DNATCO v4.1: results

Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCACCA

Results of the assignment of 94 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	4x4t_B_G1_G2	AAA	AA00	80	0.15	AA00
02	4x4t_B_G2_C3	AAA	AA00	97	0.10	AA00
03	4x4t_B_C3_C4	AAA	AA00	91	0.16	AA00
04	4x4t_B_C4_G5	AAA	AA00	92	0.12	AA00
05	4x4t_B_G5_C6	AAw	AA06	59	0.21	AA06
06	4x4t_B_C6_G7	AAA	AA00	51	0.29	AA00
07	4x4t_B_G7_G8	AAA	AA00	80	0.15	AA00
08	4x4t_B_G8_C9	AAA	AA00	75	0.15	AA00
09	4x4t_B_C9_A10	AAA	AA00	83	0.14	AA00
10	4x4t_B_A10_G11	AAw	AA01	67	0.24	AA01
11	4x4t_B_G11_G12	AAA	AA00	77	0.15	AA00
12	4x4t_B_G12_5BU13	AAA	AA00	77	0.23	AA00
13	4x4t_B_5BU13_U14	AAA	AA00	55	0.38	AA00
14	4x4t_B_U14_C15	OPN	OP04	86	0.15	OP04
15	4x4t_B_C15_G16	AAA	AA00	75	0.28	AA00
16	4x4t_B_G16_A17	ICL	IC04	81	0.22	IC04
17	4x4t_B_A17_A18	NAN	NANT	0	0.66	OP25
18	4x4t_B_A18_U19	NAN	NANT	0	0.40	AAS1
19	4x4t_B_U19_C20	NAN	NANT	0	0.35	OP12
20	4x4t_B_C20_C21	AAw	AA06	70	0.32	AA06
21	4x4t_B_C21_5BU22	AAA	AA00	30	0.35	AA00
22	4x4t_B_5BU22_G23	AAA	AA00	86	0.17	AA00
23	4x4t_B_G23_C24	AAA	AA00	93	0.11	AA00
24	4x4t_B_C24_C25	AAw	AA01	47	0.23	AA01
25	4x4t_B_C25_G26	AAA	AA00	63	0.26	AA00
26	4x4t_B_G26_C27	AAA	AA00	91	0.15	AA00
27	4x4t_B_C27_G28	AAw	AA01	13	0.28	AA01
28	4x4t_B_G28_A.B29	AAA	AA00	75	0.16	AA00
29	4x4t_B_A.B29_5BU.B30	AAA	AA00	58	0.17	AA00
30	4x4t_B_5BU.B30_C.B31	AAA	AA00	61	0.21	AA00
31	4x4t_B_G.A32_C.A33	AAA	AA00	81	0.20	AA00
32	4x4t_B_C.A33_C.A34	AAA	AA00	91	0.17	AA00
33	4x4t_D_G1_G2	NAN	NANT	0	0.38	AA06
34	4x4t_D_G2_C3	AAA	AA08	92	0.10	AA08
35	4x4t_D_C3_C4	AAA	AA00	95	0.13	AA00
36	4x4t_D_C4_G5	AAA	AA00	92	0.15	AA00
37	4x4t_D_G5_C6	AAA	AA00	95	0.14	AA00
38	4x4t_D_C6_G7	AAw	AA01	49	0.28	AA01
39	4x4t_D_G7_G8	AAA	AA08	70	0.23	AA08
40	4x4t_D_G8_C9	AAA	AA00	93	0.15	AA00
41	4x4t_D_C9_A10	AAA	AA00	85	0.17	AA00
42	4x4t_D_A10_G11	AAw	AA01	70	0.26	AA01
43	4x4t_D_G11_G12	AAw	AA01	26	0.32	AA01
44	4x4t_D_G12_5BU13	AAA	AA08	41	0.33	AA08
45	4x4t_D_5BU13_U14	AAA	AA08	85	0.18	AA08
46	4x4t_D_U14_C15	OPN	OP04	82	0.22	OP04
47	4x4t_D_C15_G16	AAA	AA08	82	0.14	AA08
48	4x4t_D_G16_A17	AAw	AA01	74	0.23	AA01
49	4x4t_D_U19_C20	AAA	AA00	80	0.31	AA00
