DNATCO v4.1: results

Crystal structure of T. aquaticus transcription initiation complex with CarD containing upstream fork promoter.

Results of the assignment of 104 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	4xls_O_DC1_DT2	BBB	BB00	15	0.47	BB00
002	4xls_O_DT2_DT3	BBw	BB02	64	0.34	BB02
003	4xls_O_DT3_DG4	BBB	BB00	84	0.30	BB00
004	4xls_O_DG4_DA5	BBB	BB00	94	0.13	BB00
005	4xls_O_DA5_DC6	BBw	BB02	85	0.13	BB02
006	4xls_O_DC6_DA7	B12	BB04	75	0.24	BB04
007	4xls_O_DA7_DA8	B12	BB04	72	0.24	BB04
008	4xls_O_DA8_DA9	BBB	BB00	85	0.15	BB00
009	4xls_O_DA9_DA10	BBB	BB00	86	0.15	BB00
010	4xls_O_DA10_DG11	BBw	BB02	61	0.34	BB02
011	4xls_O_DG11_DT12	BBB	BB00	59	0.38	BB00
012	4xls_O_DT12_DG13	BBB	BB00	81	0.24	BB00
013	4xls_O_DG13_DT14	BBB	BB00	75	0.23	BB00
014	4xls_O_DT14_DT15	BBw	BB02	44	0.30	BB02
015	4xls_O_DT15_DA16	BBB	BB00	74	0.29	BB00
016	4xls_O_DA16_DA17	BBB	BB00	73	0.27	BB00
017	4xls_O_DA17_DA18	BBB	BB01	53	0.24	BB01
018	4xls_O_DA18_DT19	A-B	AB02	57	0.44	AB02
019	4xls_O_DT19_DT20	BBB	BB00	89	0.23	BB00
020	4xls_O_DT20_DG21	B12	BB04	81	0.18	BB04
021	4xls_O_DG21_DT22	BBw	BB02	63	0.23	BB02
022	4xls_O_DT22_DG23	BBB	BB00	73	0.31	BB00
023	4xls_O_DG23_DC24	miB	BB15	73	0.20	BB15
024	4xls_O_DC24_DT25	B12	BB04	68	0.30	BB04
025	4xls_O_DT25_DA26	NAN	NANT	0	2.02	ZZ02
026	4xls_O_DA26_DT27	NAN	NANT	0	0.91	OP14
027	4xls_O_DT27_DA28	BBB	BB00	60	0.43	BB00
028	4xls_O_DA28_DC29	BBB	BB00	88	0.24	BB00
029	4xls_O_DC29_DT30	OPN	OP20	67	0.60	OP20
030	4xls_P_DG2_DC3	miB	BB10	58	0.33	BB10
031	4xls_P_DC3_DA4	B12	BB04	58	0.29	BB04
032	4xls_P_DA4_DC5	BBB	BB00	75	0.30	BB00
033	4xls_P_DC5_DA6	BB2	BB07	70	0.21	BB07
034	4xls_P_DA6_DA7	BBB	BB00	70	0.25	BB00
035	4xls_P_DA7_DT8	BBB	BB00	80	0.20	BB00
036	4xls_P_DT8_DT9	B12	BB04	74	0.24	BB04
037	4xls_P_DT9_DT10	BBB	BB00	86	0.17	BB00
038	4xls_P_DT10_DA11	BB2	BB07	8	0.36	BB07
039	4xls_P_DA11_DA12	NAN	NANT	0	0.57	AB02
040	4xls_P_DA12_DC13	BBB	BB00	75	0.25	BB00
041	4xls_P_DC13_DA14	B12	BB04	78	0.28	BB04
042	4xls_P_DA14_DC15	BBB	BB00	84	0.27	BB00
043	4xls_P_DC15_DT16	B12	BB04	62	0.28	BB04
044	4xls_P_DT16_DT17	BBB	BB00	89	0.14	BB00
045	4xls_P_DT17_DT18	B12	BB04	73	0.21	BB04
046	4xls_P_DT18_DT19	BBB	BB00	55	0.29	BB00
047	4xls_P_DT19_DG20	B12	BB04	81	0.18	BB04
048	4xls_P_DG20_DT21	BBB	BB00	79	0.31	BB00
049	4xls_P_DT21_DC22	B12	BB04	78	0.27	BB04
050	4xls_P_DC22_DA23	B12	BB04	74	0.31	BB04
051	4xls_P_DA23_DA24	BBB	BB00	89	0.13	BB00
