DNATCO v4.1: results

Crystal structures of E.coli arginyl-trna synthetase (argrs) in complex with substrate TRNA(Arg)

Results of the assignment of 123 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	5yyn_B_G901_C902	NAN	NANT	0	0.53	AA01
002	5yyn_B_C902_G903	AAA	AA00	51	0.42	AA00
003	5yyn_B_G903_C904	AAA	AA00	43	0.33	AA00
004	5yyn_B_C904_U905	AAA	AA00	90	0.21	AA00
005	5yyn_B_U905_C906	AAw	AA01	83	0.16	AA01
006	5yyn_B_C906_G907	A-B	AB05	90	0.20	AB05
007	5yyn_B_G907_U908	OPN	OP11	86	0.22	OP11
008	5yyn_B_U908_A909	ICL	IC03	10	0.84	IC03
009	5yyn_B_A909_G910	NAN	NANT	0	1.36	OP26
010	5yyn_B_G910_C911	AAA	AA00	32	0.32	AA00
011	5yyn_B_C911_U912	AAA	AA00	93	0.17	AA00
012	5yyn_B_U912_C913	AAw	AA01	76	0.22	AA01
013	5yyn_B_C913_A914	NAN	NANT	0	0.57	AA06
014	5yyn_B_A914_A915	AAA	AA08	64	0.41	AA08
015	5yyn_B_A915_U916	OPN	OP02	11	0.53	OP02
016	5yyn_B_U916_U917	NAN	NANT	0	1.01	OP01
017	5yyn_B_U917_G918	NAN	NANT	0	2.27	OPS1
018	5yyn_B_G918_G919	NAN	NANT	0	0.83	BB08
019	5yyn_B_G919_A920	NAN	NANT	0	1.51	OP22
020	5yyn_B_A920_U921	NAN	NANT	0	1.65	OP04
021	5yyn_B_U921_A922	NAN	NANT	0	0.33	OP13
022	5yyn_B_A922_G923	NAN	NANT	0	0.91	AA11
023	5yyn_B_G923_A924	AAw	AA06	48	0.39	AA06
024	5yyn_B_A924_G925	AAA	AA08	79	0.18	AA08
025	5yyn_B_G925_C926	AAw	AA01	70	0.30	AA01
026	5yyn_B_C926_A927	AAA	AA08	73	0.45	AA08
027	5yyn_B_A927_U928	AAA	AA00	66	0.28	AA00
028	5yyn_B_U928_C929	NAN	NANT	0	0.44	AA06
029	5yyn_B_A942_G943	NAN	NANT	0	0.67	AA08
030	5yyn_B_G943_A944	AAA	AA00	24	0.57	AA00
031	5yyn_B_A944_A945	AAA	AA00	68	0.26	AA00
032	5yyn_B_A945_G946	AAA	AA08	89	0.24	AA08
033	5yyn_B_G946_G947	NAN	NANT	0	0.87	IC03
034	5yyn_B_G947_U948	NAN	NANT	0	1.12	OP13
035	5yyn_B_U948_U949	NAN	NANT	0	1.34	OP17
036	5yyn_B_U949_A950	NAN	NANT	0	1.52	OP05
037	5yyn_B_A950_G951	AAA	AA00	46	0.25	AA00
038	5yyn_B_G951_G952	AAA	AA00	67	0.22	AA00
039	5yyn_B_G952_G953	AAA	AA00	83	0.20	AA00
040	5yyn_B_G953_G954	AAA	AA00	79	0.18	AA00
041	5yyn_B_G954_U955	AAA	AA00	51	0.18	AA00
042	5yyn_B_U955_U956	A-B	AB04	47	0.27	AB04
043	5yyn_B_U956_C957	NAN	NANT	0	0.51	OP04
044	5yyn_B_C957_G958	AAA	AA00	55	0.35	AA00
045	5yyn_B_G958_A959	NAN	NANT	0	1.12	AB02
046	5yyn_B_A959_A960	NAN	NANT	0	0.29	OP25
047	5yyn_B_A960_U961	A-B	AB05	78	0.38	AB05
048	5yyn_B_U961_C962	OPN	OP12	37	0.29	OP12
049	5yyn_B_C962_C963	NAN	NANT	0	0.72	AB02
050	5yyn_B_C963_U964	AAA	AA00	74	0.12	AA00
051	5yyn_B_U964_C965	AAw	AA01	78	0.20	AA01
052	5yyn_B_C965_U966	AAA	AA08	82	0.18	AA08
053	5yyn_B_U966_C967	AAA	AA08	87	0.15	AA08
054	5yyn_B_C967_G968	AAA	AA00	78	0.22	AA00
055	5yyn_B_G968_A969	AAA	AA00	59	0.27	AA00
056	5yyn_B_A969_G970	AAA	AA00	85	0.13	AA00
057	5yyn_B_G970_C971	AAA	AA00	89	0.18	AA00
058	5yyn_B_C971_G972	AAw	AA01	54	0.32	AA01
059	5yyn_B_G972_C973	NAN	NANT	0	0.54	AA04
060	5yyn_B_C973_G974	NAN	NANT	0	0.62	AA10
061	5yyn_B_G974_C975	NAN	NANT	0	0.71	AA07
