DNATCO v4.1: results

Solution Structure of a DNA Dodecamer with 8-oxoguanine at the 4th position and 5-methylcytosine at the 9th position

Results of the assignment of 264 detected steps in 12 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	5trn-m10_A_DC1_DG2	BBB	BB01	22	0.35	BB01
002	5trn-m11_A_DC1_DG2	BBB	BB01	29	0.35	BB01
003	5trn-m12_A_DC1_DG2	BBB	BB01	22	0.35	BB01
004	5trn-m1_A_DC1_DG2	BBB	BB01	32	0.34	BB01
005	5trn-m2_A_DC1_DG2	BBB	BB01	28	0.33	BB01
006	5trn-m3_A_DC1_DG2	BBB	BB01	37	0.32	BB01
007	5trn-m4_A_DC1_DG2	BBB	BB01	20	0.34	BB01
008	5trn-m5_A_DC1_DG2	BBB	BB01	36	0.33	BB01
009	5trn-m6_A_DC1_DG2	BBB	BB00	22	0.44	BB00
010	5trn-m7_A_DC1_DG2	BBB	BB01	34	0.33	BB01
011	5trn-m8_A_DC1_DG2	BBB	BB01	43	0.32	BB01
012	5trn-m9_A_DC1_DG2	BBB	BB00	20	0.45	BB00
013	5trn-m10_A_DG2_DC3	BBB	BB00	27	0.35	BB00
014	5trn-m11_A_DG2_DC3	BBB	BB00	23	0.36	BB00
015	5trn-m12_A_DG2_DC3	BBB	BB00	27	0.34	BB00
016	5trn-m1_A_DG2_DC3	BBB	BB00	22	0.35	BB00
017	5trn-m2_A_DG2_DC3	BBB	BB00	25	0.35	BB00
018	5trn-m3_A_DG2_DC3	BBB	BB00	18	0.35	BB00
019	5trn-m4_A_DG2_DC3	BBB	BB00	28	0.34	BB00
020	5trn-m5_A_DG2_DC3	BBB	BB00	21	0.35	BB00
021	5trn-m6_A_DG2_DC3	BBB	BB00	40	0.33	BB00
022	5trn-m7_A_DG2_DC3	BBB	BB00	21	0.35	BB00
023	5trn-m8_A_DG2_DC3	BBB	BB00	19	0.36	BB00
024	5trn-m9_A_DG2_DC3	BBB	BB00	38	0.34	BB00
025	5trn-m10_A_DC3_8OG4	BBB	BB00	76	0.30	BB00
026	5trn-m11_A_DC3_8OG4	BBB	BB00	77	0.29	BB00
027	5trn-m12_A_DC3_8OG4	BBB	BB00	77	0.29	BB00
028	5trn-m1_A_DC3_8OG4	BBB	BB00	76	0.30	BB00
029	5trn-m2_A_DC3_8OG4	BBB	BB00	77	0.28	BB00
030	5trn-m3_A_DC3_8OG4	BBB	BB00	78	0.29	BB00
031	5trn-m4_A_DC3_8OG4	BBB	BB00	77	0.28	BB00
032	5trn-m5_A_DC3_8OG4	BBB	BB00	77	0.28	BB00
033	5trn-m6_A_DC3_8OG4	BBB	BB00	78	0.29	BB00
034	5trn-m7_A_DC3_8OG4	BBB	BB00	77	0.29	BB00
035	5trn-m8_A_DC3_8OG4	BBB	BB00	77	0.29	BB00
036	5trn-m9_A_DC3_8OG4	BBB	BB00	78	0.29	BB00
037	5trn-m10_A_8OG4_DA5	BB2	BB07	25	0.56	BB07
038	5trn-m11_A_8OG4_DA5	BB2	BB07	26	0.56	BB07
039	5trn-m12_A_8OG4_DA5	BB2	BB07	26	0.57	BB07
040	5trn-m1_A_8OG4_DA5	BB2	BB07	26	0.56	BB07
041	5trn-m2_A_8OG4_DA5	BB2	BB07	26	0.56	BB07
