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Conformers: ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
Nucleosome disassembly by RSC and SWI/SNF is enhanced by H3 acetylation near the nucleosome dyad axis

Results of the assignment of 292 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0014xzq_I_DA1_DT2BBBBB00580.28 BB00
0024xzq_I_DT2_DC3BBBBB00500.28 BB00
0034xzq_I_DC3_DA4B12BB04820.18 BB04
0044xzq_I_DA4_DA5B12BB04960.08 BB04
0054xzq_I_DA5_DT6BBwBB02680.13 BB02
0064xzq_I_DT6_DA7BBBBB00460.40 BB00
0074xzq_I_DA7_DT8BBBBB00910.16 BB00
0084xzq_I_DT8_DC9BBBBB00690.25 BB00
0094xzq_I_DC9_DC10BBBBB00730.32 BB00
0104xzq_I_DC10_DA11BB2BB07660.15 BB07
0114xzq_I_DA11_DC12BBBBB00780.24 BB00
0124xzq_I_DC12_DC13BBBBB00540.27 BB00
0134xzq_I_DC13_DT14B12BB04410.20 BB04
0144xzq_I_DT14_DG15B12BB04800.19 BB04
0154xzq_I_DG15_DC16BBBBB00910.17 BB00
0164xzq_I_DC16_DA17BB2BB07700.36 BB07
0174xzq_I_DA17_DG18BBBBB00700.26 BB00
0184xzq_I_DG18_DA19BBBBB00730.26 BB00
0194xzq_I_DA19_DT20BBBBB00840.29 BB00
0204xzq_I_DT20_DA21BBBBB00850.27 BB00
0214xzq_I_DA21_DC22BBwBB02610.22 BB02
0224xzq_I_DC22_DT23B12BB04750.18 BB04
0234xzq_I_DT23_DA24BBwBB02300.34 BB02
0244xzq_I_DA24_DC25BBBBB00870.18 BB00
0254xzq_I_DC25_DC26NANNANT00.42 BB00
0264xzq_I_DC26_DA27BB2BB07520.39 BB07
0274xzq_I_DA27_DA28B12BB04460.28 BB04
0284xzq_I_DA28_DA29BBBBB00690.26 BB00
0294xzq_I_DA29_DA30BBBBB00900.17 BB00
0304xzq_I_DA30_DG31B12BB04730.20 BB04
0314xzq_I_DG31_DT32BBBBB00660.33 BB00
0324xzq_I_DT32_DG33BBBBB00940.11 BB00
0334xzq_I_DG33_DT34BBwBB02340.34 BB02
0344xzq_I_DT34_DA35BBBBB00790.26 BB00
0354xzq_I_DA35_DT36BBBBB00830.25 BB00
0364xzq_I_DT36_DT37BBBBB00830.27 BB00
0374xzq_I_DT37_DT38BBBBB00950.17 BB00
0384xzq_I_DT38_DG39BB2BB07790.33 BB07
0394xzq_I_DG39_DG40BBBBB00790.22 BB00
0404xzq_I_DG40_DA41BB2BB07940.24 BB07
0414xzq_I_DA41_DA42BBBBB00880.20 BB00
0424xzq_I_DA42_DA43BBBBB00720.28 BB00
0434xzq_I_DA43_DC44BBBBB00900.26 BB00
0444xzq_I_DC44_DT45BBBBB00840.24 BB00
0454xzq_I_DT45_DG46BB2BB07930.21 BB07
0464xzq_I_DG46_DC47BBBBB00770.21 BB00
0474xzq_I_DC47_DT48BB2BB07910.19 BB07
0484xzq_I_DT48_DC49BBBBB00880.24 BB00
0494xzq_I_DC49_DC50BB2BB07750.18 BB07
0504xzq_I_DC50_DA51BBBBB00830.24 BB00
0514xzq_I_DA51_DT52BBwBB02580.18 BB02
0524xzq_I_DT52_DC53NANNANT00.41 BB02
0534xzq_I_DC53_DA54BBBBB00710.37 BB00
0544xzq_I_DA54_DA55BBBBB00230.38 BB00
0554xzq_I_DA55_DA56BB2BB08480.49 BB08
