DNATCO v4.1: results

Crystal structure of the ZMP riboswitch at 2.50 angstrom

Results of the assignment of 63 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	4xw7_A_G1_G2	AAA	AA00	93	0.08	AA00
02	4xw7_A_G2_G3	AAA	AA00	85	0.21	AA00
03	4xw7_A_G3_U4	AAA	AA00	95	0.12	AA00
04	4xw7_A_U4_C5	AAA	AA08	87	0.16	AA08
05	4xw7_A_C5_G6	AAw	AA01	86	0.14	AA01
06	4xw7_A_G6_U7	AAA	AA08	96	0.19	AA08
07	4xw7_A_U7_G8	AAA	AA00	50	0.37	AA00
08	4xw7_A_G8_A9	AAu	AA07	71	0.37	AA07
09	4xw7_A_A9_C10	AAA	AA08	27	0.59	AA08
10	4xw7_A_C10_U11	AAw	AA01	28	0.29	AA01
11	4xw7_A_U11_G12	OPN	OP01	15	0.70	OP01
12	4xw7_A_G12_G13	AAA	AA00	68	0.21	AA00
13	4xw7_A_G13_C14	AAA	AA00	97	0.11	AA00
14	4xw7_A_C14_G15	AAA	AA00	95	0.16	AA00
15	4xw7_A_G15_A16	NAN	NANT	0	1.71	OP11
16	4xw7_A_A16_A17	NAN	NANT	0	1.58	OP26
17	4xw7_A_A17_C18	NAN	NANT	0	0.56	AA01
18	4xw7_A_C18_A19	NAN	NANT	0	1.37	OP17
19	4xw7_A_A19_G20	OPN	OP24	94	0.14	OP24
20	4xw7_A_G20_G21	AAA	AA00	67	0.23	AA00
21	4xw7_A_G21_U22	AAA	AA00	86	0.10	AA00
22	4xw7_A_U22_G23	AAA	AA00	78	0.16	AA00
23	4xw7_A_G23_G24	AAw	AA01	89	0.16	AA01
24	4xw7_A_G24_G25	AAw	AA11	46	0.55	AA11
25	4xw7_A_G25_A26	NAN	NANT	0	0.38	AB05
26	4xw7_A_A26_A27	NAN	NANT	0	0.48	OP23
27	4xw7_A_A27_A28	B-A	BA01	22	0.32	BA01
28	4xw7_A_A28_C29	NAN	NANT	0	1.71	OP31
29	4xw7_A_C29_C30	AAA	AA00	57	0.27	AA00
30	4xw7_A_C30_A31	AAA	AA00	90	0.11	AA00
31	4xw7_A_A31_C32	AAA	AA00	86	0.12	AA00
32	4xw7_A_C32_C33	AAA	AA00	91	0.15	AA00
33	4xw7_A_C33_G34	AAA	AA00	76	0.19	AA00
34	4xw7_A_G34_G35	AAA	AA08	93	0.16	AA08
35	4xw7_A_G35_G36	AAw	AA01	81	0.23	AA01
36	4xw7_A_G36_G37	AAA	AA00	25	0.43	AA00
37	4xw7_A_G37_A38	AAu	AA07	77	0.30	AA07
38	4xw7_A_A38_G39	AAA	AA08	27	0.53	AA08
39	4xw7_A_G39_C40	AAA	AA00	84	0.17	AA00
40	4xw7_A_C40_G41	AAA	AA00	68	0.17	AA00
41	4xw7_A_G41_A42	AAA	AA08	77	0.22	AA08
42	4xw7_A_A42_C43	AAA	AA00	80	0.11	AA00
43	4xw7_A_C43_C44	AAA	AA00	85	0.18	AA00
44	4xw7_A_C44_C45	AAA	AA00	90	0.14	AA00
45	4xw7_A_C45_U46	AAA	AA00	78	0.28	AA00
46	4xw7_A_U46_U47	AAA	AA00	83	0.22	AA00
47	4xw7_A_U47_G48	AAw	AA06	70	0.19	AA06
48	4xw7_A_G48_C49	AAA	AA08	80	0.16	AA08
49	4xw7_A_C49_C50	AAA	AA00	37	0.36	AA00
50	4xw7_A_C50_G51	NAN	NANT	0	0.69	AB2S
51	4xw7_A_G51_C52	NAN	NANT	0	0.56	OPS1
52	4xw7_A_C52_C53	OPN	OP03	46	0.32	OP03
53	4xw7_A_C53_C54	AAA	AA00	76	0.27	AA00
54	4xw7_A_C54_G55	AAA	AA00	81	0.14	AA00
55	4xw7_A_G55_C56	AAA	AA00	90	0.14	AA00
56	4xw7_A_C56_C57	AAA	AA00	81	0.22	AA00
57	4xw7_A_C57_U58	AAA	AA00	93	0.13	AA00
58	4xw7_A_U58_G59	AAA	AA04	86	0.14	AA04
59	4xw7_A_G59_G60	AAA	AA08	69	0.33	AA08
60	4xw7_A_G60_G61	AAA	AA00	80	0.18	AA00
61	4xw7_A_G61_C62	AAA	AA00	84	0.20	AA00
62	4xw7_A_C62_A63	AAA	AA00	86	0.14	AA00
63	4xw7_A_A63_A64	AAA	AA00	97	0.11	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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N

Results of the assignment of 63 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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