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Conformers: ABBIImiBZICOPNSYNN
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Proteus vulgaris HigA antitoxin bound to DNA

Results of the assignment of 120 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0016chv_I_DG1_DT2AAAAA00730.28 AA00
0026chv_I_DT2_DA3A-BAB01300.34 AB01
0036chv_I_DA3_DT4BBBBB00710.22 BB00
0046chv_I_DT4_DT5BBBBB00880.22 BB00
0056chv_I_DT5_DA6BB2BB07690.27 BB07
0066chv_I_DA6_DC7B-ABA05320.16 BA05
0076chv_I_DC7_DA8A-BAB03750.21 AB03
0086chv_I_DA8_DC9BBBBB00860.20 BB00
0096chv_I_DC9_DA10B12BB04650.22 BB04
0106chv_I_DA10_DC11B12BB04340.23 BB04
0116chv_I_DC11_DC12BBBBB00730.22 BB00
0126chv_I_DC12_DA13BB2BB07730.17 BB07
0136chv_I_DA13_DT14BBBBB00900.23 BB00
0146chv_I_DT14_DG15B12BB04890.16 BB04
0156chv_I_DG15_DT16BBBBB00850.16 BB00
0166chv_I_DT16_DA17BBBBB00700.29 BB00
0176chv_I_DA17_DA18B-ABA08550.26 BA08
0186chv_I_DA18_DT19B-ABA05490.25 BA05
0196chv_I_DT19_DA20AAAAA02150.48 AA02
0206chv_I_DA20_DC21AAAAA02190.49 AA02
0216chv_J_DG1_DT2AAAAA08790.15 AA08
0226chv_J_DT2_DA3A-BAB05280.15 AB05
0236chv_J_DA3_DT4BBBBB00430.26 BB00
0246chv_J_DT4_DT5BBBBB00540.33 BB00
0256chv_J_DT5_DA6BB2BB07800.23 BB07
0266chv_J_DA6_DC7BBBBB01770.17 BB01
0276chv_J_DC7_DA8BBBBB00270.28 BB00
0286chv_J_DA8_DT9BBBBB00870.17 BB00
0296chv_J_DT9_DG10B12BB04710.23 BB04
0306chv_J_DG10_DG11BBBBB00860.13 BB00
0316chv_J_DG11_DT12BBBBB00740.21 BB00
0326chv_J_DT12_DG13BB2BB07870.17 BB07
0336chv_J_DG13_DT14BBBBB00850.24 BB00
0346chv_J_DT14_DG15B12BB04920.13 BB04
0356chv_J_DG15_DT16BBBBB01690.15 BB01
0366chv_J_DT16_DA17BBBBB01540.35 BB01
0376chv_J_DA17_DA18B-ABA08780.25 BA08
0386chv_J_DA18_DT19AAAAA00200.47 AA00
0396chv_J_DT19_DA20AAAAA00230.48 AA00
0406chv_J_DA20_DC21AAAAA00320.46 AA00
0416chv_E_DG1_DT2AAAAA08720.20 AA08
0426chv_E_DT2_DA3A-BAB05540.19 AB05
0436chv_E_DA3_DT4BBBBB00730.20 BB00
0446chv_E_DT4_DT5miBBB15490.32 BB15
0456chv_E_DT5_DA6B12BB04340.31 BB04
0466chv_E_DA6_DC7BBBBB01570.21 BB01
0476chv_E_DC7_DA8BBBBB00450.33 BB00
0486chv_E_DA8_DC9BBBBB00750.19 BB00
0496chv_E_DC9_DA10B12BB04330.26 BB04
0506chv_E_DA10_DC11BBBBB00460.28 BB00
0516chv_E_DC11_DC12BBBBB00720.19 BB00
0526chv_E_DC12_DA13BB2BB07610.27 BB07
0536chv_E_DA13_DT14BBBBB00910.22 BB00
0546chv_E_DT14_DG15B12BB04910.13 BB04
0556chv_E_DG15_DT16BBBBB00880.13 BB00
0566chv_E_DT16_DA17BBBBB01450.33 BB01
0576chv_E_DA17_DA18B-ABA08650.27 BA08
0586chv_E_DA18_DT19B-ABA05410.21 BA05