042	5trn-m3_A_8OG4_DA5	BB2	BB07	26	0.56	BB07
043	5trn-m4_A_8OG4_DA5	BB2	BB07	26	0.56	BB07
044	5trn-m5_A_8OG4_DA5	BB2	BB07	26	0.57	BB07
045	5trn-m6_A_8OG4_DA5	BB2	BB07	26	0.56	BB07
046	5trn-m7_A_8OG4_DA5	BB2	BB07	26	0.56	BB07
047	5trn-m8_A_8OG4_DA5	BB2	BB07	26	0.58	BB07
048	5trn-m9_A_8OG4_DA5	BB2	BB07	26	0.57	BB07
049	5trn-m10_A_DA5_DA6	B12	BB04	53	0.21	BB04
050	5trn-m11_A_DA5_DA6	B12	BB04	53	0.21	BB04
051	5trn-m12_A_DA5_DA6	B12	BB04	53	0.21	BB04
052	5trn-m1_A_DA5_DA6	B12	BB04	53	0.21	BB04
053	5trn-m2_A_DA5_DA6	B12	BB04	53	0.21	BB04
054	5trn-m3_A_DA5_DA6	B12	BB04	53	0.21	BB04
055	5trn-m4_A_DA5_DA6	B12	BB04	53	0.20	BB04
056	5trn-m5_A_DA5_DA6	B12	BB04	53	0.21	BB04
057	5trn-m6_A_DA5_DA6	B12	BB04	53	0.21	BB04
058	5trn-m7_A_DA5_DA6	B12	BB04	53	0.21	BB04
059	5trn-m8_A_DA5_DA6	B12	BB04	53	0.20	BB04
060	5trn-m9_A_DA5_DA6	B12	BB04	52	0.21	BB04
061	5trn-m10_A_DA6_DT7	BBB	BB00	65	0.29	BB00
062	5trn-m11_A_DA6_DT7	BBB	BB00	65	0.29	BB00
063	5trn-m12_A_DA6_DT7	BBB	BB00	65	0.29	BB00
064	5trn-m1_A_DA6_DT7	BBB	BB00	66	0.28	BB00
065	5trn-m2_A_DA6_DT7	BBB	BB00	64	0.31	BB00
066	5trn-m3_A_DA6_DT7	BBB	BB00	65	0.30	BB00
067	5trn-m4_A_DA6_DT7	BBB	BB00	66	0.28	BB00
068	5trn-m5_A_DA6_DT7	BBB	BB00	66	0.28	BB00
069	5trn-m6_A_DA6_DT7	BBB	BB00	66	0.29	BB00
070	5trn-m7_A_DA6_DT7	BBB	BB00	66	0.28	BB00
071	5trn-m8_A_DA6_DT7	BBB	BB00	64	0.30	BB00
072	5trn-m9_A_DA6_DT7	BBB	BB00	65	0.29	BB00
073	5trn-m10_A_DT7_DT8	B-A	BA05	56	0.16	BA05
074	5trn-m11_A_DT7_DT8	B-A	BA05	64	0.15	BA05
075	5trn-m12_A_DT7_DT8	B-A	BA05	66	0.15	BA05
076	5trn-m1_A_DT7_DT8	B-A	BA05	70	0.15	BA05
077	5trn-m2_A_DT7_DT8	B-A	BA05	63	0.14	BA05
078	5trn-m3_A_DT7_DT8	B-A	BA05	68	0.15	BA05
079	5trn-m4_A_DT7_DT8	B-A	BA05	68	0.15	BA05
080	5trn-m5_A_DT7_DT8	B-A	BA05	71	0.14	BA05
081	5trn-m6_A_DT7_DT8	B-A	BA05	73	0.13	BA05
082	5trn-m7_A_DT7_DT8	B-A	BA05	71	0.14	BA05
083	5trn-m8_A_DT7_DT8	B-A	BA05	61	0.15	BA05
084	5trn-m9_A_DT7_DT8	B-A	BA05	64	0.14	BA05
085	5trn-m10_A_DT8_5CM9	B-A	BA05	59	0.25	BA05
086	5trn-m11_A_DT8_5CM9	AAA	AA02	53	0.49	AA02
087	5trn-m12_A_DT8_5CM9	AAA	AA02	49	0.51	AA02
088	5trn-m1_A_DT8_5CM9	AAA	AA02	48	0.50	AA02
