DNATCO v4.1: results

Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCAC

Results of the assignment of 112 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	4x4p_B_G1_G2	AAA	AA00	70	0.20	AA00
002	4x4p_B_G2_C3	AAA	AA00	87	0.15	AA00
003	4x4p_B_C3_C4	AAA	AA08	84	0.18	AA08
004	4x4p_B_C4_G5	AAA	AA00	86	0.19	AA00
005	4x4p_B_G5_C6	AAw	AA06	70	0.25	AA06
006	4x4p_B_C6_G7	AAA	AA08	49	0.24	AA08
007	4x4p_B_G7_G8	AAA	AA00	78	0.15	AA00
008	4x4p_B_G8_C9	AAA	AA00	86	0.17	AA00
009	4x4p_B_C9_A10	AAA	AA00	86	0.14	AA00
010	4x4p_B_A10_G11	AAw	AA06	59	0.24	AA06
011	4x4p_B_G11_G12	AAA	AA08	5	0.43	AA08
012	4x4p_B_G12_U13	AAA	AA00	70	0.24	AA00
013	4x4p_B_U13_U14	AAA	AA08	66	0.28	AA08
014	4x4p_B_U14_C15	OPN	OP04	63	0.27	OP04
015	4x4p_B_C15_G16	AAA	AA00	23	0.46	AA00
016	4x4p_B_G16_A17	NAN	NANT	0	0.35	AA11
017	4x4p_B_A17_G18	NAN	NANT	0	1.52	OP02
018	4x4p_B_G18_U19	NAN	NANT	0	1.03	AA10
019	4x4p_B_U19_C20	NAN	NANT	0	0.64	OPS1
020	4x4p_B_C20_C21	AAA	AA00	27	0.41	AA00
021	4x4p_B_C21_U22	AAA	AA08	83	0.26	AA08
022	4x4p_B_U22_G23	AAA	AA08	19	0.46	AA08
023	4x4p_B_G23_C24	AAA	AA08	90	0.22	AA08
024	4x4p_B_C24_C25	AAA	AA08	61	0.31	AA08
025	4x4p_B_C25_G26	AAA	AA00	56	0.24	AA00
026	4x4p_B_G26_C27	AAA	AA00	74	0.16	AA00
027	4x4p_B_C27_G28	NAN	NANT	0	0.54	AA11
028	4x4p_B_G28_A29	NAN	NANT	0	2.53	OP16
029	4x4p_B_A29_U30	NAN	NANT	0	1.27	OP31
030	4x4p_B_U30_C31	NAN	NANT	0	1.29	BB1S
031	4x4p_B_C31_G32	NAN	NANT	0	1.44	OP03
032	4x4p_B_G32_C33	AAA	AA00	81	0.26	AA00
033	4x4p_B_C33_C34	AAA	AA00	70	0.26	AA00
034	4x4p_B_C34_A35	NAN	NANT	0	0.53	BB2S
035	4x4p_B_A35_C36	NAN	NANT	0	1.24	OP19
036	4x4p_D_G1_G2	AAA	AA00	94	0.11	AA00
037	4x4p_D_G2_C3	AAA	AA00	51	0.19	AA00
038	4x4p_D_C3_C4	AAA	AA00	80	0.17	AA00
039	4x4p_D_C4_G5	AAA	AA00	87	0.17	AA00
040	4x4p_D_G5_C6	AAA	AA00	73	0.23	AA00
041	4x4p_D_C6_G7	AAA	AA08	68	0.22	AA08
042	4x4p_D_G7_G8	AAw	AA10	51	0.21	AA10
043	4x4p_D_G8_C9	AAA	AA00	13	0.42	AA00
044	4x4p_D_C9_A10	AAw	AA01	76	0.20	AA01
045	4x4p_D_A10_G11	AAw	AA05	13	0.68	AA05
046	4x4p_D_G11_G12	NAN	NANT	0	0.63	AA12
047	4x4p_D_G12_U13	AAA	AA00	87	0.23	AA00
048	4x4p_D_U13_U14	AAA	AA08	80	0.22	AA08
049	4x4p_D_U14_C15	OPN	OP04	86	0.17	OP04
050	4x4p_D_C15_G16	AAA	AA08	89	0.22	AA08
051	4x4p_D_G16_A17	AAA	AA00	41	0.35	AA00
052	4x4p_D_U19_C20	AAA	AA08	39	0.37	AA08
053	4x4p_D_C20_C21	AAw	AA06	21	0.44	AA06
054	4x4p_D_C21_U22	AAA	AA08	87	0.20	AA08
055	4x4p_D_U22_G23	AAA	AA08	73	0.21	AA08
056	4x4p_D_G23_C24	AAA	AA00	61	0.29	AA00
057	4x4p_D_C24_C25	AAA	AA00	62	0.25	AA00
058	4x4p_D_C25_G26	AAA	AA08	12	0.36	AA08
