DNATCO v4.1: results

Structure of the human SRP S domain with SRP72 RNA-binding domain

Results of the assignment of 288 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	5m73_A_GTP105_G106	AAA	AA04	73	0.15	AA04
002	5m73_A_G106_G107	AAA	AA00	80	0.18	AA00
003	5m73_A_G107_U108	AAA	AA00	72	0.27	AA00
004	5m73_A_U108_G109	AAA	AA04	60	0.38	AA04
005	5m73_A_G109_U110	AAA	AA08	84	0.15	AA08
006	5m73_A_U110_C111	NAN	NANT	0	0.87	AA08
007	5m73_A_C111_C112	A-B	AB05	67	0.29	AB05
008	5m73_A_C112_G113	NAN	NANT	0	0.69	OP14
009	5m73_A_G113_C114	NAN	NANT	0	0.67	OP17
010	5m73_A_C114_A115	AAA	AA08	56	0.24	AA08
011	5m73_A_A115_C116	AAA	AA00	88	0.10	AA00
012	5m73_A_C116_U117	AAA	AA00	87	0.22	AA00
013	5m73_A_U117_A118	AAA	AA00	90	0.15	AA00
014	5m73_A_A118_A119	AAA	AA00	50	0.22	AA00
015	5m73_A_A119_G120	NAN	NANT	0	0.27	AA10
016	5m73_A_G120_U121	AAA	AA00	27	0.35	AA00
017	5m73_A_U121_U122	AAA	AA00	87	0.15	AA00
018	5m73_A_U122_C123	AAA	AA00	77	0.31	AA00
019	5m73_A_C123_G124	AAw	AA01	37	0.49	AA01
020	5m73_A_G124_G125	NAN	NANT	0	0.53	AA12
021	5m73_A_G125_C126	AAA	AA00	82	0.19	AA00
022	5m73_A_C126_A127	AAA	AA00	68	0.26	AA00
023	5m73_A_A127_U128	NAN	NANT	0	0.49	AB04
024	5m73_A_U128_C129	NAN	NANT	0	0.61	OP06
025	5m73_A_C129_A130	AAw	AA10	80	0.16	AA10
026	5m73_A_A130_A131	AAA	AA08	71	0.32	AA08
027	5m73_A_A131_U132	AAw	AA10	26	0.30	AA10
028	5m73_A_U132_A133	AAA	AA08	13	0.49	AA08
029	5m73_A_A133_U134	AAA	AA00	73	0.30	AA00
030	5m73_A_U134_G135	AAA	AA00	77	0.16	AA00
031	5m73_A_G135_G136	AAA	AA00	53	0.18	AA00
032	5m73_A_G136_U137	AAA	AA00	74	0.23	AA00
033	5m73_A_U137_G138	AAA	AA00	48	0.19	AA00
034	5m73_A_G138_A139	AAA	AA00	78	0.16	AA00
035	5m73_A_A139_C140	AAA	AA08	78	0.18	AA08
036	5m73_A_C140_C141	AAA	AA00	74	0.34	AA00
037	5m73_A_C141_U142	AAA	AA00	77	0.31	AA00
038	5m73_A_U142_C143	AAw	AA01	47	0.29	AA01
039	5m73_A_C143_C144	NAN	NANT	0	0.50	AA10
040	5m73_A_C144_C145	NAN	NANT	0	0.56	AA10
041	5m73_A_C145_G146	AAA	AA08	59	0.26	AA08
042	5m73_A_G146_G147	AAA	AA00	49	0.15	AA00
043	5m73_A_G147_G148	OPN	OP04	65	0.31	OP04
044	5m73_A_G148_A149	NAN	NANT	0	0.44	AA06
045	5m73_A_A149_G150	AAA	AA00	50	0.42	AA00