089	5trn-m2_A_DT8_5CM9	AAA	AA02	49	0.49	AA02
090	5trn-m3_A_DT8_5CM9	AAA	AA02	44	0.51	AA02
091	5trn-m4_A_DT8_5CM9	AAA	AA02	51	0.49	AA02
092	5trn-m5_A_DT8_5CM9	AAA	AA02	47	0.50	AA02
093	5trn-m6_A_DT8_5CM9	AAA	AA02	52	0.50	AA02
094	5trn-m7_A_DT8_5CM9	AAA	AA02	52	0.49	AA02
095	5trn-m8_A_DT8_5CM9	AAA	AA02	51	0.49	AA02
096	5trn-m9_A_DT8_5CM9	AAA	AA02	49	0.50	AA02
097	5trn-m10_A_5CM9_DG10	A-B	AB01	22	0.30	AB01
098	5trn-m11_A_5CM9_DG10	A-B	AB01	20	0.32	AB01
099	5trn-m12_A_5CM9_DG10	A-B	AB01	18	0.34	AB01
100	5trn-m1_A_5CM9_DG10	A-B	AB01	22	0.31	AB01
101	5trn-m2_A_5CM9_DG10	A-B	AB01	25	0.30	AB01
102	5trn-m3_A_5CM9_DG10	A-B	AB01	28	0.30	AB01
103	5trn-m4_A_5CM9_DG10	A-B	AB01	20	0.31	AB01
104	5trn-m5_A_5CM9_DG10	A-B	AB01	22	0.31	AB01
105	5trn-m6_A_5CM9_DG10	A-B	AB01	21	0.31	AB01
106	5trn-m7_A_5CM9_DG10	A-B	AB01	16	0.33	AB01
107	5trn-m8_A_5CM9_DG10	A-B	AB01	20	0.31	AB01
108	5trn-m9_A_5CM9_DG10	A-B	AB01	25	0.29	AB01
109	5trn-m10_A_DG10_DC11	BBB	BB00	77	0.17	BB00
110	5trn-m11_A_DG10_DC11	BBB	BB00	76	0.17	BB00
111	5trn-m12_A_DG10_DC11	BBB	BB00	74	0.19	BB00
112	5trn-m1_A_DG10_DC11	BBB	BB00	77	0.17	BB00
113	5trn-m2_A_DG10_DC11	BBB	BB00	77	0.16	BB00
114	5trn-m3_A_DG10_DC11	BBB	BB00	78	0.16	BB00
115	5trn-m4_A_DG10_DC11	BBB	BB00	78	0.17	BB00
116	5trn-m5_A_DG10_DC11	BBB	BB00	78	0.17	BB00
117	5trn-m6_A_DG10_DC11	BBB	BB00	77	0.17	BB00
118	5trn-m7_A_DG10_DC11	BBB	BB00	78	0.17	BB00
119	5trn-m8_A_DG10_DC11	BBB	BB00	78	0.17	BB00
120	5trn-m9_A_DG10_DC11	BBB	BB00	78	0.16	BB00
121	5trn-m10_A_DC11_DG12	BBB	BB00	74	0.34	BB00
122	5trn-m11_A_DC11_DG12	BBB	BB00	71	0.34	BB00
123	5trn-m12_A_DC11_DG12	BBB	BB00	67	0.36	BB00
124	5trn-m1_A_DC11_DG12	BBB	BB00	74	0.33	BB00
125	5trn-m2_A_DC11_DG12	BBB	BB00	75	0.33	BB00
126	5trn-m3_A_DC11_DG12	BBB	BB00	75	0.34	BB00
127	5trn-m4_A_DC11_DG12	BBB	BB00	70	0.35	BB00
128	5trn-m5_A_DC11_DG12	BBB	BB00	73	0.34	BB00
129	5trn-m6_A_DC11_DG12	BBB	BB00	75	0.33	BB00
130	5trn-m7_A_DC11_DG12	BBB	BB00	72	0.35	BB00
131	5trn-m8_A_DC11_DG12	BBB	BB00	73	0.33	BB00
132	5trn-m9_A_DC11_DG12	BBB	BB00	74	0.34	BB00
133	5trn-m10_B_DC13_DG14	BBB	BB00	15	0.45	BB00
134	5trn-m11_B_DC13_DG14	BBB	BB01	22	0.34	BB01
