Conformers:
ABBIImiBZICOPNSYNN
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Zinc finger Domain of WT1(-KTS form) with 13+1mer Oligonucleotide with 3' Triplet TGT
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 48 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 01 | 6b0q_E_DG2_DC3 | BBB | BB00 | 81 | 0.22 |
| 02 | 6b0q_E_DC3_DG4 | B12 | BB04 | 59 | 0.22 |
| 03 | 6b0q_E_DG4_DT5 | BBB | BB00 | 64 | 0.40 |
| 04 | 6b0q_E_DT5_DG6 | B-A | BA13 | 61 | 0.29 |
| 05 | 6b0q_E_DG6_DG7 | A-B | AB04 | 59 | 0.34 |
| 06 | 6b0q_E_DG7_DG8 | BBw | BB02 | 48 | 0.34 |
| 07 | 6b0q_E_DG8_DA9 | B-A | BA05 | 70 | 0.34 |
| 08 | 6b0q_E_DA9_DG10 | BBB | BB00 | 50 | 0.39 |
| 09 | 6b0q_E_DG10_DT11 | B-A | BA05 | 83 | 0.13 |
| 10 | 6b0q_E_DT11_DG12 | BBB | BB01 | 27 | 0.25 |
| 11 | 6b0q_E_DG12_DT13 | BBB | BB01 | 41 | 0.25 |
| 12 | 6b0q_E_DT13_DT14 | B-A | BA05 | 33 | 0.22 |
| 13 | 6b0q_F_DA1_DA2 | BBB | BB00 | 82 | 0.20 |
| 14 | 6b0q_F_DA2_DC3 | B-A | BA05 | 86 | 0.09 |
| 15 | 6b0q_F_DC3_DA4 | B-A | BA05 | 50 | 0.33 |
| 16 | 6b0q_F_DA4_DC5 | A-B | AB01 | 63 | 0.32 |
| 17 | 6b0q_F_DC5_DT6 | BBB | BB01 | 74 | 0.28 |
| 18 | 6b0q_F_DT6_DC7 | B-A | BA01 | 15 | 0.26 |
| 19 | 6b0q_F_DC7_DC8 | A-B | AB01 | 68 | 0.23 |
| 20 | 6b0q_F_DC8_DC9 | BBB | BB01 | 79 | 0.21 |
| 21 | 6b0q_F_DC9_DA10 | BBB | BB01 | 81 | 0.15 |
| 22 | 6b0q_F_DA10_DC11 | BBB | BB00 | 17 | 0.34 |
| 23 | 6b0q_F_DC11_DG12 | BBB | BB01 | 71 | 0.14 |
| 24 | 6b0q_F_DG12_DC13 | BBB | BB00 | 49 | 0.31 |
| 25 | 6b0q_B_DG2_DC3 | BBB | BB00 | 78 | 0.23 |
| 26 | 6b0q_B_DC3_DG4 | B12 | BB04 | 54 | 0.21 |
| 27 | 6b0q_B_DG4_DT5 | BBB | BB00 | 58 | 0.39 |
| 28 | 6b0q_B_DT5_DG6 | B-A | BA13 | 70 | 0.23 |
| 29 | 6b0q_B_DG6_DG7 | A-B | AB05 | 16 | 0.26 |
| 30 | 6b0q_B_DG7_DG8 | BBB | BB00 | 76 | 0.20 |
| 31 | 6b0q_B_DG8_DA9 | BBB | BB01 | 95 | 0.12 |
| 32 | 6b0q_B_DA9_DG10 | BBB | BB00 | 43 | 0.47 |
| 33 | 6b0q_B_DG10_DT11 | B-A | BA05 | 73 | 0.15 |
| 34 | 6b0q_B_DT11_DG12 | BBB | BB01 | 24 | 0.27 |
| 35 | 6b0q_B_DG12_DT13 | BBB | BB00 | 73 | 0.25 |
| 36 | 6b0q_B_DT13_DT14 | B-A | BA01 | 41 | 0.25 |
| 37 | 6b0q_C_DA2_DA3 | BBB | BB00 | 93 | 0.12 |
| 38 | 6b0q_C_DA3_DC4 | B-A | BA05 | 86 | 0.07 |
| 39 | 6b0q_C_DC4_DA5 | B-A | BA05 | 57 | 0.31 |
| 40 | 6b0q_C_DA5_DC6 | A-B | AB01 | 78 | 0.28 |
| 41 | 6b0q_C_DC6_DT7 | BBB | BB01 | 75 | 0.34 |
| 42 | 6b0q_C_DT7_DC8 | B-A | BA10 | 51 | 0.35 |
| 43 | 6b0q_C_DC8_DC9 | A-B | AB05 | 67 | 0.17 |
| 44 | 6b0q_C_DC9_DC10 | BBB | BB01 | 78 | 0.27 |
| 45 | 6b0q_C_DC10_DA11 | B-A | BA05 | 81 | 0.25 |
| 46 | 6b0q_C_DA11_DC12 | BBB | BB00 | 16 | 0.41 |
| 47 | 6b0q_C_DC12_DG13 | BBB | BB00 | 85 | 0.19 |
| 48 | 6b0q_C_DG13_DC14 | B-A | BA01 | 66 | 0.18 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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