_F_DT9_DG10	miB	BB15	82	0.20	BB15
005	6cik_F_DG10_DT11	NAN	NANT	0	0.59	BA08
006	6cik_F_DT11_DT12	AAA	AA02	15	0.38	AA02
007	6cik_F_DT12_DA13	NAN	NANT	0	0.50	BB10
008	6cik_F_DA13_DA14	B12	BB04	77	0.34	BB04
009	6cik_F_DA14_DG15	BBB	BB00	71	0.16	BB00
010	6cik_F_DG15_DG16	NAN	NANT	0	0.55	BB10
011	6cik_F_DG16_DG17	B12	BB05	63	0.40	BB05
012	6cik_F_DG17_DC18	BBw	BB03	19	0.60	BB03
013	6cik_F_DC18_DT19	BBB	BB00	18	0.27	BB00
014	6cik_F_DT19_DG20	BBB	BB00	86	0.21	BB00
015	6cik_F_DG20_DT21	BBB	BB00	35	0.20	BB00
016	6cik_F_DT21_DA22	NAN	NANT	0	0.45	BB07
017	6cik_F_DA22_DT23	B-A	BA09	37	0.30	BA09
018	6cik_F_DT23_DC24	NAN	NANT	0	0.50	AA01
019	6cik_F_DC24_DA25	NAN	NANT	0	0.50	AB03
020	6cik_F_DA25_DC26	BBB	BB00	28	0.26	BB00
021	6cik_F_DC26_DT27	B-A	BA08	74	0.35	BA08
022	6cik_F_DT27_DG28	A-B	AB03	70	0.40	AB03
023	6cik_F_DG28_DT29	BBB	BB00	53	0.27	BB00
024	6cik_F_DT29_DG30	B12	BB04	26	0.24	BB04
025	6cik_F_DG30_DT31	BBB	BB00	44	0.17	BB00
026	6cik_F_DT31_DA32	BBB	BB00	63	0.26	BB00
027	6cik_F_DA32_DA33	BB2	BB07	65	0.29	BB07
028	6cik_F_DA33_DG34	B-A	BA10	55	0.34	BA10
029	6cik_F_DG34_DA35	A-B	AB01	15	0.27	AB01
030	6cik_F_DA35_DC36	BBB	BB00	39	0.22	BB00
031	6cik_F_DC36_DA37	B12	BB04	25	0.29	BB04
032	6cik_F_DA37_DG38	B12	BB04	71	0.33	BB04
033	6cik_F_DG38_DG39	B-A	BA05	41	0.34	BA05
034	6cik_F_DG39_DC40	NAN	NANT	0	1.79	OP21
035	6cik_I_DG7_DC8	NAN	NANT	0	0.92	OP16
036	6cik_I_DC8_DC9	BBB	BB00	41	0.25	BB00
037	6cik_I_DC9_DT10	miB	BB10	66	0.37	BB10
038	6cik_I_DT10_DG11	NAN	NANT	0	0.88	BB12
039	6cik_I_DG11_DT12	BBB	BB00	24	0.41	BB00
040	6cik_I_DT12_DC13	BBB	BB00	26	0.25	BB00
041	6cik_I_DC13_DT14	BBB	BB00	43	0.26	BB00
042	6cik_I_DT14_DT15	NAN	NANT	0	0.63	BB08
043	6cik_I_DT15_DA16	B12	BB04	10	0.45	BB04
044	6cik_I_DA16_DC17	miB	BB15	40	0.32	BB15
045	6cik_I_DC17_DA18	miB	BB10	53	0.39	BB10
046	6cik_I_DA18_DC19	BBB	BB00	38	0.21	BB00
047	6cik_I_DC19_DA20	B-A	BA17	70	0.33	BA17
048	6cik_I_DA20_DG21	A-B	AB02	51	0.51	AB02
049	6cik_I_DG21_DT22	B-A	BA08	77	0.41	BA08
050	6cik_I_DT22_DG23	A-B	AB01	34	0.29	AB01
051	6cik_I_DG23_DA24	BBB	BB00	63	0.23	BB00
052	6cik_I_DA24_DT25	BBB	BB01	84	0.17	BB01
053	6cik_I_DT25_DA26	B12	BB04	31	0.20	BB04
054	6cik_I_DA26_DC27	B12	BB04	66	0.27	BB04
055	6cik_I_DC27_DA28	B12	BB04	75	0.21	BB04
056	6cik_I_DA28_DG29	B12	BB04	47	0.26	BB04
057	6cik_I_DG29_DC30	B-A	BA08	36	0.28	BA08
058	6cik_I_DC30_DC31	NAN	NANT	0	0.42	AB03
059	6cik_I_DC31_DC32	NAN	NANT	0	0.44	BB05
060	6cik_I_DC32_DT33	NAN	NANT	0	0.63	BB15
