DNATCO v4.1: results

Crystal structure of the complex between human FMRP RGG motif and G-quadruplex RNA, iridium hexammine bound form.

Results of the assignment of 68 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	5de8_A_G1_C2	AAA	AA00	87	0.20	AA00
02	5de8_A_C2_U3	AAA	AA00	88	0.20	AA00
03	5de8_A_U3_G4	AAA	AA00	81	0.20	AA00
04	5de8_A_G4_C5	AAA	AA00	44	0.29	AA00
05	5de8_A_C5_G6	NAN	NANT	0	0.82	IC03
06	5de8_A_G6_G7	NAN	NANT	0	0.86	ZZ1S
07	5de8_A_G7_U8	NAN	NANT	0	0.64	AA00
08	5de8_A_U8_G9	A-B	AB05	88	0.17	AB05
09	5de8_A_G9_U10	NAN	NANT	0	1.63	OP17
10	5de8_A_U10_G11	NAN	NANT	0	1.98	OP13
11	5de8_A_G11_G12	A-B	AB05	68	0.32	AB05
12	5de8_A_G12_A13	NAN	NANT	0	0.94	OP18
13	5de8_A_A13_A14	NAN	NANT	0	2.33	OP1S
14	5de8_A_A14_G15	NAN	NANT	0	0.76	OPS1
15	5de8_A_G15_G16	A-B	AB05	67	0.20	AB05
16	5de8_A_G16_A17	NAN	NANT	0	0.44	IC06
17	5de8_A_A17_G18	NAN	NANT	0	1.28	OP23
18	5de8_A_G18_U19	NAN	NANT	0	0.88	OP14
19	5de8_A_U19_G20	NAN	NANT	0	0.52	OP21
20	5de8_A_G20_G21	A-B	AB05	59	0.25	AB05
21	5de8_A_G21_C22	NAN	NANT	0	1.71	OP17
22	5de8_A_C22_U23	NAN	NANT	0	1.38	OP14
23	5de8_A_U23_G24	AAu	AA12	67	0.24	AA12
24	5de8_A_G24_G25	AAA	AA08	85	0.25	AA08
25	5de8_A_G25_G26	ZZZ	ZZ01	76	0.22	ZZ01
26	5de8_A_G26_U27	NAN	NANT	0	1.19	OP16
27	5de8_A_U27_U28	NAN	NANT	0	2.00	OP20
28	5de8_A_U28_G29	OPN	OP15	47	0.45	OP15
29	5de8_A_G29_C30	AAA	AA08	30	0.29	AA08
30	5de8_A_C30_G31	AAA	AA00	71	0.18	AA00
31	5de8_A_G31_C32	AAA	AA00	82	0.13	AA00
32	5de8_A_C32_A33	AAA	AA00	83	0.17	AA00
33	5de8_A_A33_G34	AAA	AA00	83	0.17	AA00
34	5de8_A_G34_C35	AAA	AA04	81	0.30	AA04
35	5de8_C_G1_C2	AAA	AA00	82	0.26	AA00
36	5de8_C_C2_U3	AAA	AA00	81	0.30	AA00
37	5de8_C_U3_G4	AAA	AA00	72	0.26	AA00
38	5de8_C_G4_C5	AAA	AA00	49	0.29	AA00
39	5de8_C_C5_G6	NAN	NANT	0	0.83	IC03
40	5de8_C_G6_G7	NAN	NANT	0	1.54	BA16
41	5de8_C_G7_U8	NAN	NANT	0	0.67	AA00
42	5de8_C_U8_G9	A-B	AB05	89	0.17	AB05
43	5de8_C_G9_U10	NAN	NANT	0	0.78	OP14
44	5de8_C_U10_G11	NAN	NANT	0	0.44	OP21
45	5de8_C_G11_G12	A-B	AB05	76	0.25	AB05
46	5de8_C_G12_A13	NAN	NANT	0	2.09	OP06
47	5de8_C_A13_A14	NAN	NANT	0	1.05	OP30
48	5de8_C_A14_G15	NAN	NANT	0	0.78	AAS1
49	5de8_C_G15_G16	NAN	NANT	0	0.51	AB02
50	5de8_C_G16_A17	NAN	NANT	0	0.42	IC06
51	5de8_C_A17_G18	NAN	NANT	0	1.24	OP23
52	5de8_C_G18_U19	NAN	NANT	0	1.29	OP18
53	5de8_C_U19_G20	NAN	NANT	0	0.43	OP21
54	5de8_C_G20_G21	BBw	BB16	70	0.54	BB16
55	5de8_C_G21_C22	NAN	NANT	0	1.29	OP19
56	5de8_C_C22_U23	NAN	NANT	0	0.55	OP01
57	5de8_C_U23_G24	NAN	NANT	0	2.52	OP16
58	5de8_C_G24_G25	AAw	AA11	47	0.32	AA11
59	5de8_C_G25_G26	ZZZ	ZZ01	31	0.40	ZZ01
60	5de8_C_G26_U27	NAN	NANT	0	1.28	OP17
61	5de8_C_U27_U28	NAN	NANT	0	0.76	OP06
62	5de8_C_U28_G29	OPN	OP15	44	0.46	OP15
63	5de8_C_G29_C30	NAN	NANT	0	0.94	AA11
64	5de8_C_C30_G31	AAA	AA08	81	0.29	AA08
65	5de8_C_G31_C32	AAA	AA00	83	0.13	AA00
66	5de8_C_C32_A33	AAA	AA00	82	0.15	AA00
67	5de8_C_A33_G34	AAA	AA00	72	0.22	AA00
68	5de8_C_G34_C35	AAA	AA04	50	0.41	AA04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 68 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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