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Conformers: ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
The crystal structure of the H2AZ nucleosome with H3.3.

Results of the assignment of 290 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0015b33_I_DA1_DT2NANNANT00.60 BB03
0025b33_I_DT2_DC3NANNANT00.81 BB02
0035b33_I_DC3_DA4NANNANT00.51 BB17
0045b33_I_DA4_DA5BBBBB00400.19 BB00
0055b33_I_DA5_DT6NANNANT00.37 BB02
0065b33_I_DT6_DA7BBBBB00800.18 BB00
0075b33_I_DA7_DT8BBBBB00890.14 BB00
0085b33_I_DT8_DC9NANNANT00.53 BB02
0095b33_I_DC9_DC10NANNANT00.76 BA08
0105b33_I_DC10_DA11BBBBB01140.34 BB01
0115b33_I_DA11_DC12BBBBB00750.18 BB00
0125b33_I_DC12_DC13BBwBB02430.30 BB02
0135b33_I_DC13_DT14BBBBB00290.50 BB00
0145b33_I_DT14_DG15NANNANT00.51 BB04
0155b33_I_DG15_DC16BBBBB00190.50 BB00
0165b33_I_DC16_DA17B12BB04160.48 BB04
0175b33_I_DA17_DG18BBBBB00650.30 BB00
0185b33_I_DG18_DA19B12BB04890.16 BB04
0195b33_I_DA19_DT20B12BB04750.21 BB04
0205b33_I_DT20_DT21BBwBB02380.29 BB02
0215b33_I_DT21_DC22B-ABA05280.35 BA05
0225b33_I_DC22_DT23BBBBB00290.34 BB00
0235b33_I_DT23_DA24BBwBB02480.31 BB02
0245b33_I_DA24_DC25BBwBB03390.45 BB03
0255b33_I_DC25_DC26NANNANT00.37 BB17
0265b33_I_DC26_DA27B12BB04150.44 BB04
0275b33_I_DA27_DA28BBBBB00680.18 BB00
0285b33_I_DA28_DA29NANNANT01.09 OP24
0295b33_I_DA29_DA30AAAAA02350.40 AA02
0305b33_I_DA30_DG31A-BAB01770.15 AB01
0315b33_I_DG31_DT32B-ABA10670.20 BA10
0325b33_I_DT32_DG33NANNANT00.59 AA10
0335b33_I_DG33_DT34A-BAB04270.39 AB04
0345b33_I_DT34_DA35BBBBB00520.30 BB00
0355b33_I_DA35_DT36BBBBB00580.38 BB00
0365b33_I_DT36_DT37NANNANT00.44 BB02
0375b33_I_DT37_DT38NANNANT00.54 BA08
0385b33_I_DT38_DG39A-BAB01250.44 AB01
0395b33_I_DG39_DG40BB2BB08720.49 BB08
0405b33_I_DG40_DA41NANNANT00.52 BA05
0415b33_I_DA41_DA42NANNANT00.78 AA05
0425b33_I_DA42_DA43A-BAB01360.44 AB01
0435b33_I_DA43_DC44BBwBB02560.21 BB02
0445b33_I_DC44_DT45miBBB13650.22 BB13
0455b33_I_DT45_DG46NANNANT00.96 BA10
0465b33_I_DG46_DC47NANNANT00.66 BB02
0475b33_I_DC47_DT48BBBBB00140.65 BB00
0485b33_I_DT48_DC49NANNANT00.45 BB08
0495b33_I_DC49_DC50BBBBB00440.38 BB00
0505b33_I_DC50_DA51miBBB15540.33 BB15
0515b33_I_DA51_DT52B-ABA10410.29 BA10
0525b33_I_DT52_DC53A-BAB01120.42 AB01
0535b33_I_DC53_DA54NANNANT00.55 BB10
0545b33_I_DA54_DA55NANNANT00.61 BB12
0555b33_I_DA55_DA56NANNANT00.99 BB13
0565b33_I_DA56_DA57BBBBB00300.38 BB00