046	5m73_A_G150_C151	NAN	NANT	0	1.14	AA08
047	5m73_A_C151_G152	AAA	AA00	43	0.18	AA00
048	5m73_A_G152_G153	AAA	AA00	72	0.19	AA00
049	5m73_A_G153_G154	AAA	AA04	86	0.21	AA04
050	5m73_A_G154_G155	AAA	AA00	64	0.29	AA00
051	5m73_A_G155_G156	AAw	AA06	76	0.16	AA06
052	5m73_A_G156_A157	AAA	AA08	32	0.33	AA08
053	5m73_A_A157_C158	AAA	AA08	85	0.25	AA08
054	5m73_A_C158_C159	AAA	AA08	64	0.37	AA08
055	5m73_A_C159_A160	AAA	AA08	76	0.17	AA08
056	5m73_A_A160_C161	AAA	AA00	31	0.24	AA00
057	5m73_A_C161_C162	AAA	AA00	76	0.21	AA00
058	5m73_A_C162_A163	AAA	AA08	62	0.30	AA08
059	5m73_A_A163_G164	A-B	AB05	23	0.68	AB05
060	5m73_A_G164_G165	NAN	NANT	0	0.64	OP26
061	5m73_A_G165_U166	AAA	AA08	66	0.27	AA08
062	5m73_A_U166_U167	AAw	AA10	53	0.45	AA10
063	5m73_A_U167_G168	A-B	AB04	39	0.34	AB04
064	5m73_A_G168_C169	NAN	NANT	0	0.70	OP14
065	5m73_A_C169_C170	NAN	NANT	0	1.27	OP13
066	5m73_A_C170_U171	NAN	NANT	0	0.53	AA10
067	5m73_A_U171_A172	NAN	NANT	0	0.36	OP04
068	5m73_A_A172_A173	AAw	AA06	46	0.49	AA06
069	5m73_A_A173_G174	NAN	NANT	0	0.53	AA09
070	5m73_A_G174_G175	NAN	NANT	0	0.78	OP28
071	5m73_A_G175_A176	NAN	NANT	0	1.64	IC04
072	5m73_A_A176_G177	NAN	NANT	0	1.75	OP17
073	5m73_A_G177_G178	AAw	AA11	17	0.58	AA11
074	5m73_A_G178_G179	AAA	AA00	30	0.27	AA00
075	5m73_A_G179_G180	AAA	AA00	58	0.23	AA00
076	5m73_A_G180_U181	AAA	AA08	43	0.57	AA08
077	5m73_A_U181_G182	AAA	AA08	51	0.37	AA08
078	5m73_A_G182_A183	NAN	NANT	0	0.68	IC02
079	5m73_A_A183_A184	NAN	NANT	0	1.00	BB04
080	5m73_A_A184_C185	NAN	NANT	0	0.76	BB00
081	5m73_A_C185_C186	NAN	NANT	0	1.90	ZZ1S
082	5m73_A_C186_G187	NAN	NANT	0	0.57	OP31
083	5m73_A_G187_G188	AAA	AA00	62	0.24	AA00
084	5m73_A_G188_C189	AAA	AA00	69	0.20	AA00
085	5m73_A_C189_C190	AAA	AA00	25	0.39	AA00
086	5m73_A_C190_C191	NAN	NANT	0	0.53	AA10
087	5m73_A_C191_A192	AAu	AA13	33	0.30	AA13
088	5m73_A_A192_G193	AAA	AA08	22	0.61	AA08
089	5m73_A_G193_G194	AAA	AA08	30	0.59	AA08
090	5m73_A_G194_U195	AAA	AA00	58	0.22	AA00
091	5m73_A_U195_C196	AAA	AA08	88	0.15	AA08
092	5m73_A_C196_G197	AAA	AA00	72	0.22	AA00
093	5m73_A_G197_G198	AAA	AA00	58	0.30	AA00
094	5m73_A_G198_A199	OPN	OP03	28	0.18	OP03
095	5m73_A_A199_A200	AAA	AA04	56	0.52	AA04