135	5trn-m12_B_DC13_DG14	BBB	BB01	33	0.34	BB01
136	5trn-m1_B_DC13_DG14	BBB	BB01	26	0.33	BB01
137	5trn-m2_B_DC13_DG14	BBB	BB00	19	0.43	BB00
138	5trn-m3_B_DC13_DG14	BBB	BB01	25	0.34	BB01
139	5trn-m4_B_DC13_DG14	BBB	BB01	40	0.32	BB01
140	5trn-m5_B_DC13_DG14	BBB	BB01	29	0.34	BB01
141	5trn-m6_B_DC13_DG14	BBB	BB01	26	0.33	BB01
142	5trn-m7_B_DC13_DG14	BBB	BB01	23	0.34	BB01
143	5trn-m8_B_DC13_DG14	BBB	BB01	27	0.33	BB01
144	5trn-m9_B_DC13_DG14	BBB	BB00	23	0.44	BB00
145	5trn-m10_B_DG14_DC15	BBB	BB00	33	0.33	BB00
146	5trn-m11_B_DG14_DC15	BBB	BB00	30	0.35	BB00
147	5trn-m12_B_DG14_DC15	BBB	BB00	23	0.37	BB00
148	5trn-m1_B_DG14_DC15	BBB	BB00	26	0.35	BB00
149	5trn-m2_B_DG14_DC15	BBB	BB00	38	0.33	BB00
150	5trn-m3_B_DG14_DC15	BBB	BB00	26	0.35	BB00
151	5trn-m4_B_DG14_DC15	BBB	BB00	23	0.37	BB00
152	5trn-m5_B_DG14_DC15	BBB	BB00	22	0.36	BB00
153	5trn-m6_B_DG14_DC15	BBB	BB00	25	0.35	BB00
154	5trn-m7_B_DG14_DC15	BBB	BB00	29	0.35	BB00
155	5trn-m8_B_DG14_DC15	BBB	BB00	29	0.34	BB00
156	5trn-m9_B_DG14_DC15	BBB	BB00	43	0.32	BB00
157	5trn-m10_B_DC15_8OG16	BBB	BB00	77	0.29	BB00
158	5trn-m11_B_DC15_8OG16	BBB	BB00	77	0.30	BB00
159	5trn-m12_B_DC15_8OG16	BBB	BB00	76	0.30	BB00
160	5trn-m1_B_DC15_8OG16	BBB	BB00	77	0.30	BB00
161	5trn-m2_B_DC15_8OG16	BBB	BB00	77	0.29	BB00
162	5trn-m3_B_DC15_8OG16	BBB	BB00	77	0.28	BB00
163	5trn-m4_B_DC15_8OG16	BBB	BB00	78	0.29	BB00
164	5trn-m5_B_DC15_8OG16	BBB	BB00	78	0.28	BB00
165	5trn-m6_B_DC15_8OG16	BBB	BB00	77	0.29	BB00
166	5trn-m7_B_DC15_8OG16	BBB	BB00	77	0.30	BB00
167	5trn-m8_B_DC15_8OG16	BBB	BB00	78	0.30	BB00
168	5trn-m9_B_DC15_8OG16	BBB	BB00	77	0.29	BB00
169	5trn-m10_B_8OG16_DA17	BB2	BB07	26	0.56	BB07
170	5trn-m11_B_8OG16_DA17	BB2	BB07	26	0.56	BB07
171	5trn-m12_B_8OG16_DA17	BB2	BB07	25	0.57	BB07
172	5trn-m1_B_8OG16_DA17	BB2	BB07	26	0.56	BB07
173	5trn-m2_B_8OG16_DA17	BB2	BB07	26	0.56	BB07
174	5trn-m3_B_8OG16_DA17	BB2	BB07	26	0.56	BB07
175	5trn-m4_B_8OG16_DA17	BB2	BB07	26	0.55	BB07
176	5trn-m5_B_8OG16_DA17	BB2	BB07	26	0.56	BB07
177	5trn-m6_B_8OG16_DA17	BB2	BB07	26	0.55	BB07
178	5trn-m7_B_8OG16_DA17	BB2	BB07	26	0.55	BB07
179	5trn-m8_B_8OG16_DA17	BB2	BB07	26	0.57	BB07
