DNATCO v4.1: results

The crystal structure of the nucleosome containing cyclobutane pyrimidine dimer

Results of the assignment of 284 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	5b24_I_DA1_DT2	BBw	BB03	46	0.46	BB03
002	5b24_I_DT2_DC3	NAN	NANT	0	0.58	BB15
003	5b24_I_DC3_DA4	BBw	BB11	50	0.46	BB11
004	5b24_I_DA4_DA5	BBw	BB02	21	0.53	BB02
005	5b24_I_DA5_DT6	BBB	BB00	28	0.35	BB00
006	5b24_I_DT6_DA7	BBB	BB00	34	0.36	BB00
007	5b24_I_DA7_DT8	BBB	BB00	70	0.25	BB00
008	5b24_I_DT8_DC9	B12	BB04	30	0.28	BB04
009	5b24_I_DC9_DC10	miB	BB15	49	0.31	BB15
010	5b24_I_DC10_DA11	B12	BB04	43	0.32	BB04
011	5b24_I_DA11_DC12	BBB	BB00	66	0.22	BB00
012	5b24_I_DC12_DC13	NAN	NANT	0	0.34	BB02
013	5b24_I_DC13_DT14	BBB	BB00	42	0.55	BB00
014	5b24_I_DT14_DG15	BB2	BB07	80	0.32	BB07
015	5b24_I_DG15_DC16	miB	BB15	20	0.29	BB15
016	5b24_I_DC16_DA17	BB2	BB07	62	0.37	BB07
017	5b24_I_DA17_DG18	BBB	BB00	63	0.23	BB00
018	5b24_I_DG18_DA19	NAN	NANT	0	0.42	BA08
019	5b24_I_DA19_DT20	A-B	AB03	41	0.36	AB03
020	5b24_I_DT20_DT21	BBB	BB00	21	0.23	BB00
021	5b24_I_DT21_DC22	BBB	BB00	89	0.15	BB00
022	5b24_I_DC22_DT23	BBw	BB02	41	0.29	BB02
023	5b24_I_DT23_DA24	BBw	BB02	37	0.46	BB02
024	5b24_I_DA24_DC25	BBw	BB03	38	0.39	BB03
025	5b24_I_DC25_DC26	BBB	BB00	50	0.28	BB00
026	5b24_I_DC26_DA27	BB2	BB07	63	0.30	BB07
027	5b24_I_DA27_DA28	BBB	BB00	90	0.08	BB00
028	5b24_I_DA28_DA29	BB2	BB08	83	0.33	BB08
029	5b24_I_DA29_DA30	BBB	BB00	20	0.34	BB00
030	5b24_I_DA30_DG31	BBB	BB00	30	0.13	BB00
031	5b24_I_DG31_DT32	BBw	BB02	59	0.27	BB02
032	5b24_I_DT32_DG33	BBB	BB00	32	0.21	BB00
033	5b24_I_DG33_DT34	miB	BB13	89	0.22	BB13
034	5b24_I_DT34_DA35	BBB	BB00	23	0.39	BB00
035	5b24_I_DA35_DT36	BBw	BB03	78	0.33	BB03
036	5b24_I_DT36_DT37	NAN	NANT	0	0.65	BB02
037	5b24_I_DT37_DT38	miB	BB10	45	0.38	BB10
038	5b24_I_DT38_DG39	B12	BB04	35	0.45	BB04
039	5b24_I_DG39_DG40	NAN	NANT	0	0.57	BB08
040	5b24_I_DG40_DA41	NAN	NANT	0	0.85	BB02
041	5b24_I_DA41_DA42	BBw	BB03	30	0.43	BB03
042	5b24_I_DA42_DA43	BBw	BB02	20	0.45	BB02
043	5b24_I_DA43_DC44	BBw	BB02	18	0.28	BB02
044	5b24_I_DC44_DT45	miB	BB12	36	0.49	BB12
045	5b24_I_DT45_DG46	NAN	NANT	0	0.81	BB08
046	5b24_I_DG46_DC47	NAN	NANT	0	0.56	BB02