096	5m73_A_A200_A201	AAA	AA00	49	0.29	AA00
097	5m73_A_A201_C202	NAN	NANT	0	0.95	AA04
098	5m73_A_C202_G203	AAA	AA00	90	0.18	AA00
099	5m73_A_G203_G204	AAA	AA00	79	0.22	AA00
100	5m73_A_G204_A205	AAA	AA00	86	0.17	AA00
101	5m73_A_A205_G206	AAw	AA01	33	0.55	AA01
102	5m73_A_G206_C207	AAu	AA12	77	0.32	AA12
103	5m73_A_C207_A208	AAA	AA00	58	0.40	AA00
104	5m73_A_A208_G209	AAA	AA00	18	0.54	AA00
105	5m73_A_G209_G210	AAA	AA08	83	0.27	AA08
106	5m73_A_G210_U211	AAA	AA00	65	0.43	AA00
107	5m73_A_U211_C212	AAA	AA08	59	0.35	AA08
108	5m73_A_C212_A213	NAN	NANT	0	0.59	IC03
109	5m73_A_A213_A214	NAN	NANT	0	0.70	OP08
110	5m73_A_A214_A215	NAN	NANT	0	0.79	AA01
111	5m73_A_A215_A216	A-B	AB04	50	0.40	AB04
112	5m73_A_A216_C217	NAN	NANT	0	0.45	BA10
113	5m73_A_C217_U218	AAA	AA08	65	0.43	AA08
114	5m73_A_U218_C219	AAA	AA08	72	0.31	AA08
115	5m73_A_C219_C220	AAw	AA10	20	0.30	AA10
116	5m73_A_C220_C221	AAA	AA08	56	0.25	AA08
117	5m73_A_C221_G222	AAA	AA00	56	0.40	AA00
118	5m73_A_G222_U223	AAA	AA08	84	0.12	AA08
119	5m73_A_U223_G224	AAA	AA08	79	0.18	AA08
120	5m73_A_G224_C225	AAA	AA08	69	0.18	AA08
121	5m73_A_C225_U226	NAN	NANT	0	0.45	AA10
122	5m73_A_U226_G227	AAA	AA08	68	0.31	AA08
123	5m73_A_G227_A228	NAN	NANT	0	0.36	AA10
124	5m73_A_A228_U229	AAA	AA04	77	0.40	AA04
125	5m73_A_U229_C230	NAN	NANT	0	0.56	AB03
126	5m73_A_C230_A231	NAN	NANT	0	0.97	OP05
127	5m73_A_A231_G232	NAN	NANT	0	1.38	OP06
128	5m73_A_G232_U233	NAN	NANT	0	0.67	BA10
129	5m73_A_U233_A234	AAA	AA04	73	0.39	AA04
130	5m73_A_A234_G235	AAA	AA00	84	0.19	AA00
131	5m73_A_G235_U236	AAA	AA00	71	0.19	AA00
132	5m73_A_U236_G237	AAw	AA10	81	0.17	AA10
133	5m73_A_G237_G238	AAA	AA08	43	0.22	AA08
134	5m73_A_G238_G239	AAA	AA08	74	0.24	AA08
135	5m73_A_G239_A240	AAA	AA00	50	0.46	AA00
136	5m73_A_A240_U241	A-B	AB05	55	0.28	AB05
137	5m73_A_U241_C242	NAN	NANT	0	0.74	OP20
138	5m73_A_C242_G243	NAN	NANT	0	0.79	OP12
139	5m73_A_G243_C244	NAN	NANT	0	0.56	AA03
140	5m73_A_C244_G245	AAw	AA01	54	0.38	AA01
141	5m73_A_G245_C246	AAA	AA08	90	0.16	AA08
142	5m73_A_C246_C247	AAA	AA00	95	0.19	AA00
143	5m73_A_C247_U248	AAw	AA01	10	0.28	AA01
144	5m73_A_U248_A249	NAN	NANT	0	0.78	IC04