180	5trn-m9_B_8OG16_DA17	BB2	BB07	26	0.56	BB07
181	5trn-m10_B_DA17_DA18	B12	BB04	53	0.21	BB04
182	5trn-m11_B_DA17_DA18	B12	BB04	53	0.21	BB04
183	5trn-m12_B_DA17_DA18	B12	BB04	53	0.21	BB04
184	5trn-m1_B_DA17_DA18	B12	BB04	53	0.21	BB04
185	5trn-m2_B_DA17_DA18	B12	BB04	53	0.21	BB04
186	5trn-m3_B_DA17_DA18	B12	BB04	53	0.21	BB04
187	5trn-m4_B_DA17_DA18	B12	BB04	53	0.21	BB04
188	5trn-m5_B_DA17_DA18	B12	BB04	53	0.21	BB04
189	5trn-m6_B_DA17_DA18	B12	BB04	53	0.20	BB04
190	5trn-m7_B_DA17_DA18	B12	BB04	53	0.20	BB04
191	5trn-m8_B_DA17_DA18	B12	BB04	53	0.20	BB04
192	5trn-m9_B_DA17_DA18	B12	BB04	53	0.20	BB04
193	5trn-m10_B_DA18_DT19	BBB	BB00	65	0.30	BB00
194	5trn-m11_B_DA18_DT19	BBB	BB00	65	0.28	BB00
195	5trn-m12_B_DA18_DT19	BBB	BB00	65	0.29	BB00
196	5trn-m1_B_DA18_DT19	BBB	BB00	66	0.28	BB00
197	5trn-m2_B_DA18_DT19	BBB	BB00	65	0.31	BB00
198	5trn-m3_B_DA18_DT19	BBB	BB00	65	0.30	BB00
199	5trn-m4_B_DA18_DT19	BBB	BB00	66	0.28	BB00
200	5trn-m5_B_DA18_DT19	BBB	BB00	66	0.27	BB00
201	5trn-m6_B_DA18_DT19	BBB	BB00	66	0.28	BB00
202	5trn-m7_B_DA18_DT19	BBB	BB00	66	0.28	BB00
203	5trn-m8_B_DA18_DT19	BBB	BB00	64	0.29	BB00
204	5trn-m9_B_DA18_DT19	BBB	BB00	66	0.28	BB00
205	5trn-m10_B_DT19_DT20	B-A	BA05	74	0.14	BA05
206	5trn-m11_B_DT19_DT20	B-A	BA05	64	0.16	BA05
207	5trn-m12_B_DT19_DT20	B-A	BA05	64	0.15	BA05
208	5trn-m1_B_DT19_DT20	B-A	BA05	72	0.15	BA05
209	5trn-m2_B_DT19_DT20	B-A	BA05	71	0.14	BA05
210	5trn-m3_B_DT19_DT20	B-A	BA05	67	0.14	BA05
211	5trn-m4_B_DT19_DT20	B-A	BA05	69	0.14	BA05
212	5trn-m5_B_DT19_DT20	B-A	BA05	68	0.15	BA05
213	5trn-m6_B_DT19_DT20	B-A	BA05	71	0.14	BA05
214	5trn-m7_B_DT19_DT20	B-A	BA05	71	0.15	BA05
215	5trn-m8_B_DT19_DT20	B-A	BA05	64	0.14	BA05
216	5trn-m9_B_DT19_DT20	B-A	BA05	63	0.16	BA05
217	5trn-m10_B_DT20_5CM21	AAA	AA02	49	0.50	AA02
218	5trn-m11_B_DT20_5CM21	B-A	BA05	57	0.25	BA05
219	5trn-m12_B_DT20_5CM21	AAA	AA02	47	0.50	AA02
220	5trn-m1_B_DT20_5CM21	AAA	AA02	46	0.51	AA02
221	5trn-m2_B_DT20_5CM21	AAA	AA02	51	0.50	AA02
222	5trn-m3_B_DT20_5CM21	B-A	BA05	57	0.24	BA05
223	5trn-m4_B_DT20_5CM21	AAA	AA02	45	0.51	AA02
224	5trn-m5_B_DT20_5CM21	B-A	BA05	57	0.26	BA05
