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Conformers: ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
Crystal structure of human Hsf1 with HSE DNA

Results of the assignment of 11 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
015d5u_A_DG1_DG2BBBBB00710.20 BB00
025d5u_A_DG2_DT3BBBBB01760.16 BB01
035d5u_A_DT3_DT4BBBBB00550.18 BB00
045d5u_A_DT4_DC5BBBBB01650.20 BB01
055d5u_A_DC5_DT6B-ABA05510.32 BA05
065d5u_A_DT6_DA7A-BAB03880.23 AB03
075d5u_A_DA7_DG8B12BB04840.24 BB04
085d5u_A_DG8_DA9miBBB10190.27 BB10
095d5u_A_DA9_DA10B12BB04500.14 BB04
105d5u_A_DA10_DC11BBBBB00710.14 BB00
115d5u_A_DC11_DC12NANNANT00.41 BA05

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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