145	5m73_E_GTP105_G106	AAA	AA04	18	0.56	AA04
146	5m73_E_G106_G107	AAA	AA00	73	0.19	AA00
147	5m73_E_G107_U108	AAA	AA00	73	0.27	AA00
148	5m73_E_U108_G109	AAA	AA04	60	0.35	AA04
149	5m73_E_G109_U110	AAA	AA08	84	0.19	AA08
150	5m73_E_U110_C111	NAN	NANT	0	0.88	AA08
151	5m73_E_C111_C112	A-B	AB05	67	0.33	AB05
152	5m73_E_C112_G113	NAN	NANT	0	1.95	OP18
153	5m73_E_G113_C114	NAN	NANT	0	0.62	OP17
154	5m73_E_C114_A115	AAA	AA08	35	0.33	AA08
155	5m73_E_A115_C116	AAA	AA00	88	0.14	AA00
156	5m73_E_C116_U117	AAA	AA00	85	0.19	AA00
157	5m73_E_U117_A118	NAN	NANT	0	0.53	AB2S
158	5m73_E_A118_A119	SYN	AAS1	58	0.36	AAS1
159	5m73_E_A119_G120	NAN	NANT	0	0.32	AA10
160	5m73_E_G120_U121	AAA	AA00	34	0.36	AA00
161	5m73_E_U121_U122	AAA	AA00	82	0.27	AA00
162	5m73_E_U122_C123	AAA	AA00	74	0.35	AA00
163	5m73_E_C123_G124	AAw	AA01	32	0.55	AA01
164	5m73_E_G124_G125	AAA	AA00	12	0.40	AA00
165	5m73_E_G125_C126	AAA	AA00	85	0.16	AA00
166	5m73_E_C126_A127	AAA	AA00	80	0.20	AA00
167	5m73_E_A127_U128	NAN	NANT	0	0.44	AB04
168	5m73_E_U128_C129	NAN	NANT	0	1.20	OP16
169	5m73_E_C129_A130	AAw	AA10	71	0.22	AA10
170	5m73_E_A130_A131	AAA	AA08	74	0.30	AA08
171	5m73_E_A131_U132	AAw	AA10	29	0.39	AA10
172	5m73_E_U132_A133	NAN	NANT	0	0.72	AA07
173	5m73_E_A133_U134	AAA	AA00	73	0.31	AA00
174	5m73_E_U134_G135	AAA	AA00	87	0.14	AA00
175	5m73_E_G135_G136	AAA	AA00	63	0.12	AA00
176	5m73_E_G136_U137	AAA	AA00	78	0.21	AA00
177	5m73_E_U137_G138	AAA	AA00	79	0.20	AA00
178	5m73_E_G138_A139	AAA	AA00	74	0.23	AA00
179	5m73_E_A139_C140	AAA	AA08	77	0.23	AA08
180	5m73_E_C140_C141	AAA	AA00	79	0.21	AA00
181	5m73_E_C141_U142	AAA	AA00	82	0.31	AA00
182	5m73_E_U142_C143	AAw	AA01	48	0.27	AA01
183	5m73_E_C143_C144	NAN	NANT	0	0.49	AA10
184	5m73_E_C144_C145	NAN	NANT	0	0.60	AA10
185	5m73_E_C145_G146	AAA	AA08	38	0.29	AA08
186	5m73_E_G146_G147	AAA	AA00	59	0.14	AA00
187	5m73_E_G147_G148	OPN	OP04	53	0.37	OP04
188	5m73_E_G148_A149	NAN	NANT	0	0.50	AA06
189	5m73_E_A149_G150	AAA	AA00	41	0.46	AA00
190	5m73_E_G150_C151	NAN	NANT	0	1.18	AA08
191	5m73_E_C151_G152	AAA	AA04	61	0.36	AA04
192	5m73_E_G152_G153	AAA	AA00	79	0.20	AA00
193	5m73_E_G153_G154	AAA	AA04	82	0.26	AA04
194	5m73_E_G154_G155	AAA	AA00	56	0.31	AA00