0564xzq_I_DA56_DA57BBBBB00280.40 BB00
0574xzq_I_DA57_DG58BBBBB00490.29 BB00
0584xzq_I_DG58_DG59NANNANT00.55 BB07
0594xzq_I_DG59_DC60BBBBB00770.23 BB00
0604xzq_I_DC60_DA61B12BB04800.20 BB04
0614xzq_I_DA61_DT62BBBBB00780.20 BB00
0624xzq_I_DT62_DG63B12BB04870.18 BB04
0634xzq_I_DG63_DT64BBBBB00690.32 BB00
0644xzq_I_DT64_DT65BBBBB00910.21 BB00
0654xzq_I_DT65_DC66BBBBB00850.19 BB00
0664xzq_I_DC66_DA67BBBBB00620.18 BB00
0674xzq_I_DA67_DG68BB2BB07790.23 BB07
0684xzq_I_DG68_DC69BBBBB00830.19 BB00
0694xzq_I_DC69_DT70BB2BB07770.20 BB07
0704xzq_I_DT70_DG71BBBBB00580.34 BB00
0714xzq_I_DG71_DG72BBBBB00850.19 BB00
0724xzq_I_DG72_DA73B12BB04450.12 BB04
0734xzq_I_DA73_DA74BBBBB00980.10 BB00
0744xzq_I_DA74_DT75BBwBB02600.30 BB02
0754xzq_I_DT75_DC76BBBBB00900.15 BB00
0764xzq_I_DC76_DC77BBBBB00690.31 BB00
0774xzq_I_DC77_DA78BB2BB07730.24 BB07
0784xzq_I_DA78_DG79BBBBB00780.18 BB00
0794xzq_I_DG79_DC80BB2BB07930.27 BB07
0804xzq_I_DC80_DT81BBBBB00550.32 BB00
0814xzq_I_DT81_DG82B12BB04700.24 BB04
0824xzq_I_DG82_DA83BBBBB00940.16 BB00
0834xzq_I_DA83_DA84BBBBB00960.10 BB00
0844xzq_I_DA84_DC85BBBBB00790.23 BB00
0854xzq_I_DC85_DA86BBBBB00820.28 BB00
0864xzq_I_DA86_DT87BBBBB00920.15 BB00
0874xzq_I_DT87_DG88BBBBB00820.17 BB00
0884xzq_I_DG88_DC89BB2BB07730.28 BB07
0894xzq_I_DC89_DC90B12BB04640.44 BB04
0904xzq_I_DC90_DT91BB2BB07760.22 BB07
0914xzq_I_DT91_DT92BBBBB00920.12 BB00
0924xzq_I_DT92_DT93BBBBB00830.19 BB00
0934xzq_I_DT93_DT94BBBBB00830.20 BB00
0944xzq_I_DT94_DG95BBBBB00560.35 BB00
0954xzq_I_DG95_DA96miBBB10700.53 BB10
0964xzq_I_DA96_DT97BBBBB00590.40 BB00
0974xzq_I_DT97_DG98B12BB04910.18 BB04
0984xzq_I_DG98_DG99BBBBB00880.18 BB00
0994xzq_I_DG99_DA100BB2BB07900.32 BB07
1004xzq_I_DA100_DG101BBBBB00850.27 BB00
1014xzq_I_DG101_DC102BB2BB07830.18 BB07
1024xzq_I_DC102_DA103BBBBB00900.21 BB00
1034xzq_I_DA103_DG104B12BB04800.23 BB04
1044xzq_I_DG104_DT105BBBBB00900.22 BB00
1054xzq_I_DT105_DT106BBBBB00940.17 BB00
1064xzq_I_DT106_DT107BBBBB00830.20 BB00
1074xzq_I_DT107_DC108BBBBB00750.25 BB00
1084xzq_I_DC108_DC109BB2BB07630.36 BB07
1094xzq_I_DC109_DA110BB2BB07640.22 BB07
1104xzq_I_DA110_DA111BBBBB00910.12 BB00
1114xzq_I_DA111_DA112B12BB04830.17 BB04
1124xzq_I_DA112_DT113BBBBB00820.24 BB00
1134xzq_I_DT113_DA114BBBBB00860.22 BB00
1144xzq_I_DA114_DC115BBwBB02530.30 BB02
1154xzq_I_DC115_DA116BBBBB00650.30 BB00
1164xzq_I_DA116_DC117BBBBB00750.21 BB00
1174xzq_I_DC117_DT118BBBBB00840.27 BB00