062	5yyn_D_G901_C902	NAN	NANT	0	0.33	AA06
063	5yyn_D_C902_G903	AAA	AA00	61	0.36	AA00
064	5yyn_D_G903_C904	AAA	AA00	56	0.29	AA00
065	5yyn_D_C904_U905	AAA	AA00	82	0.20	AA00
066	5yyn_D_U905_C906	AAw	AA01	74	0.16	AA01
067	5yyn_D_C906_G907	A-B	AB05	82	0.27	AB05
068	5yyn_D_G907_U908	OPN	OP11	82	0.28	OP11
069	5yyn_D_U908_A909	NAN	NANT	0	0.84	IC02
070	5yyn_D_A909_G910	NAN	NANT	0	1.47	OP04
071	5yyn_D_G910_C911	AAu	AA12	45	0.45	AA12
072	5yyn_D_C911_U912	AAA	AA00	88	0.23	AA00
073	5yyn_D_U912_C913	AAw	AA10	69	0.31	AA10
074	5yyn_D_C913_A914	AAw	AA01	15	0.43	AA01
075	5yyn_D_A914_A915	AAA	AA08	70	0.43	AA08
076	5yyn_D_A915_U916	OPN	OP01	10	0.65	OP01
077	5yyn_D_U916_U917	NAN	NANT	0	1.66	OP31
078	5yyn_D_U917_G918	NAN	NANT	0	1.54	OP16
079	5yyn_D_G918_G919	NAN	NANT	0	0.82	BB08
080	5yyn_D_G919_A920	NAN	NANT	0	1.53	OP22
081	5yyn_D_A920_U921	NAN	NANT	0	1.68	OP04
082	5yyn_D_U921_A922	OPN	OP13	86	0.26	OP13
083	5yyn_D_A922_G923	NAN	NANT	0	0.91	AA11
084	5yyn_D_G923_A924	AAw	AA11	66	0.38	AA11
085	5yyn_D_A924_G925	AAA	AA08	71	0.22	AA08
086	5yyn_D_G925_C926	AAw	AA01	81	0.22	AA01
087	5yyn_D_C926_A927	AAA	AA08	54	0.44	AA08
088	5yyn_D_A927_U928	AAA	AA00	85	0.21	AA00
089	5yyn_D_U940_C941	NAN	NANT	0	0.64	AA04
090	5yyn_D_C941_A942	AAA	AA09	19	0.41	AA09
091	5yyn_D_A942_G943	NAN	NANT	0	0.35	AA00
092	5yyn_D_G943_A944	AAA	AA00	81	0.22	AA00
093	5yyn_D_A944_A945	AAA	AA00	71	0.23	AA00
094	5yyn_D_A945_G946	AAA	AA08	78	0.27	AA08
095	5yyn_D_G946_G947	NAN	NANT	0	0.94	IC03
096	5yyn_D_G947_U948	NAN	NANT	0	1.08	OP13
097	5yyn_D_U948_U949	NAN	NANT	0	1.32	OP11
098	5yyn_D_U949_A950	NAN	NANT	0	1.48	OP05
099	5yyn_D_A950_G951	AAA	AA00	53	0.26	AA00
100	5yyn_D_G951_G952	AAA	AA00	58	0.26	AA00
101	5yyn_D_G952_G953	AAA	AA00	77	0.22	AA00
102	5yyn_D_G953_G954	AAA	AA08	87	0.22	AA08
103	5yyn_D_G954_U955	AAA	AA00	71	0.19	AA00
104	5yyn_D_U955_U956	A-B	AB04	50	0.31	AB04
105	5yyn_D_U956_C957	NAN	NANT	0	0.48	OP04
106	5yyn_D_C957_G958	AAA	AA00	56	0.38	AA00
107	5yyn_D_G958_A959	NAN	NANT	0	1.12	AB02
108	5yyn_D_A959_A960	NAN	NANT	0	0.29	OP25
109	5yyn_D_A960_U961	A-B	AB05	79	0.39	AB05
110	5yyn_D_U961_C962	NAN	NANT	0	0.34	OP12
111	5yyn_D_C962_C963	NAN	NANT	0	0.66	AB02
112	5yyn_D_C963_U964	AAA	AA00	87	0.14	AA00
113	5yyn_D_U964_C965	AAA	AA08	85	0.25	AA08
114	5yyn_D_C965_U966	AAA	AA00	92	0.21	AA00
115	5yyn_D_U966_C967	AAA	AA00	91	0.15	AA00
116	5yyn_D_C967_G968	AAA	AA00	76	0.21	AA00
117	5yyn_D_G968_A969	AAA	AA00	35	0.35	AA00
118	5yyn_D_A969_G970	AAA	AA00	92	0.11	AA00
119	5yyn_D_G970_C971	AAA	AA00	89	0.17	AA00
120	5yyn_D_C971_G972	AAw	AA01	41	0.38	AA01
121	5yyn_D_G972_C973	NAN	NANT	0	0.74	AA10
122	5yyn_D_C973_G974	NAN	NANT	0	0.77	AA10
123	5yyn_D_G974_C975	NAN	NANT	0	1.03	AA04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 123 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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