195	5m73_E_G155_G156	AAw	AA06	76	0.21	AA06
196	5m73_E_G156_A157	AAA	AA08	49	0.32	AA08
197	5m73_E_A157_C158	AAA	AA08	93	0.17	AA08
198	5m73_E_C158_C159	AAA	AA08	77	0.30	AA08
199	5m73_E_C159_A160	AAA	AA08	74	0.24	AA08
200	5m73_E_A160_C161	AAA	AA00	32	0.24	AA00
201	5m73_E_C161_C162	AAA	AA00	83	0.15	AA00
202	5m73_E_C162_A163	AAA	AA08	67	0.25	AA08
203	5m73_E_A163_G164	A-B	AB05	16	0.71	AB05
204	5m73_E_G164_G165	NAN	NANT	0	0.63	OP26
205	5m73_E_G165_U166	AAA	AA08	65	0.21	AA08
206	5m73_E_U166_U167	AAw	AA10	53	0.40	AA10
207	5m73_E_U167_G168	A-B	AB05	23	0.38	AB05
208	5m73_E_G168_C169	NAN	NANT	0	2.06	OP28
209	5m73_E_C169_C170	NAN	NANT	0	1.13	OP13
210	5m73_E_C170_U171	NAN	NANT	0	0.41	AA10
211	5m73_E_U171_A172	NAN	NANT	0	0.34	OP04
212	5m73_E_A172_A173	AAw	AA06	50	0.42	AA06
213	5m73_E_A173_G174	NAN	NANT	0	0.56	AA09
214	5m73_E_G174_G175	NAN	NANT	0	0.84	OP28
215	5m73_E_G175_A176	NAN	NANT	0	1.61	IC04
216	5m73_E_A176_G177	NAN	NANT	0	1.75	OP17
217	5m73_E_G177_G178	AAA	AA08	35	0.34	AA08
218	5m73_E_G178_G179	AAA	AA00	33	0.29	AA00
219	5m73_E_G179_G180	AAA	AA00	74	0.17	AA00
220	5m73_E_G180_U181	AAA	AA08	53	0.57	AA08
221	5m73_E_U181_G182	AAA	AA08	65	0.35	AA08
222	5m73_E_G182_A183	NAN	NANT	0	0.67	OP08
223	5m73_E_A183_A184	NAN	NANT	0	0.71	AB04
224	5m73_E_A184_C185	NAN	NANT	0	0.51	IC06
225	5m73_E_C185_C186	NAN	NANT	0	1.06	OP21
226	5m73_E_C186_G187	NAN	NANT	0	0.50	OP31
227	5m73_E_G187_G188	AAA	AA00	76	0.15	AA00
228	5m73_E_G188_C189	AAA	AA00	73	0.30	AA00
229	5m73_E_C189_C190	AAA	AA00	30	0.35	AA00
230	5m73_E_C190_C191	NAN	NANT	0	0.52	AA10
231	5m73_E_C191_A192	AAu	AA13	61	0.27	AA13
232	5m73_E_A192_G193	AAA	AA08	31	0.45	AA08
233	5m73_E_G193_G194	AAA	AA08	47	0.55	AA08
234	5m73_E_G194_U195	AAA	AA00	45	0.28	AA00
235	5m73_E_U195_C196	AAA	AA08	86	0.17	AA08
236	5m73_E_C196_G197	AAA	AA00	65	0.25	AA00
237	5m73_E_G197_G198	AAA	AA00	53	0.30	AA00
238	5m73_E_G198_A199	OPN	OP03	29	0.18	OP03
239	5m73_E_A199_A200	AAA	AA04	51	0.53	AA04
240	5m73_E_A200_A201	AAA	AA08	72	0.28	AA08
241	5m73_E_A201_C202	NAN	NANT	0	0.90	AA04
242	5m73_E_C202_G203	AAA	AA00	90	0.18	AA00
243	5m73_E_G203_G204	AAA	AA00	78	0.23	AA00