047	5b24_I_DC47_DT48	NAN	NANT	0	0.81	BB02
048	5b24_I_DT48_DC49	B12	BB04	18	0.39	BB04
049	5b24_I_DC49_DC50	B12	BB04	86	0.15	BB04
050	5b24_I_DC50_DA51	miB	BB15	47	0.23	BB15
051	5b24_I_DA51_DT52	NAN	NANT	0	0.70	BB02
052	5b24_I_DT52_DC53	NAN	NANT	0	0.55	BB02
053	5b24_I_DC53_DA54	BBB	BB00	11	0.17	BB00
054	5b24_I_DA54_DA55	miB	BB13	69	0.36	BB13
055	5b24_I_DA55_DA56	NAN	NANT	0	0.65	BB03
056	5b24_I_DA56_DA57	NAN	NANT	0	0.56	BB17
057	5b24_I_DA57_DG58	miB	BB12	52	0.42	BB12
058	5b24_I_DG58_DG59	BBB	BB01	10	0.53	BB01
059	5b24_I_DG59_DC60	BBB	BB00	20	0.26	BB00
060	5b24_I_DC60_DA61	B12	BB04	65	0.21	BB04
061	5b24_I_DA61_DT62	BBB	BB00	34	0.26	BB00
062	5b24_I_DT62_DG63	B12	BB04	47	0.24	BB04
063	5b24_I_DG63_DT64	B12	BB04	59	0.23	BB04
064	5b24_I_DT64_DT65	BBB	BB00	67	0.24	BB00
065	5b24_I_DT65_DC66	BBB	BB00	87	0.15	BB00
066	5b24_I_DC66_DA67	NAN	NANT	0	0.37	BB07
067	5b24_I_DA67_DG68	BBB	BB00	16	0.33	BB00
068	5b24_I_DG68_DC69	NAN	NANT	0	0.44	BB07
069	5b24_I_DC69_DT70	BBB	BB00	42	0.36	BB00
070	5b24_I_DT70_DG71	BBB	BB00	73	0.21	BB00
071	5b24_I_DG71_DA72	B12	BB04	15	0.21	BB04
072	5b24_I_DA72_DA73	miB	BB15	57	0.28	BB15
073	5b24_I_DA73_DT74	BBB	BB00	65	0.22	BB00
074	5b24_I_DT74_DT75	BBB	BB00	64	0.22	BB00
075	5b24_I_DT75_DC76	BBB	BB00	97	0.09	BB00
076	5b24_I_DC76_DA77	BB2	BB07	80	0.21	BB07
077	5b24_I_DA77_DG78	miB	BB15	24	0.41	BB15
078	5b24_I_DG78_DC79	BB2	BB07	41	0.22	BB07
079	5b24_I_DC79_DT80	B12	BB04	63	0.37	BB04
080	5b24_I_DT80_DG81	B12	BB04	52	0.19	BB04
081	5b24_I_DG81_DA82	BBw	BB17	58	0.35	BB17
082	5b24_I_DA82_DA83	BBB	BB00	12	0.21	BB00
083	5b24_I_DA83_DC84	miB	BB10	19	0.28	BB10
084	5b24_I_DC84_DA85	B12	BB04	77	0.17	BB04
085	5b24_I_DA85_DT86	miB	BB15	86	0.22	BB15
086	5b24_I_DT86_DG87	B12	BB04	62	0.34	BB04
087	5b24_I_DG87_DC88	BB2	BB07	70	0.31	BB07
088	5b24_I_DC88_DC89	B12	BB04	16	0.51	BB04
089	5b24_I_DC89_DT90	BB2	BB07	66	0.28	BB07
090	5b24_I_DT90_DT91	BBB	BB01	68	0.18	BB01
091	5b24_I_DT91_DT92	miB	BB15	42	0.28	BB15
092	5b24_I_DT92_DT93	BBw	BB02	15	0.30	BB02
093	5b24_I_DT93_DG94	miB	BB10	65	0.23	BB10
094	5b24_I_DG94_DA95	BBB	BB00	33	0.40	BB00
095	5b24_I_DA95_DT96	BBw	BB02	59	0.26	BB02
096	5b24_I_DT96_DG97	BBB	BB00	19	0.34	BB00