0575b33_I_DA57_DG58NANNANT00.37 BB12
0585b33_I_DG58_DG59BBwBB16780.32 BB16
0595b33_I_DG59_DC60BBBBB00640.36 BB00
0605b33_I_DC60_DA61BBBBB00700.22 BB00
0615b33_I_DA61_DT62BBBBB01140.26 BB01
0625b33_I_DT62_DG63A-BAB03900.22 AB03
0635b33_I_DG63_DT64miBBB15400.25 BB15
0645b33_I_DT64_DT65BBBBB00810.14 BB00
0655b33_I_DT65_DC66B12BB04650.31 BB04
0665b33_I_DC66_DA67BB2BB07600.31 BB07
0675b33_I_DA67_DG68miBBB15400.36 BB15
0685b33_I_DG68_DC69BB2BB07590.20 BB07
0695b33_I_DC69_DT70B12BB04920.16 BB04
0705b33_I_DT70_DG71BBBBB00710.21 BB00
0715b33_I_DG71_DA72NANNANT00.33 BB15
0725b33_I_DA72_DA73BBBBB00650.13 BB00
0735b33_I_DA73_DT74BBBBB00680.24 BB00
0745b33_I_DT74_DT75BBBBB00320.18 BB00
0755b33_I_DT75_DC76BBBBB00810.21 BB00
0765b33_I_DC76_DA77BB2BB07950.20 BB07
0775b33_I_DA77_DG78BBBBB00430.28 BB00
0785b33_I_DG78_DC79BB2BB07570.29 BB07
0795b33_I_DC79_DT80B12BB04580.38 BB04
0805b33_I_DT80_DG81B12BB04730.19 BB04
0815b33_I_DG81_DA82BBBBB00820.20 BB00
0825b33_I_DA82_DA83BBBBB00240.15 BB00
0835b33_I_DA83_DC84miBBB15710.20 BB15
0845b33_I_DC84_DA85BBBBB00680.32 BB00
0855b33_I_DA85_DT86BBBBB00760.20 BB00
0865b33_I_DT86_DG87BBBBB00870.19 BB00
0875b33_I_DG87_DC88BB2BB07460.33 BB07
0885b33_I_DC88_DC89B12BB04200.38 BB04
0895b33_I_DC89_DT90B-ABA17710.28 BA17
0905b33_I_DT90_DT91BBBBB00560.18 BB00
0915b33_I_DT91_DT92miBBB15600.25 BB15
0925b33_I_DT92_DT93miBBB15370.27 BB15
0935b33_I_DT93_DG94BBBBB00650.30 BB00
0945b33_I_DG94_DA95NANNANT00.48 BA08
0955b33_I_DA95_DT96NANNANT00.37 AB04
0965b33_I_DT96_DG97A-BAB03610.23 AB03
0975b33_I_DG97_DG98BBBBB00890.15 BB00
0985b33_I_DG98_DA99BB2BB07780.31 BB07
0995b33_I_DA99_DG100BBBBB00290.26 BB00
1005b33_I_DG100_DC101BB2BB08600.35 BB08
1015b33_I_DC101_DA102BBBBB00470.56 BB00
1025b33_I_DA102_DG103B12BB04580.20 BB04
1035b33_I_DG103_DT104NANNANT00.37 BA10
1045b33_I_DT104_DT105NANNANT00.52 BA10
1055b33_I_DT105_DT106NANNANT00.42 BB03
1065b33_I_DT106_DC107BBBBB00310.57 BB00
1075b33_I_DC107_DC108NANNANT00.52 BB08
1085b33_I_DC108_DA109B12BB04540.39 BB04
1095b33_I_DA109_DA110BBBBB00900.21 BB00
1105b33_I_DA110_DA111NANNANT00.46 BB13
1115b33_I_DA111_DT112NANNANT00.35 AB03
1125b33_I_DT112_DA113BBBBB00810.29 BB00
1135b33_I_DA113_DC114B-ABA09510.36 BA09
1145b33_I_DC114_DA115NANNANT00.32 BB16
1155b33_I_DA115_DC116BBwBB02720.28 BB02
1165b33_I_DC116_DT117BBBBB00370.22 BB00
1175b33_I_DT117_DT118BBBBB00900.19 BB00