244	5m73_E_G204_A205	AAA	AA00	89	0.18	AA00
245	5m73_E_A205_G206	AAw	AA05	27	0.30	AA05
246	5m73_E_G206_C207	AAu	AA13	90	0.14	AA13
247	5m73_E_C207_A208	AAA	AA00	53	0.36	AA00
248	5m73_E_A208_G209	AAA	AA00	22	0.43	AA00
249	5m73_E_G209_G210	AAA	AA08	86	0.26	AA08
250	5m73_E_G210_U211	AAA	AA00	55	0.34	AA00
251	5m73_E_U211_C212	AAA	AA00	39	0.33	AA00
252	5m73_E_C212_A213	AAA	AA03	37	0.55	AA03
253	5m73_E_A213_A214	NAN	NANT	0	0.54	OP08
254	5m73_E_A214_A215	NAN	NANT	0	0.89	AA10
255	5m73_E_A215_A216	A-B	AB05	14	0.73	AB05
256	5m73_E_A216_C217	NAN	NANT	0	0.52	BA10
257	5m73_E_C217_U218	AAA	AA08	74	0.41	AA08
258	5m73_E_U218_C219	AAA	AA08	71	0.33	AA08
259	5m73_E_C219_C220	AAw	AA10	23	0.25	AA10
260	5m73_E_C220_C221	AAA	AA08	35	0.33	AA08
261	5m73_E_C221_G222	AAA	AA00	46	0.47	AA00
262	5m73_E_G222_U223	AAA	AA08	83	0.22	AA08
263	5m73_E_U223_G224	AAA	AA08	79	0.27	AA08
264	5m73_E_G224_C225	AAA	AA08	71	0.23	AA08
265	5m73_E_C225_U226	NAN	NANT	0	0.52	AA10
266	5m73_E_U226_G227	AAA	AA08	66	0.32	AA08
267	5m73_E_G227_A228	NAN	NANT	0	0.34	AA10
268	5m73_E_A228_U229	AAA	AA04	74	0.38	AA04
269	5m73_E_U229_C230	NAN	NANT	0	0.52	AA11
270	5m73_E_C230_A231	NAN	NANT	0	0.81	OP17
271	5m73_E_A231_G232	NAN	NANT	0	1.82	OP29
272	5m73_E_G232_U233	NAN	NANT	0	0.58	BBS1
273	5m73_E_U233_A234	NAN	NANT	0	0.76	AB02
274	5m73_E_A234_G235	NAN	NANT	0	0.56	AB02
275	5m73_E_G235_U236	AAA	AA00	35	0.36	AA00
276	5m73_E_U236_G237	AAw	AA10	74	0.20	AA10
277	5m73_E_G237_G238	AAA	AA08	49	0.17	AA08
278	5m73_E_G238_G239	AAA	AA08	78	0.21	AA08
279	5m73_E_G239_A240	AAA	AA00	48	0.43	AA00
280	5m73_E_A240_U241	A-B	AB05	54	0.29	AB05
281	5m73_E_U241_C242	NAN	NANT	0	0.91	OP20
282	5m73_E_C242_G243	NAN	NANT	0	0.97	OP12
283	5m73_E_G243_C244	NAN	NANT	0	0.58	AA03
284	5m73_E_C244_G245	AAw	AA01	46	0.43	AA01
285	5m73_E_G245_C246	AAA	AA08	89	0.23	AA08
286	5m73_E_C246_C247	AAA	AA00	87	0.27	AA00
287	5m73_E_C247_U248	NAN	NANT	0	0.62	BB2S
288	5m73_E_U248_A249	NAN	NANT	0	1.22	ZZS1

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

Results of the assignment of 288 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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