059	4x4p_D_G26_C27	AAA	AA08	52	0.38	AA08
060	4x4p_D_G32_C33	AAA	AA04	79	0.32	AA04
061	4x4p_D_C33_C34	AAA	AA00	23	0.29	AA00
062	4x4p_D_C34_A35	AAA	AA09	39	0.33	AA09
063	4x4p_F_G1_G2	AAA	AA00	79	0.24	AA00
064	4x4p_F_G2_C3	AAA	AA04	90	0.16	AA04
065	4x4p_F_C3_C4	AAA	AA00	88	0.23	AA00
066	4x4p_F_C4_G5	AAA	AA00	85	0.23	AA00
067	4x4p_F_G5_C6	AAA	AA08	76	0.19	AA08
068	4x4p_F_C6_G7	AAA	AA08	66	0.23	AA08
069	4x4p_F_G7_G8	AAA	AA00	47	0.32	AA00
070	4x4p_F_G8_C9	AAA	AA00	85	0.18	AA00
071	4x4p_F_C9_A10	AAA	AA00	68	0.21	AA00
072	4x4p_F_A10_G11	AAw	AA06	41	0.28	AA06
073	4x4p_F_G11_G12	AAA	AA00	52	0.29	AA00
074	4x4p_F_G12_U13	AAA	AA00	87	0.12	AA00
075	4x4p_F_U13_U14	AAA	AA00	49	0.41	AA00
076	4x4p_F_U14_C15	OPN	OP04	57	0.26	OP04
077	4x4p_F_C15_G16	AAA	AA00	55	0.36	AA00
078	4x4p_F_G16_A17	AAA	AA04	74	0.40	AA04
079	4x4p_F_A17_G18	NAN	NANT	0	0.87	AA07
080	4x4p_F_G18_U19	NAN	NANT	0	1.22	AB04
081	4x4p_F_U19_C20	AAA	AA00	18	0.25	AA00
082	4x4p_F_C20_C21	AAw	AA01	31	0.42	AA01
083	4x4p_F_C21_U22	NAN	NANT	0	0.54	AA00
084	4x4p_F_U22_G23	AAA	AA08	70	0.31	AA08
085	4x4p_F_G32_C33	AAA	AA08	41	0.35	AA08
086	4x4p_F_C33_C34	AAA	AA00	81	0.20	AA00
087	4x4p_F_C34_A35	AAw	AA01	62	0.31	AA01
088	4x4p_H_G1_G2	AAA	AA08	81	0.21	AA08
089	4x4p_H_G2_C3	AAA	AA00	62	0.10	AA00
090	4x4p_H_C3_C4	AAA	AA00	80	0.29	AA00
091	4x4p_H_C4_G5	AAA	AA00	88	0.15	AA00
092	4x4p_H_G5_C6	AAA	AA00	79	0.27	AA00
093	4x4p_H_C6_G7	AAA	AA00	69	0.31	AA00
094	4x4p_H_G7_G8	NAN	NANT	0	0.32	AA06
095	4x4p_H_G8_C9	AAA	AA00	14	0.40	AA00
096	4x4p_H_C9_A10	AAA	AA00	59	0.15	AA00
097	4x4p_H_A10_G11	AAA	AA04	83	0.20	AA04
098	4x4p_H_G11_G12	AAA	AA00	10	0.41	AA00
099	4x4p_H_G12_U13	AAA	AA00	85	0.23	AA00
100	4x4p_H_U13_U14	AAA	AA00	32	0.43	AA00
101	4x4p_H_U14_C15	OPN	OP04	67	0.30	OP04
102	4x4p_H_C15_G16	AAA	AA08	65	0.39	AA08
103	4x4p_H_G16_A17	AAw	AA10	77	0.43	AA10
104	4x4p_H_U19_C20	NAN	NANT	0	0.79	AA04
105	4x4p_H_C20_C21	AAw	AA10	20	0.48	AA10
106	4x4p_H_C21_U22	AAA	AA00	69	0.25	AA00
107	4x4p_H_U22_G23	AAA	AA00	76	0.15	AA00
108	4x4p_H_G23_C24	AAw	AA01	63	0.25	AA01
109	4x4p_H_C24_C25	AAu	AA12	38	0.55	AA12
110	4x4p_H_G32_C33	AAA	AA00	18	0.37	AA00
111	4x4p_H_C33_C34	AAA	AA00	85	0.18	AA00
112	4x4p_H_C34_A35	AAw	AA01	25	0.42	AA01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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B

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N

Results of the assignment of 112 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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