061	6cik_I_DT33_DT34	NAN	NANT	0	0.62	BB03
062	6cik_I_DT34_DA35	A-B	AB04	62	0.23	AB04
063	6cik_I_DA35_DA36	miB	BB10	29	0.35	BB10
064	6cik_I_DA36_DC37	BBB	BB00	52	0.36	BB00
065	6cik_I_DC37_DA38	miB	BB15	33	0.45	BB15
066	6cik_I_DA38_DA39	NAN	NANT	0	0.34	BB07
067	6cik_I_DA39_DA40	B12	BB04	67	0.18	BB04
068	6cik_I_DA40_DA41	BBB	BB00	46	0.17	BB00
069	6cik_G_DG3_DG4	BBw	BB03	29	0.38	BB03
070	6cik_G_DG4_DT5	BBB	BB00	49	0.25	BB00
071	6cik_G_DT5_DT6	B-A	BA10	51	0.23	BA10
072	6cik_G_DT6_DT7	AAw	AA01	27	0.29	AA01
073	6cik_G_DT7_DT8	NAN	NANT	0	0.66	AB02
074	6cik_G_DT8_DT9	BBB	BB00	27	0.45	BB00
075	6cik_G_DT9_DG10	B-A	BA10	47	0.42	BA10
076	6cik_G_DG10_DT11	AAA	AA03	17	0.34	AA03
077	6cik_G_DT11_DC12	AAA	AA09	72	0.24	AA09
078	6cik_G_DC12_DT13	NAN	NANT	0	0.64	AA10
079	6cik_G_DT13_DG14	NAN	NANT	0	0.40	AA11
080	6cik_G_DG14_DG15	NAN	NANT	0	0.70	AB02
081	6cik_G_DG15_DC16	NAN	NANT	0	0.58	AA01
082	6cik_G_DC16_DT17	NAN	NANT	0	0.48	AB02
083	6cik_G_DT17_DT18	BBB	BB00	57	0.24	BB00
084	6cik_G_DT18_DC19	miB	BB13	69	0.30	BB13
085	6cik_G_DC19_DA20	BBB	BB00	15	0.54	BB00
086	6cik_G_DA20_DC21	BBB	BB00	91	0.15	BB00
087	6cik_G_DC21_DA22	NAN	NANT	0	0.40	BA08
088	6cik_G_DA22_DC23	NAN	NANT	0	0.87	AB02
089	6cik_G_DC23_DT24	BBB	BB00	27	0.40	BB00
090	6cik_G_DT24_DT25	BBB	BB00	44	0.45	BB00
091	6cik_G_DT25_DG26	B12	BB04	17	0.36	BB04
092	6cik_G_DG26_DA27	BB2	BB07	57	0.21	BB07
093	6cik_G_DA27_DT28	miB	BB13	57	0.25	BB13
094	6cik_G_DT28_DT29	BBw	BB16	47	0.59	BB16
095	6cik_G_DT29_DT30	BBw	BB02	64	0.24	BB02
096	6cik_G_DT30_DG31	BBB	BB00	32	0.26	BB00
097	6cik_G_DG31_DC32	B-A	BA05	68	0.23	BA05
098	6cik_G_DC32_DA33	BBB	BB00	17	0.38	BB00
099	6cik_G_DA33_DT34	B-A	BA01	39	0.23	BA01
100	6cik_G_DT34_DC35	AAA	AA00	14	0.39	AA00
101	6cik_G_DC35_DA36	A-B	AB03	65	0.35	AB03
102	6cik_G_DA36_DC37	BBB	BB00	11	0.31	BB00
103	6cik_G_DC37_DT38	NAN	NANT	0	0.70	BA10
104	6cik_G_DT38_DG39	A-B	AB03	55	0.44	AB03
105	6cik_G_DG39_DT40	BBB	BB00	55	0.18	BB00
106	6cik_G_DT40_DG41	B12	BB04	85	0.13	BB04
107	6cik_G_DG41_DT42	BBB	BB00	29	0.17	BB00
108	6cik_G_DT42_DA43	B12	BB04	47	0.46	BB04
109	6cik_G_DA43_DA44	BB2	BB07	77	0.25	BB07
110	6cik_G_DA44_DG45	BBB	BB00	36	0.22	BB00
111	6cik_G_DG45_DA46	BBw	BB11	42	0.49	BB11
112	6cik_G_DA46_DC47	miB	BB15	48	0.47	BB15
113	6cik_G_DC47_DA48	B12	BB04	83	0.25	BB04
114	6cik_G_DA48_DG49	NAN	NANT	0	0.37	BB02
115	6cik_G_DG49_DG50	BB2	BB07	65	0.26	BB07
116	6cik_G_DG50_DC51	BB2	BB07	29	0.36	BB07