052	4xls_P_DA24_DG25	NAN	NANT	0	0.45	BB00
053	4xls_R_DC1_DT2	BBB	BB00	39	0.45	BB00
054	4xls_R_DT2_DT3	BBw	BB02	58	0.32	BB02
055	4xls_R_DT3_DG4	BBB	BB00	79	0.28	BB00
056	4xls_R_DG4_DA5	BBB	BB00	92	0.14	BB00
057	4xls_R_DA5_DC6	BBw	BB02	88	0.10	BB02
058	4xls_R_DC6_DA7	B12	BB04	77	0.25	BB04
059	4xls_R_DA7_DA8	B12	BB04	76	0.22	BB04
060	4xls_R_DA8_DA9	BBB	BB00	86	0.16	BB00
061	4xls_R_DA9_DA10	BBB	BB00	87	0.14	BB00
062	4xls_R_DA10_DG11	BBw	BB02	60	0.39	BB02
063	4xls_R_DG11_DT12	BBB	BB00	57	0.40	BB00
064	4xls_R_DT12_DG13	BBB	BB00	81	0.24	BB00
065	4xls_R_DG13_DT14	BBB	BB00	76	0.24	BB00
066	4xls_R_DT14_DT15	BBw	BB02	51	0.30	BB02
067	4xls_R_DT15_DA16	BBB	BB00	73	0.30	BB00
068	4xls_R_DA16_DA17	BBB	BB00	71	0.28	BB00
069	4xls_R_DA17_DA18	BBB	BB01	50	0.26	BB01
070	4xls_R_DA18_DT19	A-B	AB02	53	0.44	AB02
071	4xls_R_DT19_DT20	BBB	BB00	89	0.22	BB00
072	4xls_R_DT20_DG21	B12	BB04	82	0.18	BB04
073	4xls_R_DG21_DT22	BBw	BB02	71	0.22	BB02
074	4xls_R_DT22_DG23	BBB	BB00	72	0.28	BB00
075	4xls_R_DG23_DC24	miB	BB15	74	0.22	BB15
076	4xls_R_DC24_DT25	B12	BB04	66	0.36	BB04
077	4xls_R_DT25_DA26	NAN	NANT	0	2.05	ZZ02
078	4xls_R_DA26_DT27	NAN	NANT	0	0.97	OP14
079	4xls_R_DT27_DA28	BBB	BB00	59	0.39	BB00
080	4xls_R_DA28_DC29	BBB	BB00	87	0.28	BB00
081	4xls_R_DC29_DT30	OPN	OP20	69	0.60	OP20
082	4xls_S_DG2_DC3	miB	BB10	65	0.30	BB10
083	4xls_S_DC3_DA4	B12	BB04	52	0.34	BB04
084	4xls_S_DA4_DC5	BBB	BB00	76	0.28	BB00
085	4xls_S_DC5_DA6	BB2	BB07	72	0.21	BB07
086	4xls_S_DA6_DA7	BBB	BB00	70	0.26	BB00
087	4xls_S_DA7_DT8	BBB	BB00	76	0.21	BB00
088	4xls_S_DT8_DT9	B12	BB04	77	0.20	BB04
089	4xls_S_DT9_DT10	BBB	BB00	80	0.20	BB00
090	4xls_S_DT10_DA11	BB2	BB07	9	0.38	BB07
091	4xls_S_DA11_DA12	NAN	NANT	0	0.57	AB02
092	4xls_S_DA12_DC13	BBB	BB00	73	0.24	BB00
093	4xls_S_DC13_DA14	B12	BB04	79	0.26	BB04
094	4xls_S_DA14_DC15	BBB	BB00	81	0.27	BB00
095	4xls_S_DC15_DT16	B12	BB04	58	0.31	BB04
096	4xls_S_DT16_DT17	BBB	BB00	89	0.14	BB00
097	4xls_S_DT17_DT18	B12	BB04	72	0.22	BB04
098	4xls_S_DT18_DT19	BBB	BB00	56	0.28	BB00
099	4xls_S_DT19_DG20	B12	BB04	82	0.21	BB04
100	4xls_S_DG20_DT21	BBB	BB00	81	0.28	BB00
101	4xls_S_DT21_DC22	B12	BB04	84	0.23	BB04
102	4xls_S_DC22_DA23	BBB	BB00	64	0.23	BB00
103	4xls_S_DA23_DA24	BBB	BB00	86	0.25	BB00
104	4xls_S_DA24_DG25	NAN	NANT	0	0.56	BB12

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 104 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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