1185b33_I_DT118_DT119B-ABA08700.39 BA08
1195b33_I_DT119_DT120A-BAB03500.32 AB03
1205b33_I_DT120_DG121B12BB04660.35 BB04
1215b33_I_DG121_DG122BBBBB00730.42 BB00
1225b33_I_DG122_DT123BBBBB00850.22 BB00
1235b33_I_DT123_DA124BBBBB00640.21 BB00
1245b33_I_DA124_DG125BBwBB11610.30 BB11
1255b33_I_DG125_DA126NANNANT00.41 BB03
1265b33_I_DA126_DA127NANNANT00.47 BB17
1275b33_I_DA127_DT128NANNANT00.54 BB13
1285b33_I_DT128_DC129NANNANT00.69 BB02
1295b33_I_DC129_DT130BB2BB07280.27 BB07
1305b33_I_DT130_DG131BBBBB00660.30 BB00
1315b33_I_DG131_DC132BB2BB07850.21 BB07
1325b33_I_DC132_DA133BBBBB00440.48 BB00
1335b33_I_DA133_DG134B-ABA08830.21 BA08
1345b33_I_DG134_DG135AAAAA00560.30 AA00
1355b33_I_DG135_DT136A-BAB01360.30 AB01
1365b33_I_DT136_DG137BBBBB00190.43 BB00
1375b33_I_DG137_DG138BB2BB07750.20 BB07
1385b33_I_DG138_DA139BBwBB02300.39 BB02
1395b33_I_DA139_DT140BBBBB00350.38 BB00
1405b33_I_DT140_DA141BBBBB00670.17 BB00
1415b33_I_DA141_DT142BBBBB01860.14 BB01
1425b33_I_DT142_DT143BBBBB00770.25 BB00
1435b33_I_DT143_DG144B12BB04690.14 BB04
1445b33_I_DG144_DA145BBBBB00670.28 BB00
1455b33_I_DA145_DT146NANNANT00.65 IC07
1465b33_J_DA147_DT148BBwBB03460.49 BB03
1475b33_J_DT148_DC149NANNANT00.72 BB03
1485b33_J_DC149_DA150NANNANT00.46 BB03
1495b33_J_DA150_DA151BBBBB00830.26 BB00
1505b33_J_DA151_DT152miBBB12690.36 BB12
1515b33_J_DT152_DA153NANNANT00.83 BA10
1525b33_J_DA153_DT154miBBB15720.23 BB15
1535b33_J_DT154_DC155BBBBB00510.28 BB00
1545b33_J_DC155_DC156miBBB15120.32 BB15
1555b33_J_DC156_DA157B12BB05400.30 BB05
1565b33_J_DA157_DC158BBBBB00110.47 BB00
1575b33_J_DC158_DC159BBBBB01470.28 BB01
1585b33_J_DC159_DT160BBBBB01480.19 BB01
1595b33_J_DT160_DG161BBBBB00310.37 BB00
1605b33_J_DG161_DC162BBwBB02180.57 BB02
1615b33_J_DC162_DA163BBBBB00160.39 BB00
1625b33_J_DA163_DG164BB2BB07480.28 BB07
1635b33_J_DG164_DA165BBwBB02250.32 BB02
1645b33_J_DA165_DT166BBwBB02420.25 BB02
1655b33_J_DT166_DT167BBBBB00570.28 BB00
1665b33_J_DT167_DC168B12BB04870.26 BB04
1675b33_J_DC168_DT169BBBBB00480.40 BB00
1685b33_J_DT169_DA170BBBBB00520.29 BB00
1695b33_J_DA170_DC171NANNANT00.42 BB05
1705b33_J_DC171_DC172NANNANT00.38 BB03
1715b33_J_DC172_DA173NANNANT00.58 BB03
1725b33_J_DA173_DA174BB2BB07240.40 BB07
1735b33_J_DA174_DA175NANNANT00.53 BB08
1745b33_J_DA175_DA176NANNANT00.39 BB16
1755b33_J_DA176_DG177BBBBB00770.20 BB00
1765b33_J_DG177_DT178BBwBB02500.29 BB02