097	5b24_I_DG97_DG98	BBB	BB00	74	0.20	BB00
098	5b24_I_DG98_DA99	BB2	BB07	73	0.24	BB07
099	5b24_I_DA99_DG100	NAN	NANT	0	0.41	BB10
100	5b24_I_DG100_DC101	NAN	NANT	0	0.54	BB07
101	5b24_I_DC101_DA102	NAN	NANT	0	0.55	BB15
102	5b24_I_DA102_DG103	B12	BB04	88	0.21	BB04
103	5b24_I_DG103_DT104	BBw	BB02	26	0.35	BB02
104	5b24_I_DT104_DT105	NAN	NANT	0	0.40	BA10
105	5b24_I_DT105_DT106	BBw	BB16	49	0.53	BB16
106	5b24_I_DT106_DC107	BBw	BB02	29	0.35	BB02
107	5b24_I_DC107_DC108	BB2	BB08	59	0.45	BB08
108	5b24_I_DC108_DA109	BBB	BB00	26	0.44	BB00
109	5b24_I_DA109_DA110	BBB	BB00	78	0.20	BB00
110	5b24_I_DA110_DA111	B12	BB04	73	0.14	BB04
111	5b24_I_DA111_DT112	BBB	BB00	77	0.29	BB00
112	5b24_I_DT112_DA113	BBB	BB00	31	0.15	BB00
113	5b24_I_DA113_DC114	miB	BB13	91	0.27	BB13
114	5b24_I_DC114_DA115	NAN	NANT	0	0.47	BB15
115	5b24_I_DA115_DC116	BBw	BB02	36	0.34	BB02
116	5b24_I_DT118_DT119	A-B	AB03	10	0.28	AB03
117	5b24_I_DT119_DG120	B12	BB04	80	0.28	BB04
118	5b24_I_DG120_DG121	B12	BB04	92	0.16	BB04
119	5b24_I_DG121_DT122	miB	BB15	17	0.28	BB15
120	5b24_I_DT122_DA123	B12	BB04	68	0.28	BB04
121	5b24_I_DA123_DG124	BBw	BB11	63	0.17	BB11
122	5b24_I_DG124_DA125	NAN	NANT	0	0.52	BB03
123	5b24_I_DA125_DA126	BBB	BB00	49	0.38	BB00
124	5b24_I_DA126_DT127	miB	BB12	34	0.34	BB12
125	5b24_I_DT127_DC128	NAN	NANT	0	0.64	BB15
126	5b24_I_DC128_DT129	BB2	BB07	75	0.38	BB07
127	5b24_I_DT129_DG130	BBw	BB02	29	0.42	BB02
128	5b24_I_DG130_DC131	BBB	BB00	12	0.35	BB00
129	5b24_I_DC131_DA132	NAN	NANT	0	0.70	BB04
130	5b24_I_DA132_DG133	NAN	NANT	0	0.67	BB02
131	5b24_I_DG133_DG134	NAN	NANT	0	0.54	BB02
132	5b24_I_DG134_DT135	miB	BB13	74	0.33	BB13
133	5b24_I_DT135_DG136	BBB	BB00	24	0.53	BB00
134	5b24_I_DG136_DG137	B12	BB04	77	0.21	BB04
135	5b24_I_DG137_DA138	BBw	BB11	49	0.38	BB11
136	5b24_I_DA138_DT139	NAN	NANT	0	0.52	BB02
137	5b24_I_DT139_DA140	BBB	BB00	47	0.21	BB00
138	5b24_I_DA140_DT141	BBB	BB00	27	0.19	BB00
139	5b24_I_DT141_DT142	BBB	BB00	65	0.24	BB00
140	5b24_I_DT142_DG143	B12	BB04	72	0.22	BB04
141	5b24_I_DG143_DA144	BBB	BB00	70	0.24	BB00
142	5b24_I_DA144_DT145	NAN	NANT	0	0.53	BB08
143	5b24_J_DA146_DT147	BBw	BB03	81	0.24	BB03
144	5b24_J_DT147_DC148	BBw	BB02	25	0.40	BB02