225	5trn-m6_B_DT20_5CM21	AAA	AA02	49	0.50	AA02
226	5trn-m7_B_DT20_5CM21	AAA	AA02	47	0.50	AA02
227	5trn-m8_B_DT20_5CM21	AAA	AA02	47	0.51	AA02
228	5trn-m9_B_DT20_5CM21	AAA	AA02	48	0.50	AA02
229	5trn-m10_B_5CM21_DG22	A-B	AB01	22	0.32	AB01
230	5trn-m11_B_5CM21_DG22	A-B	AB01	21	0.31	AB01
231	5trn-m12_B_5CM21_DG22	A-B	AB01	25	0.30	AB01
232	5trn-m1_B_5CM21_DG22	A-B	AB01	24	0.31	AB01
233	5trn-m2_B_5CM21_DG22	A-B	AB01	24	0.31	AB01
234	5trn-m3_B_5CM21_DG22	A-B	AB01	21	0.32	AB01
235	5trn-m4_B_5CM21_DG22	A-B	AB01	27	0.30	AB01
236	5trn-m5_B_5CM21_DG22	A-B	AB01	26	0.30	AB01
237	5trn-m6_B_5CM21_DG22	A-B	AB01	21	0.31	AB01
238	5trn-m7_B_5CM21_DG22	A-B	AB01	18	0.32	AB01
239	5trn-m8_B_5CM21_DG22	A-B	AB01	26	0.31	AB01
240	5trn-m9_B_5CM21_DG22	A-B	AB01	22	0.31	AB01
241	5trn-m10_B_DG22_DC23	BBB	BB00	77	0.17	BB00
242	5trn-m11_B_DG22_DC23	BBB	BB00	77	0.17	BB00
243	5trn-m12_B_DG22_DC23	BBB	BB00	77	0.16	BB00
244	5trn-m1_B_DG22_DC23	BBB	BB00	77	0.17	BB00
245	5trn-m2_B_DG22_DC23	BBB	BB00	77	0.17	BB00
246	5trn-m3_B_DG22_DC23	BBB	BB00	79	0.16	BB00
247	5trn-m4_B_DG22_DC23	BBB	BB00	77	0.16	BB00
248	5trn-m5_B_DG22_DC23	BBB	BB00	76	0.17	BB00
249	5trn-m6_B_DG22_DC23	BBB	BB00	78	0.17	BB00
250	5trn-m7_B_DG22_DC23	BBB	BB00	78	0.17	BB00
251	5trn-m8_B_DG22_DC23	BBB	BB00	78	0.16	BB00
252	5trn-m9_B_DG22_DC23	BBB	BB00	78	0.17	BB00
253	5trn-m10_B_DC23_DG24	BBB	BB00	75	0.33	BB00
254	5trn-m11_B_DC23_DG24	BBB	BB00	73	0.34	BB00
255	5trn-m12_B_DC23_DG24	BBB	BB00	73	0.34	BB00
256	5trn-m1_B_DC23_DG24	BBB	BB00	74	0.34	BB00
257	5trn-m2_B_DC23_DG24	BBB	BB00	75	0.33	BB00
258	5trn-m3_B_DC23_DG24	BBB	BB00	76	0.32	BB00
259	5trn-m4_B_DC23_DG24	BBB	BB00	75	0.33	BB00
260	5trn-m5_B_DC23_DG24	BBB	BB00	71	0.34	BB00
261	5trn-m6_B_DC23_DG24	BBB	BB00	74	0.34	BB00
262	5trn-m7_B_DC23_DG24	BBB	BB00	74	0.33	BB00
263	5trn-m8_B_DC23_DG24	BBB	BB00	73	0.33	BB00
264	5trn-m9_B_DC23_DG24	BBB	BB00	71	0.36	BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

Results of the assignment of 264 detected steps in 12 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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