1775b33_J_DT178_DG179BBBBB00540.30 BB00
1785b33_J_DG179_DT180BBwBB02570.28 BB02
1795b33_J_DT180_DA181BBBBB00300.22 BB00
1805b33_J_DA181_DT182NANNANT00.50 BB02
1815b33_J_DT182_DT183NANNANT00.45 BB02
1825b33_J_DT183_DT184BBBBB00350.34 BB00
1835b33_J_DT184_DG185BB2BB07680.31 BB07
1845b33_J_DG185_DG186B12BB04300.35 BB04
1855b33_J_DG186_DA187BB2BB07480.36 BB07
1865b33_J_DA187_DA188NANNANT00.51 BA09
1875b33_J_DA188_DA189NANNANT00.59 AA03
1885b33_J_DA189_DC190NANNANT00.44 BB03
1895b33_J_DC190_DT191BBBBB00530.43 BB00
1905b33_J_DT191_DG192B12BB04630.30 BB04
1915b33_J_DG192_DC193NANNANT00.38 BB02
1925b33_J_DC193_DT194NANNANT00.43 BB08
1935b33_J_DT194_DC195BBBBB00180.60 BB00
1945b33_J_DC195_DC196BB2BB07610.20 BB07
1955b33_J_DC196_DA197BBBBB00690.32 BB00
1965b33_J_DA197_DT198BBwBB02110.29 BB02
1975b33_J_DT198_DC199BBBBB00300.33 BB00
1985b33_J_DC199_DA200miBBB10200.34 BB10
1995b33_J_DA200_DA201miBBB10620.25 BB10
2005b33_J_DA201_DA202B12BB04240.17 BB04
2015b33_J_DA202_DA203miBBB10360.28 BB10
2025b33_J_DA203_DG204BB2BB07670.17 BB07
2035b33_J_DG204_DG205BB2BB07640.28 BB07
2045b33_J_DG205_DC206NANNANT00.28 BB02
2055b33_J_DC206_DA207BBBBB00600.39 BB00
2065b33_J_DA207_DT208BBBBB00930.12 BB00
2075b33_J_DT208_DG209BBBBB00420.25 BB00
2085b33_J_DG209_DT210BBBBB00640.28 BB00
2095b33_J_DT210_DT211miBBB15550.29 BB15
2105b33_J_DT211_DC212BBBBB00860.17 BB00
2115b33_J_DC212_DA213BBBBB00630.31 BB00
2125b33_J_DA213_DG214BB2BB07770.26 BB07
2135b33_J_DG214_DC215BBBBB00570.26 BB00
2145b33_J_DC215_DT216BB2BB07650.20 BB07
2155b33_J_DT216_DG217B12BB04540.35 BB04
2165b33_J_DG217_DA218B12BB04620.25 BB04
2175b33_J_DA218_DA219B12BB04480.24 BB04
2185b33_J_DA219_DT220BBBBB00710.27 BB00
2195b33_J_DT220_DT221BBBBB00820.17 BB00
2205b33_J_DT221_DC222BBBBB00890.12 BB00
2215b33_J_DC222_DA223miBBB10530.33 BB10
2225b33_J_DA223_DG224BB2BB07740.16 BB07
2235b33_J_DG224_DC225BBBBB00470.22 BB00
2245b33_J_DC225_DT226BB2BB07680.20 BB07
2255b33_J_DT226_DG227B12BB04590.39 BB04
2265b33_J_DG227_DA228B12BB04570.29 BB04
2275b33_J_DA228_DA229BBBBB00620.19 BB00
2285b33_J_DA229_DC230B-ABA05820.15 BA05
2295b33_J_DC230_DA231NANNANT00.49 BB10
2305b33_J_DA231_DT232BBwBB02180.41 BB02
2315b33_J_DT232_DG233BBBBB00220.39 BB00
2325b33_J_DG233_DC234B12BB04390.24 BB04
2335b33_J_DC234_DC235NANNANT00.26 BB07
2345b33_J_DC235_DT236BBBBB00770.34 BB00
2355b33_J_DT236_DT237B12BB04700.26 BB04
2365b33_J_DT237_DT238BBBBB00700.16 BB00