145	5b24_J_DC148_DA149	BBw	BB03	44	0.26	BB03
146	5b24_J_DA149_DA150	miB	BB15	33	0.37	BB15
147	5b24_J_DA150_DT151	miB	BB12	84	0.30	BB12
148	5b24_J_DT151_DA152	NAN	NANT	0	0.57	BB03
149	5b24_J_DA152_DT153	BBw	BB02	63	0.23	BB02
150	5b24_J_DT153_DC154	miB	BB13	63	0.38	BB13
151	5b24_J_DC154_DC155	A-B	AB03	15	0.52	AB03
152	5b24_J_DC155_DA156	BBw	BB02	17	0.52	BB02
153	5b24_J_DA156_DC157	BBB	BB00	23	0.27	BB00
154	5b24_J_DC157_DC158	BBw	BB02	42	0.32	BB02
155	5b24_J_DC158_DT159	miB	BB15	44	0.37	BB15
156	5b24_J_DT159_DG160	B12	BB04	67	0.34	BB04
157	5b24_J_DG160_DC161	NAN	NANT	0	0.30	BB15
158	5b24_J_DC161_DA162	NAN	NANT	0	0.55	BB10
159	5b24_J_DA162_DG163	BBB	BB00	25	0.57	BB00
160	5b24_J_DG163_DA164	NAN	NANT	0	0.36	BB05
161	5b24_J_DA164_DT165	BBB	BB00	71	0.23	BB00
162	5b24_J_DT165_DT166	BBB	BB00	70	0.18	BB00
163	5b24_J_DT166_DC167	BBB	BB00	72	0.23	BB00
164	5b24_J_DC167_DT168	BBw	BB02	48	0.31	BB02
165	5b24_J_DT168_DA169	BBw	BB02	37	0.36	BB02
166	5b24_J_DA169_DC170	NAN	NANT	0	0.48	BA10
167	5b24_J_DC170_DC171	NAN	NANT	0	0.34	BB03
168	5b24_J_DC171_DA172	NAN	NANT	0	0.40	BB11
169	5b24_J_DA172_DA173	BBB	BB00	47	0.36	BB00
170	5b24_J_DA173_DA174	NAN	NANT	0	0.60	BB02
171	5b24_J_DA174_DA175	BBB	BB00	32	0.36	BB00
172	5b24_J_DA175_DG176	BBB	BB00	78	0.16	BB00
173	5b24_J_DG176_DT177	BBw	BB02	61	0.28	BB02
174	5b24_J_DT177_DG178	miB	BB15	58	0.34	BB15
175	5b24_J_DG178_DT179	B12	BB04	34	0.33	BB04
176	5b24_J_DT179_DA180	BBB	BB00	88	0.21	BB00
177	5b24_J_DA180_DT181	BBw	BB02	41	0.43	BB02
178	5b24_J_DT181_DT182	NAN	NANT	0	0.50	BB11
179	5b24_J_DT182_DT183	NAN	NANT	0	0.39	BB15
180	5b24_J_DT183_DG184	BB2	BB07	66	0.23	BB07
181	5b24_J_DG184_DG185	BBB	BB00	74	0.25	BB00
182	5b24_J_DG185_DA186	BB2	BB07	45	0.20	BB07
183	5b24_J_DA186_DA187	BBB	BB00	73	0.17	BB00
184	5b24_J_DA187_DA188	BBB	BB00	72	0.13	BB00
185	5b24_J_DA188_DC189	miB	BB13	87	0.20	BB13
186	5b24_J_DC189_DT190	BBB	BB00	27	0.56	BB00
187	5b24_J_DT190_DG191	BB2	BB07	85	0.14	BB07
188	5b24_J_DG191_DC192	miB	BB15	35	0.32	BB15
189	5b24_J_DC192_DT193	BB2	BB08	39	0.49	BB08
190	5b24_J_DT193_DC194	NAN	NANT	0	0.63	BB15
191	5b24_J_DC194_DC195	BB2	BB07	60	0.24	BB07
192	5b24_J_DC195_DA196	B12	BB04	51	0.23	BB04