0596chv_E_DT19_DA20AAAAA02560.48 AA02
0606chv_E_DA20_DC21BBBBB01380.24 BB01
0616chv_F_DG1_DT2AAAAA00710.29 AA00
0626chv_F_DT2_DA3A-BAB05250.20 AB05
0636chv_F_DA3_DT4BBwBB02400.31 BB02
0646chv_F_DT4_DT5BBBBB00300.22 BB00
0656chv_F_DT5_DA6BB2BB07620.25 BB07
0666chv_F_DA6_DC7B-ABA05600.15 BA05
0676chv_F_DC7_DA8A-BAB03860.20 AB03
0686chv_F_DA8_DT9BBBBB00680.26 BB00
0696chv_F_DT9_DG10B12BB04810.20 BB04
0706chv_F_DG10_DG11BBBBB00660.19 BB00
0716chv_F_DG11_DT12BBBBB00690.25 BB00
0726chv_F_DT12_DG13BB2BB07780.17 BB07
0736chv_F_DG13_DT14BBBBB00830.25 BB00
0746chv_F_DT14_DG15B12BB04840.18 BB04
0756chv_F_DG15_DT16BBBBB01750.14 BB01
0766chv_F_DT16_DA17BBBBB00570.29 BB00
0776chv_F_DA17_DA18B-ABA08740.26 BA08
0786chv_F_DA18_DT19BBBBB01410.19 BB01
0796chv_F_DT19_DA20B-ABA05630.21 BA05
0806chv_F_DA20_DC21AAAAA00500.42 AA00
0816chv_K_DG1_DT2AAAAA08350.33 AA08
0826chv_K_DT2_DA3A-BAB01210.36 AB01
0836chv_K_DA3_DT4BBBBB00580.25 BB00
0846chv_K_DT4_DT5BBBBB00840.23 BB00
0856chv_K_DT5_DA6BB2BB07740.32 BB07
0866chv_K_DA6_DC7B-ABA05850.16 BA05
0876chv_K_DC7_DA8BBBBB01270.27 BB01
0886chv_K_DA8_DC9B-ABA01940.09 BA01
0896chv_K_DC9_DA10A-BAB01760.24 AB01
0906chv_K_DA10_DC11BBBBB00830.16 BB00
0916chv_K_DC11_DC12miBBB15650.24 BB15
0926chv_K_DC12_DA13B12BB04510.25 BB04
0936chv_K_DA13_DT14BBBBB00870.23 BB00
0946chv_K_DT14_DG15B12BB04810.15 BB04
0956chv_K_DG15_DT16BBBBB00900.13 BB00
0966chv_K_DT16_DA17BBBBB00740.28 BB00
0976chv_K_DA17_DA18NANNANT00.34 BA08
0986chv_K_DA18_DT19AAAAA00650.24 AA00
0996chv_K_DT19_DA20AAAAA00850.30 AA00
1006chv_K_DA20_DC21AAAAA00890.30 AA00
1016chv_L_DG1_DT2AAAAA00690.32 AA00
1026chv_L_DT2_DA3A-BAB0180.36 AB01
1036chv_L_DA3_DT4BBBBB01380.20 BB01
1046chv_L_DT4_DT5BBBBB00680.27 BB00
1056chv_L_DT5_DA6BB2BB07870.25 BB07
1066chv_L_DA6_DC7BBBBB00880.19 BB00
1076chv_L_DC7_DA8BBBBB00180.39 BB00
1086chv_L_DA8_DT9B-ABA05660.13 BA05
1096chv_L_DT9_DG10A-BAB01490.24 AB01
1106chv_L_DG10_DG11BBBBB00770.16 BB00
1116chv_L_DG11_DT12BBBBB00800.25 BB00
1126chv_L_DT12_DG13BB2BB07580.18 BB07
1136chv_L_DG13_DT14BBBBB01460.23 BB01
1146chv_L_DT14_DG15BBBBB00110.28 BB00
1156chv_L_DG15_DT16BBBBB01470.20 BB01
1166chv_L_DT16_DA17BBBBB00470.32 BB00
1176chv_L_DA17_DA18B-ABA08570.26 BA08
1186chv_L_DA18_DT19B-ABA05560.16 BA05
1196chv_L_DT19_DA20AAAAA02520.47 AA02
1206chv_L_DA20_DC21NANNANT00.46 AA01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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