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Conformers: ABBIImiBZICOPNSYNN
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Human HSF2 DNA Binding Domain in complex with 3-site HSE DNA at 2.1 Angstroms Resolution

Results of the assignment of 64 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
015d8l_A_DG1_DT2BBBBB00710.25 BB00
025d8l_A_DT2_DG3BBBBB00770.29 BB00
035d8l_A_DG3_DA4BBBBB01210.32 BB01
045d8l_A_DA4_DA5A-BAB02500.27 AB02
055d8l_A_DA5_DT6BBBBB01700.16 BB01
065d8l_A_DT6_DA7BBBBB00710.18 BB00
075d8l_A_DA7_DT8BBBBB01650.17 BB01
085d8l_A_DT8_DT9BBBBB01820.19 BB01
095d8l_A_DT9_DC10BBBBB01850.18 BB01
105d8l_A_DC10_DT11BBBBB01840.16 BB01
115d8l_A_DT11_DA12BBBBB00800.21 BB00
125d8l_A_DA12_DG13BBBBB00680.36 BB00
135d8l_A_DG13_DA14BBBBB00600.15 BB00
145d8l_A_DA14_DA15BBBBB00810.27 BB00
155d8l_A_DA15_DC16B-ABA05890.25 BA05
165d8l_A_DC16_DC17NANNANT00.62 AA02
175d8l_C_DG1_DG2BBBBB00320.31 BB00
185d8l_C_DG2_DT3BBBBB00890.21 BB00
195d8l_C_DT3_DT4BBBBB01880.15 BB01
205d8l_C_DT4_DC5BBBBB00590.20 BB00
215d8l_C_DC5_DT6BBBBB01940.14 BB01
225d8l_C_DT6_DA7BBBBB00760.22 BB00
235d8l_C_DA7_DG8BBBBB00770.31 BB00
245d8l_C_DG8_DA9B-ABA05910.21 BA05
255d8l_C_DA9_DA10BBBBB00230.28 BB00
265d8l_C_DA10_DT11NANNANT00.37 BB05
275d8l_C_DT11_DA12NANNANT00.54 BB11
285d8l_C_DA12_DT13B-ABA05790.25 BA05
295d8l_C_DT13_DT14A-BAB01190.45 AB01
305d8l_C_DT14_DC15BBBBB00900.14 BB00
315d8l_C_DC15_DA16BBBBB00870.26 BB00
325d8l_C_DA16_DC17B-ABA01760.19 BA01
335d8l_E_DG1_DG2BBBBB00590.22 BB00
345d8l_E_DG2_DT3BBBBB01720.18 BB01
355d8l_E_DT3_DT4BBBBB01940.14 BB01
365d8l_E_DT4_DC5BBBBB01890.17 BB01
375d8l_E_DC5_DT6BBBBB01910.14 BB01
385d8l_E_DT6_DA7BBBBB00770.20 BB00
395d8l_E_DA7_DG8B12BB04830.21 BB04
405d8l_E_DG8_DA9BBBBB00920.12 BB00
415d8l_E_DA9_DA10BBBBB00900.21 BB00
425d8l_E_DA10_DT11BBBBB00920.17 BB00
435d8l_E_DT11_DA12BBwBB02600.24 BB02
445d8l_E_DA12_DT13B-ABA05690.36 BA05
455d8l_E_DT13_DT14BBBBB01660.24 BB01
465d8l_E_DT14_DC15BBBBB01840.10 BB01
475d8l_E_DC15_DA16BBBBB00600.35 BB00
485d8l_E_DA16_DC17BBwBB02180.33 BB02
495d8l_G_DG1_DT2BBwBB02610.22 BB02
505d8l_G_DT2_DG3miBBB10680.42 BB10
515d8l_G_DG3_DA4BBBBB00570.38 BB00
525d8l_G_DA4_DA5BBBBB00950.09 BB00
535d8l_G_DA5_DT6BBBBB01560.23 BB01
545d8l_G_DT6_DA7BBBBB00560.19 BB00
555d8l_G_DA7_DT8BBBBB01680.17 BB01
565d8l_G_DT8_DT9BBBBB01830.17 BB01
575d8l_G_DT9_DC10BBBBB01750.18 BB01
585d8l_G_DC10_DT11BBBBB00770.20 BB00
595d8l_G_DT11_DA12BBBBB00850.21 BB00
605d8l_G_DA12_DG13B12BB04720.23 BB04
615d8l_G_DG13_DA14BBBBB00760.14 BB00
625d8l_G_DA14_DA15B12BB04120.20 BB04
635d8l_G_DA15_DC16BBBBB00730.21 BB00
645d8l_G_DC16_DC17B-ABA01520.22 BA01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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