193	5b24_J_DA196_DT197	BBB	BB00	11	0.26	BB00
194	5b24_J_DT197_DC198	BBB	BB01	17	0.25	BB01
195	5b24_J_DC198_DA199	BBB	BB00	25	0.30	BB00
196	5b24_J_DA199_DA200	miB	BB10	42	0.26	BB10
197	5b24_J_DA200_DA201	B12	BB04	29	0.21	BB04
198	5b24_J_DA201_DA202	BBB	BB00	61	0.25	BB00
199	5b24_J_DA202_DG203	miB	BB10	71	0.34	BB10
200	5b24_J_DG203_DG204	BB2	BB07	81	0.28	BB07
201	5b24_J_DG204_DC205	BBB	BB00	82	0.24	BB00
202	5b24_J_DC205_DA206	B12	BB04	51	0.23	BB04
203	5b24_J_DA206_DT207	BBB	BB00	77	0.13	BB00
204	5b24_J_DT207_DG208	B12	BB04	52	0.33	BB04
205	5b24_J_DG208_DT209	NAN	NANT	0	0.32	BB10
206	5b24_J_DT209_DT210	B12	BB04	75	0.22	BB04
207	5b24_J_DT210_DC211	BBB	BB00	63	0.22	BB00
208	5b24_J_DC211_DA212	BBB	BB00	48	0.27	BB00
209	5b24_J_DA212_DG213	BB2	BB07	57	0.33	BB07
210	5b24_J_DG213_DC214	BBB	BB00	20	0.26	BB00
211	5b24_J_DC214_DT215	BB2	BB07	30	0.26	BB07
212	5b24_J_DT215_DG216	B12	BB04	58	0.31	BB04
213	5b24_J_DG216_DA217	BBB	BB00	82	0.18	BB00
214	5b24_J_DA217_DA218	miB	BB10	60	0.22	BB10
215	5b24_J_DA218_DT219	BBB	BB00	43	0.30	BB00
216	5b24_J_DT219_DT220	BBB	BB00	78	0.16	BB00
217	5b24_J_DT220_DC221	BBB	BB00	96	0.11	BB00
218	5b24_J_DC221_DA222	B12	BB04	41	0.24	BB04
219	5b24_J_DA222_DG223	BB2	BB07	49	0.17	BB07
220	5b24_J_DG223_DC224	miB	BB10	51	0.27	BB10
221	5b24_J_DC224_DT225	BB2	BB07	51	0.20	BB07
222	5b24_J_DT225_DG226	B12	BB04	46	0.48	BB04
223	5b24_J_DG226_DA227	B12	BB04	69	0.32	BB04
224	5b24_J_DA227_DA228	BBB	BB00	92	0.15	BB00
225	5b24_J_DA228_DC229	NAN	NANT	0	0.37	BB02
226	5b24_J_DC229_DA230	B12	BB04	60	0.30	BB04
227	5b24_J_DA230_DT231	miB	BB15	71	0.24	BB15
228	5b24_J_DT231_DG232	B12	BB04	61	0.30	BB04
229	5b24_J_DG232_DC233	BBB	BB00	55	0.33	BB00
230	5b24_J_DC233_DC234	BB2	BB07	40	0.34	BB07
231	5b24_J_DC234_DT235	BB2	BB07	66	0.15	BB07
232	5b24_J_DT235_DT236	BBB	BB00	56	0.37	BB00
233	5b24_J_DT236_DT237	BBw	BB02	61	0.26	BB02
234	5b24_J_DT237_DT238	BBB	BB00	15	0.32	BB00
235	5b24_J_DT238_DG239	NAN	NANT	0	0.51	BB07
236	5b24_J_DG239_DA240	miB	BB12	79	0.31	BB12
237	5b24_J_DA240_DT241	NAN	NANT	0	0.74	BB02
238	5b24_J_DT241_DG242	NAN	NANT	0	0.35	BA08
239	5b24_J_DG242_DG243	miB	BB14	91	0.20	BB14
240	5b24_J_DG243_DA244	BBB	BB00	80	0.22	BB00