117	6cik_G_DC51_DC52	BBB	BB00	85	0.19	BB00
118	6cik_G_DC52_DA53	B12	BB04	63	0.19	BB04
119	6cik_J_DT5_DG6	NAN	NANT	0	0.71	AB02
120	6cik_J_DG6_DG7	NAN	NANT	0	0.93	BB13
121	6cik_J_DG7_DC8	NAN	NANT	0	0.68	BB15
122	6cik_J_DC8_DC9	BB2	BB07	38	0.28	BB07
123	6cik_J_DC9_DT10	BBB	BB00	62	0.28	BB00
124	6cik_J_DT10_DG11	BBB	BB00	77	0.24	BB00
125	6cik_J_DG11_DT12	BBB	BB00	75	0.35	BB00
126	6cik_J_DT12_DC13	BBB	BB00	78	0.20	BB00
127	6cik_J_DC13_DT14	BBB	BB00	85	0.28	BB00
128	6cik_J_DT14_DT15	BBB	BB00	56	0.32	BB00
129	6cik_J_DT15_DA16	B12	BB04	68	0.25	BB04
130	6cik_M_DC17_DA18	NAN	NANT	0	0.58	BB16
131	6cik_M_DA18_DC19	BBB	BB00	35	0.27	BB00
132	6cik_M_DC19_DA20	BB2	BB07	21	0.26	BB07
133	6cik_M_DA20_DG21	BBw	BB17	29	0.49	BB17
134	6cik_M_DG21_DT22	B-A	BA08	76	0.39	BA08
135	6cik_M_DT22_DG23	A-B	AB01	43	0.26	AB01
136	6cik_M_DG23_DA24	BBB	BB00	66	0.25	BB00
137	6cik_M_DA24_DT25	BBB	BB01	85	0.17	BB01
138	6cik_M_DT25_DG26	BBB	BB00	15	0.35	BB00
139	6cik_M_DG26_DC27	B12	BB04	54	0.22	BB04
140	6cik_M_DC27_DA28	B12	BB04	73	0.19	BB04
141	6cik_M_DA28_DA29	B-A	BA01	12	0.29	BA01
142	6cik_M_DA29_DA30	NAN	NANT	0	0.55	BB08
143	6cik_M_DA30_DT31	BBB	BB01	40	0.48	BB01
144	6cik_M_DT31_DC32	miB	BB15	69	0.31	BB15
145	6cik_M_DC32_DA33	miB	BB10	58	0.35	BB10
146	6cik_M_DA33_DA34	AAA	AA02	14	0.39	AA02
147	6cik_M_DA34_DG35	AAA	AA02	16	0.30	AA02
148	6cik_M_DG35_DT36	NAN	NANT	0	0.41	AB05
149	6cik_M_DT36_DG37	NAN	NANT	0	0.52	BB10
150	6cik_M_DG37_DT38	NAN	NANT	0	0.55	AA01
151	6cik_M_DT38_DG39	NAN	NANT	0	0.42	BB16
152	6cik_M_DG39_DA40	BBB	BB00	84	0.14	BB00
153	6cik_M_DA40_DA41	BBB	BB00	68	0.13	BB00
154	6cik_M_DA41_DG42	BBB	BB00	57	0.16	BB00
155	6cik_M_DG42_DC43	BBB	BB00	74	0.20	BB00
156	6cik_M_DC43_DC44	BBB	BB01	20	0.35	BB01
157	6cik_M_DC44_DA45	A-B	AB03	73	0.40	AB03
158	6cik_M_DA45_DG46	NAN	NANT	0	0.77	BB02
159	6cik_M_DG46_DA47	B12	BB04	39	0.42	BB04
160	6cik_M_DA47_DC48	BBB	BB00	81	0.25	BB00
161	6cik_M_DC48_DA49	B12	BB04	21	0.32	BB04
162	6cik_M_DA49_DA50	B-A	BA08	83	0.37	BA08
163	6cik_M_DA50_DA51	A-B	AB02	44	0.47	AB02
164	6cik_M_DA51_DA52	BBw	BB02	78	0.23	BB02
165	6cik_M_DA52_DA53	miB	BB12	35	0.61	BB12
166	6cik_M_DA53_DC54	NAN	NANT	0	0.68	AA01
167	6cik_M_DC54_DC55	AAw	AA06	14	0.39	AA06

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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Results of the assignment of 167 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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