1184xzq_I_DT118_DT119BBBBB00770.31 BB00
1194xzq_I_DT119_DT120BBBBB00840.23 BB00
1204xzq_I_DT120_DT121BBBBB00760.28 BB00
1214xzq_I_DT121_DG122B12BB04630.34 BB04
1224xzq_I_DG122_DG123BBBBB00840.24 BB00
1234xzq_I_DG123_DT124BBBBB00940.21 BB00
1244xzq_I_DT124_DA125BBwBB02890.16 BB02
1254xzq_I_DA125_DG126NANNANT00.41 BB02
1264xzq_I_DG126_DT127BBBBB00590.44 BB00
1274xzq_I_DT127_DA128BBBBB00790.30 BB00
1284xzq_I_DA128_DT129BBBBB00740.36 BB00
1294xzq_I_DT129_DC130BBBBB00830.26 BB00
1304xzq_I_DC130_DT131BBBBB00920.14 BB00
1314xzq_I_DT131_DG132BB2BB07940.24 BB07
1324xzq_I_DG132_DC133BBBBB00810.18 BB00
1334xzq_I_DC133_DA134BB2BB07880.16 BB07
1344xzq_I_DA134_DG135BBBBB00910.18 BB00
1354xzq_I_DG135_DG136BBBBB00750.32 BB00
1364xzq_I_DG136_DT137BBBBB00830.28 BB00
1374xzq_I_DT137_DG138BBwBB02930.15 BB02
1384xzq_I_DG138_DG139BBBBB00840.31 BB00
1394xzq_I_DG139_DA140BBBBB00700.35 BB00
1404xzq_I_DA140_DT141BBBBB00790.23 BB00
1414xzq_I_DT141_DA142BB2BB07750.22 BB07
1424xzq_I_DA142_DT143BBBBB00900.19 BB00
1434xzq_I_DT143_DT144BBBBB00930.13 BB00
1444xzq_I_DT144_DG145BBBBB00910.17 BB00
1454xzq_I_DG145_DA146B12BB04820.27 BB04
1464xzq_I_DA146_DT147BBwBB02860.16 BB02
1474xzq_J_DA148_DT149BBBBB00730.24 BB00
1484xzq_J_DT149_DC150BBBBB00810.28 BB00
1494xzq_J_DC150_DA151BB2BB07660.28 BB07
1504xzq_J_DA151_DA152BBBBB00950.15 BB00
1514xzq_J_DA152_DT153BBwBB02900.12 BB02
1524xzq_J_DT153_DA154BBBBB00710.33 BB00
1534xzq_J_DA154_DT155BBBBB00960.14 BB00
1544xzq_J_DT155_DC156BBBBB00590.19 BB00
1554xzq_J_DC156_DC157B12BB04440.25 BB04
1564xzq_J_DC157_DA158BBBBB00700.32 BB00
1574xzq_J_DA158_DC159BBBBB00820.21 BB00
1584xzq_J_DC159_DC160BBBBB00800.30 BB00
1594xzq_J_DC160_DT161BBBBB00650.20 BB00
1604xzq_J_DT161_DG162B12BB04780.26 BB04
1614xzq_J_DG162_DC163BBBBB00900.19 BB00
1624xzq_J_DC163_DA164BB2BB07770.33 BB07
1634xzq_J_DA164_DG165BBBBB00800.22 BB00
1644xzq_J_DG165_DA166B12BB04800.12 BB04
1654xzq_J_DA166_DT167BBBBB00780.26 BB00
1664xzq_J_DT167_DA168B12BB04830.25 BB04
1674xzq_J_DA168_DC169BBBBB00570.38 BB00
1684xzq_J_DC169_DT170BBBBB00500.31 BB00
1694xzq_J_DT170_DA171BBBBB00680.24 BB00
1704xzq_J_DA171_DC172BBBBB00860.26 BB00
1714xzq_J_DC172_DC173BBBBB00750.24 BB00
1724xzq_J_DC173_DA174BB2BB07780.30 BB07
1734xzq_J_DA174_DA175B12BB04620.28 BB04
1744xzq_J_DA175_DA176BBBBB00820.18 BB00
1754xzq_J_DA176_DA177B12BB04740.29 BB04
1764xzq_J_DA177_DG178B12BB04750.23 BB04
1774xzq_J_DG178_DT179BBBBB00780.22 BB00