2375b33_J_DT238_DT239BBBBB00280.31 BB00
2385b33_J_DT239_DG240NANNANT00.46 BB07
2395b33_J_DG240_DA241NANNANT00.58 BB08
2405b33_J_DA241_DT242BBwBB02410.48 BB02
2415b33_J_DT242_DG243NANNANT00.36 BB15
2425b33_J_DG243_DG244NANNANT00.57 BB10
2435b33_J_DG244_DA245BBBBB00600.21 BB00
2445b33_J_DA245_DG246BB2BB07860.26 BB07
2455b33_J_DG246_DC247BBBBB00500.35 BB00
2465b33_J_DC247_DA248NANNANT00.63 BB08
2475b33_J_DA248_DG249BBBBB00600.37 BB00
2485b33_J_DG249_DT250BBwBB02530.41 BB02
2495b33_J_DT250_DT251BBBBB00520.45 BB00
2505b33_J_DT251_DT252miBBB10690.26 BB10
2515b33_J_DT252_DC253BBBBB01520.31 BB01
2525b33_J_DC253_DC254NANNANT00.55 BB13
2535b33_J_DC254_DA255BB2BB07350.42 BB07
2545b33_J_DA255_DA256BBBBB00600.37 BB00
2555b33_J_DA256_DA257B12BB04140.38 BB04
2565b33_J_DA257_DT258B-ABA08500.34 BA08
2575b33_J_DT258_DA259A-BAB03430.31 AB03
2585b33_J_DA259_DC260NANNANT00.41 BB02
2595b33_J_DC260_DA261NANNANT00.49 BA05
2605b33_J_DA261_DC262NANNANT00.64 AB05
2615b33_J_DC262_DT263NANNANT00.42 BB00
2625b33_J_DT263_DT264NANNANT00.45 BB13
2635b33_J_DT264_DT265NANNANT00.59 BB16
2645b33_J_DT265_DT266BBBBB00440.27 BB00
2655b33_J_DT266_DG267B12BB04230.40 BB04
2665b33_J_DG267_DG268NANNANT00.49 BB02
2675b33_J_DG268_DT269NANNANT00.62 BB00
2685b33_J_DT269_DA270BBBBB00710.32 BB00
2695b33_J_DA270_DG271NANNANT00.62 BB02
2705b33_J_DG271_DA272BBwBB03660.27 BB03
2715b33_J_DA272_DA273B-ABA05680.34 BA05
2725b33_J_DA273_DT274NANNANT00.29 BB03
2735b33_J_DT274_DC275BB2BB08390.52 BB08
2745b33_J_DC275_DT276BBwBB02200.59 BB02
2755b33_J_DT276_DG277NANNANT00.63 BB08
2765b33_J_DG277_DC278BBBBB00690.33 BB00
2775b33_J_DC278_DA279BB2BB07490.20 BB07
2785b33_J_DA279_DG280NANNANT00.61 BB11
2795b33_J_DG280_DG281B12BB04550.35 BB04
2805b33_J_DG281_DT282BBwBB02230.36 BB02
2815b33_J_DT282_DG283miBBB10450.38 BB10
2825b33_J_DG283_DG284BBwBB11530.43 BB11
2835b33_J_DG284_DA285NANNANT00.57 BB11
2845b33_J_DA285_DT286BBBBB00160.39 BB00
2855b33_J_DT286_DA287miBBB12630.38 BB12
2865b33_J_DA287_DT288NANNANT00.41 BB16
2875b33_J_DT288_DT289B12BB04490.36 BB04
2885b33_J_DT289_DG290BBBBB00730.24 BB00
2895b33_J_DG290_DA291B12BB04770.17 BB04
2905b33_J_DA291_DT292BBBBB00650.20 BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

Browse conformers

Return up to random steps in PDB structures ( include large structures )

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