241	5b24_J_DA244_DG245	BB2	BB07	83	0.21	BB07
242	5b24_J_DG245_DC246	miB	BB15	46	0.26	BB15
243	5b24_J_DC246_DA247	NAN	NANT	0	0.55	BB08
244	5b24_J_DA247_DG248	BBw	BB02	53	0.33	BB02
245	5b24_J_DG248_DT249	BBw	BB02	37	0.29	BB02
246	5b24_J_DT249_DT250	B12	BB05	28	0.43	BB05
247	5b24_J_DT250_DT251	NAN	NANT	0	0.61	BB02
248	5b24_J_DT251_DC252	miB	BB12	51	0.34	BB12
249	5b24_J_DC252_DC253	NAN	NANT	0	0.83	BA10
250	5b24_J_DC253_DA254	BB2	BB07	75	0.34	BB07
251	5b24_J_DA254_DA255	BBB	BB00	65	0.26	BB00
252	5b24_J_DA255_DA256	miB	BB10	53	0.37	BB10
253	5b24_J_DA256_DT257	BBw	BB02	56	0.32	BB02
254	5b24_J_DT257_DA258	BBB	BB00	34	0.26	BB00
255	5b24_J_DA258_DC259	NAN	NANT	0	0.49	BB02
256	5b24_J_DC259_DA260	BBB	BB00	17	0.58	BB00
257	5b24_J_DA260_DC261	BBw	BB02	24	0.41	BB02
258	5b24_J_DT263_DT264	miB	BB13	58	0.29	BB13
259	5b24_J_DT264_DG265	B12	BB04	9	0.63	BB04
260	5b24_J_DG265_DG266	BBw	BB02	25	0.33	BB02
261	5b24_J_DG266_DT267	BBB	BB00	10	0.35	BB00
262	5b24_J_DT267_DA268	B12	BB04	86	0.21	BB04
263	5b24_J_DA268_DG269	NAN	NANT	0	0.60	BB12
264	5b24_J_DG269_DA270	NAN	NANT	0	0.55	BB13
265	5b24_J_DA270_DA271	BBB	BB00	49	0.45	BB00
266	5b24_J_DA271_DT272	NAN	NANT	0	0.57	BB02
267	5b24_J_DT272_DC273	BBw	BB03	76	0.22	BB03
268	5b24_J_DC273_DT274	NAN	NANT	0	0.61	BB02
269	5b24_J_DT274_DG275	NAN	NANT	0	0.63	BB08
270	5b24_J_DG275_DC276	BBB	BB00	62	0.39	BB00
271	5b24_J_DC276_DA277	BB2	BB07	71	0.23	BB07
272	5b24_J_DA277_DG278	BBB	BB00	79	0.25	BB00
273	5b24_J_DG278_DG279	B12	BB04	18	0.23	BB04
274	5b24_J_DG279_DT280	BBw	BB02	37	0.30	BB02
275	5b24_J_DT280_DG281	BBB	BB00	29	0.28	BB00
276	5b24_J_DG281_DG282	NAN	NANT	0	0.55	BB11
277	5b24_J_DG282_DA283	BBw	BB17	54	0.33	BB17
278	5b24_J_DA283_DT284	miB	BB15	38	0.34	BB15
279	5b24_J_DT284_DA285	NAN	NANT	0	0.61	BB02
280	5b24_J_DA285_DT286	BBB	BB00	35	0.37	BB00
281	5b24_J_DT286_DT287	BBB	BB00	60	0.13	BB00
282	5b24_J_DT287_DG288	BBB	BB00	72	0.24	BB00
283	5b24_J_DG288_DA289	B12	BB04	94	0.18	BB04
284	5b24_J_DA289_DT290	BBw	BB02	39	0.38	BB02

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

Results of the assignment of 284 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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