1784xzq_J_DT179_DG180BBBBB00760.31 BB00
1794xzq_J_DG180_DT181BBBBB00270.38 BB00
1804xzq_J_DT181_DA182B12BB04730.16 BB04
1814xzq_J_DA182_DT183BBBBB00920.23 BB00
1824xzq_J_DT183_DT184BBBBB00770.27 BB00
1834xzq_J_DT184_DT185BBBBB00900.19 BB00
1844xzq_J_DT185_DG186BB2BB07760.29 BB07
1854xzq_J_DG186_DG187BBBBB00790.28 BB00
1864xzq_J_DG187_DA188BB2BB07890.33 BB07
1874xzq_J_DA188_DA189BBwBB02780.20 BB02
1884xzq_J_DA189_DA190BBBBB00800.28 BB00
1894xzq_J_DA190_DC191BBBBB00940.17 BB00
1904xzq_J_DC191_DT192BBBBB00770.22 BB00
1914xzq_J_DT192_DG193BB2BB07890.29 BB07
1924xzq_J_DG193_DC194BBBBB00870.23 BB00
1934xzq_J_DC194_DT195BB2BB07630.34 BB07
1944xzq_J_DT195_DC196BBBBB00770.31 BB00
1954xzq_J_DC196_DC197BB2BB07750.22 BB07
1964xzq_J_DC197_DA198BBBBB00900.19 BB00
1974xzq_J_DA198_DT199BBBBB00780.24 BB00
1984xzq_J_DT199_DC200B12BB04770.21 BB04
1994xzq_J_DC200_DA201BBBBB00450.33 BB00
2004xzq_J_DA201_DA202BBBBB00790.27 BB00
2014xzq_J_DA202_DA203BBBBB00770.31 BB00
2024xzq_J_DA203_DA204BBBBB00610.27 BB00
2034xzq_J_DA204_DG205B12BB04320.43 BB04
2044xzq_J_DG205_DG206BB2BB07770.34 BB07
2054xzq_J_DG206_DC207BBBBB00830.23 BB00
2064xzq_J_DC207_DA208B12BB04910.15 BB04
2074xzq_J_DA208_DT209BBBBB00950.13 BB00
2084xzq_J_DT209_DG210BBBBB00770.20 BB00
2094xzq_J_DG210_DT211BBBBB00780.29 BB00
2104xzq_J_DT211_DT212BBBBB00700.18 BB00
2114xzq_J_DT212_DC213BBBBB00920.17 BB00
2124xzq_J_DC213_DA214B12BB04760.27 BB04
2134xzq_J_DA214_DG215BB2BB07910.28 BB07
2144xzq_J_DG215_DC216BBBBB00860.19 BB00
2154xzq_J_DC216_DT217BB2BB07790.22 BB07
2164xzq_J_DT217_DG218BBBBB00640.29 BB00
2174xzq_J_DG218_DG219BBBBB00940.12 BB00
2184xzq_J_DG219_DA220BBBBB00820.19 BB00
2194xzq_J_DA220_DT221BBBBB00870.19 BB00
2204xzq_J_DT221_DT222B12BB04750.26 BB04
2214xzq_J_DT222_DC223B12BB04760.32 BB04
2224xzq_J_DC223_DC224BBBBB00760.27 BB00
2234xzq_J_DC224_DA225BB2BB07890.21 BB07
2244xzq_J_DA225_DG226BBBBB00840.17 BB00
2254xzq_J_DG226_DC227BB2BB07820.22 BB07
2264xzq_J_DC227_DT228B12BB04740.35 BB04
2274xzq_J_DT228_DG229B12BB04780.23 BB04
2284xzq_J_DG229_DA230BBBBB00900.16 BB00
2294xzq_J_DA230_DA231BBBBB00910.12 BB00
2304xzq_J_DA231_DC232BBwBB02260.36 BB02
2314xzq_J_DC232_DA233BBBBB00750.43 BB00
2324xzq_J_DA233_DT234BBwBB02800.16 BB02
2334xzq_J_DT234_DG235BBBBB00710.29 BB00
2344xzq_J_DG235_DC236BB2BB07740.33 BB07
2354xzq_J_DC236_DC237BBBBB00770.24 BB00
2364xzq_J_DC237_DT238BB2BB07740.26 BB07
2374xzq_J_DT238_DT239BBBBB00890.17 BB00
