DNATCO v4.1: results

Structure of two RcsB dimers bound to two parallel DNAs.

Results of the assignment of 68 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	5vxn_E_DT1_DT2	BBB	BB00	57	0.18	BB00
02	5vxn_E_DT2_DT3	B-A	BA05	81	0.17	BA05
03	5vxn_E_DT3_DA4	NAN	NANT	0	0.45	BB02
04	5vxn_E_DA4_DG5	B12	BB04	25	0.51	BB04
05	5vxn_E_DG5_DG6	BBB	BB00	66	0.32	BB00
06	5vxn_E_DG6_DA7	BBB	BB00	82	0.20	BB00
07	5vxn_E_DA7_DA8	BBB	BB00	87	0.18	BB00
08	5vxn_E_DA8_DA9	BBB	BB00	84	0.21	BB00
09	5vxn_E_DA9_DA10	B12	BB04	71	0.23	BB04
10	5vxn_E_DA10_DA11	B-A	BA01	17	0.18	BA01
11	5vxn_E_DA11_DT12	BBB	BB01	41	0.34	BB01
12	5vxn_E_DT12_DC13	BBB	BB00	54	0.22	BB00
13	5vxn_E_DC13_DT14	miB	BB13	59	0.28	BB13
14	5vxn_E_DT14_DT15	BBw	BB16	53	0.34	BB16
15	5vxn_E_DT15_DA16	miB	BB15	64	0.25	BB15
16	5vxn_E_DA16_DG17	B12	BB04	45	0.28	BB04
17	5vxn_E_DG17_DA18	NAN	NANT	0	0.53	AA10
18	5vxn_F_DT19_DC20	BBB	BB00	78	0.16	BB00
19	5vxn_F_DC20_DT21	B-A	BA05	84	0.14	BA05
20	5vxn_F_DT21_DA22	NAN	NANT	0	0.27	BB01
21	5vxn_F_DA22_DA23	B12	BB04	21	0.44	BB04
22	5vxn_F_DA23_DG24	NAN	NANT	0	0.53	BB13
23	5vxn_F_DG24_DA25	NAN	NANT	0	0.70	BB17
24	5vxn_F_DA25_DT26	BBw	BB02	17	0.30	BB02
25	5vxn_F_DT26_DT27	BBB	BB00	57	0.31	BB00
26	5vxn_F_DT27_DT28	BBB	BB00	34	0.20	BB00
27	5vxn_F_DT28_DT29	B-A	BA05	61	0.27	BA05
28	5vxn_F_DT29_DT30	B-A	BA05	27	0.44	BA05
29	5vxn_F_DT30_DC31	BBB	BB01	21	0.22	BB01
30	5vxn_F_DC31_DC32	NAN	NANT	0	0.43	BB17
31	5vxn_F_DC32_DT33	BBB	BB01	40	0.29	BB01
32	5vxn_F_DT33_DA34	BBB	BB01	44	0.23	BB01
33	5vxn_F_DA34_DA35	NAN	NANT	0	0.77	BB12
34	5vxn_F_DA35_DA36	NAN	NANT	0	0.77	AA10
35	5vxn_G_DT1_DT2	BBB	BB01	79	0.16	BB01
36	5vxn_G_DT2_DT3	B-A	BA05	84	0.17	BA05
37	5vxn_G_DT3_DA4	NAN	NANT	0	0.48	BB02
38	5vxn_G_DA4_DG5	B12	BB04	27	0.48	BB04
39	5vxn_G_DG5_DG6	BBB	BB00	72	0.28	BB00
40	5vxn_G_DG6_DA7	BBB	BB00	86	0.17	BB00
41	5vxn_G_DA7_DA8	BBB	BB00	89	0.15	BB00
42	5vxn_G_DA8_DA9	BBB	BB00	75	0.22	BB00
43	5vxn_G_DA9_DA10	B12	BB04	57	0.28	BB04
44	5vxn_G_DA10_DA11	B-A	BA08	64	0.36	BA08
45	5vxn_G_DA11_DT12	BBB	BB01	56	0.29	BB01
46	5vxn_G_DT12_DC13	BBB	BB00	46	0.20	BB00
47	5vxn_G_DC13_DT14	miB	BB12	38	0.54	BB12
48	5vxn_G_DT14_DT15	BBw	BB16	47	0.34	BB16
49	5vxn_G_DT15_DA16	miB	BB15	56	0.26	BB15
50	5vxn_G_DA16_DG17	B12	BB04	61	0.24	BB04
51	5vxn_G_DG17_DA18	NAN	NANT	0	0.52	AA10
52	5vxn_H_DT19_DC20	BBB	BB00	83	0.16	BB00
53	5vxn_H_DC20_DT21	B-A	BA05	86	0.15	BA05
54	5vxn_H_DT21_DA22	A-B	AB01	18	0.35	AB01
55	5vxn_H_DA22_DA23	BB2	BB07	20	0.47	BB07
56	5vxn_H_DA23_DG24	NAN	NANT	0	0.50	BB13
57	5vxn_H_DG24_DA25	NAN	NANT	0	0.65	BB17
58	5vxn_H_DA25_DT26	miB	BB15	43	0.31	BB15
59	5vxn_H_DT26_DT27	BBB	BB00	42	0.29	BB00
60	5vxn_H_DT27_DT28	BBB	BB01	75	0.17	BB01
61	5vxn_H_DT28_DT29	B-A	BA05	52	0.20	BA05
62	5vxn_H_DT29_DT30	B-A	BA05	45	0.43	BA05
63	5vxn_H_DT30_DC31	BBB	BB01	38	0.17	BB01
64	5vxn_H_DC31_DC32	NAN	NANT	0	0.33	BB03
65	5vxn_H_DC32_DT33	BBB	BB01	46	0.30	BB01
66	5vxn_H_DT33_DA34	BBB	BB01	26	0.21	BB01
67	5vxn_H_DA34_DA35	BB2	BB07	60	0.23	BB07
68	5vxn_H_DA35_DA36	B-A	BA01	39	0.26	BA01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 68 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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