50	4x4t_D_C20_C21	AAw	AA01	22	0.35	AA01
51	4x4t_D_C21_5BU22	NAN	NANT	0	0.77	AA11
52	4x4t_D_5BU22_G23	AAA	AA08	81	0.23	AA08
53	4x4t_D_G23_C24	AAA	AA00	85	0.17	AA00
54	4x4t_D_C24_C25	AAA	AA00	60	0.26	AA00
55	4x4t_D_C25_G26	NAN	NANT	0	0.53	AA01
56	4x4t_D_G26_C27	AAA	AA04	81	0.24	AA04
57	4x4t_D_C27_G28	AAA	AA00	82	0.21	AA00
58	4x4t_D_G28_G32	AAA	AA00	86	0.20	AA00
59	4x4t_D_G32_C33	AAA	AA00	97	0.14	AA00
60	4x4t_D_C33_C34	AAA	AA00	57	0.28	AA00
61	4x4t_G_G.A1_G.A2	AAA	AA08	78	0.21	AA08
62	4x4t_G_G.B1_G.B2	AAA	AA00	87	0.14	AA00
63	4x4t_G_G.A2_C.A3	AAA	AA00	91	0.10	AA00
64	4x4t_G_G.B2_C.B3	AAw	AA01	61	0.24	AA01
65	4x4t_G_C.A3_C.A4	AAA	AA00	89	0.12	AA00
66	4x4t_G_C.B3_C.B4	AAA	AA08	89	0.09	AA08
67	4x4t_G_C.A4_G.A5	AAA	AA04	91	0.15	AA04
68	4x4t_G_C.B4_G.B5	AAA	AA00	73	0.18	AA00
69	4x4t_G_G.A5_C.A6	AAA	AA00	91	0.12	AA00
70	4x4t_G_G.B5_C.B6	NAN	NANT	0	0.35	AA06
71	4x4t_G_C.A6_G.A7	AAA	AA00	95	0.18	AA00
72	4x4t_G_C.B6_G.B7	AAA	AA04	80	0.31	AA04
73	4x4t_G_G.A7_G.A8	AAA	AA00	70	0.18	AA00
74	4x4t_G_G.B7_G.B8	AAA	AA00	93	0.16	AA00
75	4x4t_G_G.A8_C.A9	AAA	AA00	62	0.18	AA00
76	4x4t_G_G.B8_C.B9	AAA	AA00	83	0.20	AA00
77	4x4t_G_G.A23_C.A24	AAA	AA00	82	0.18	AA00
78	4x4t_G_G.B23_C.B24	AAA	AA00	85	0.13	AA00
79	4x4t_G_C.A24_C.A25	AAw	AA01	72	0.18	AA01
80	4x4t_G_C.B24_C.B25	AAA	AA00	75	0.20	AA00
81	4x4t_G_C.A25_G.A26	AAA	AA00	78	0.17	AA00
82	4x4t_G_C.B25_G.B26	NAN	NANT	0	0.43	AA10
83	4x4t_G_G.A26_C.A27	AAA	AA00	75	0.14	AA00
84	4x4t_G_G.B26_C.B27	NAN	NANT	0	0.38	AA01
85	4x4t_G_C.A27_G.A28	NAN	NANT	0	0.33	AA06
86	4x4t_G_C.B27_G.B28	AAA	AA00	34	0.38	AA00
87	4x4t_G_G.A28_A.A29	AAA	AA00	59	0.24	AA00
88	4x4t_G_G.B28_G.B29	NAN	NANT	0	0.42	AA01
89	4x4t_G_A.A29_5BU.A30	AAA	AA00	90	0.15	AA00
90	4x4t_G_G.B29_C.B30	AAA	AA08	71	0.31	AA08
91	4x4t_G_5BU.A30_C.A31	AAA	AA00	72	0.23	AA00
92	4x4t_G_C.B30_C.B31	AAA	AA00	43	0.30	AA00
93	4x4t_H_C1_G2	A-B	AB05	81	0.28	AB05
94	4x4t_I_G1_G2	NAN	NANT	0	0.92	AA03

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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Results of the assignment of 94 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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