2384xzq_J_DT239_DT240B12BB04710.26 BB04
2394xzq_J_DT240_DT241NANNANT00.49 BB10
2404xzq_J_DT241_DG242NANNANT00.66 BB07
2414xzq_J_DG242_DA243BBBBB00560.25 BB00
2424xzq_J_DA243_DT244miBBB10650.53 BB10
2434xzq_J_DT244_DG245B12BB05690.50 BB05
2444xzq_J_DG245_DG246BBBBB00570.46 BB00
2454xzq_J_DG246_DA247BB2BB07910.26 BB07
2464xzq_J_DA247_DG248BBBBB00810.32 BB00
2474xzq_J_DG248_DC249BB2BB07950.21 BB07
2484xzq_J_DC249_DA250BBBBB00840.21 BB00
2494xzq_J_DA250_DG251BBBBB00630.37 BB00
2504xzq_J_DG251_DT252BBBBB00940.21 BB00
2514xzq_J_DT252_DT253B12BB04840.16 BB04
2524xzq_J_DT253_DT254BBwBB02880.15 BB02
2534xzq_J_DT254_DC255BBBBB00710.38 BB00
2544xzq_J_DC255_DC256BB2BB07850.17 BB07
2554xzq_J_DC256_DA257BB2BB07890.30 BB07
2564xzq_J_DA257_DA258BBBBB00880.14 BB00
2574xzq_J_DA258_DA259B12BB04830.10 BB04
2584xzq_J_DA259_DT260BBBBB00800.16 BB00
2594xzq_J_DT260_DA261BBBBB00920.20 BB00
2604xzq_J_DA261_DC262BBBBB00810.21 BB00
2614xzq_J_DC262_DA263BBBBB00780.17 BB00
2624xzq_J_DA263_DC264BBwBB02730.24 BB02
2634xzq_J_DC264_DT265BBBBB00740.24 BB00
2644xzq_J_DT265_DT266BBBBB00890.15 BB00
2654xzq_J_DT266_DT267BBBBB00870.26 BB00
2664xzq_J_DT267_DT268BBBBB00930.17 BB00
2674xzq_J_DT268_DG269B12BB04530.36 BB04
2684xzq_J_DG269_DG270BBBBB00800.25 BB00
2694xzq_J_DG270_DT271BBBBB00960.17 BB00
2704xzq_J_DT271_DA272B12BB04730.33 BB04
2714xzq_J_DA272_DG273BBBBB00930.18 BB00
2724xzq_J_DG273_DT274BBwBB02210.40 BB02
2734xzq_J_DT274_DA275BBwBB02680.30 BB02
2744xzq_J_DA275_DT276BBBBB00710.31 BB00
2754xzq_J_DT276_DC277BBwBB11870.20 BB11
2764xzq_J_DC277_DT278BBwBB16870.37 BB16
2774xzq_J_DT278_DG279BB2BB07940.20 BB07
2784xzq_J_DG279_DC280BBBBB00700.22 BB00
2794xzq_J_DC280_DA281BB2BB07960.22 BB07
2804xzq_J_DA281_DG282BBBBB00850.21 BB00
2814xzq_J_DG282_DG283B12BB04750.20 BB04
2824xzq_J_DG283_DT284BBBBB00840.22 BB00
2834xzq_J_DT284_DG285BBBBB00810.21 BB00
2844xzq_J_DG285_DG286B12BB04520.33 BB04
2854xzq_J_DG286_DA287BB2BB07710.24 BB07
2864xzq_J_DA287_DT288BBBBB00800.30 BB00
2874xzq_J_DT288_DA289BBBBB00910.20 BB00
2884xzq_J_DA289_DT290BBBBB00860.25 BB00
2894xzq_J_DT290_DT291BBBBB00910.17 BB00
2904xzq_J_DT291_DG292BBBBB00930.12 BB00
2914xzq_J_DG292_DA293B12BB04900.20 BB04
2924xzq_J_DA293_DT294BBwBB02810.20 BB02

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

Browse conformers

Return up to random steps in PDB structures ( include large structures )

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