DNATCO v4.1: results

Thermus thermophilus RNA polymerase backtracked complex

Results of the assignment of 113 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	4wqs_G_DT2_DC3	NAN	NANT	0	0.51	BB16
002	4wqs_G_DC3_DA4	NAN	NANT	0	0.43	BB15
003	4wqs_G_DA4_DC5	NAN	NANT	0	0.76	BB00
004	4wqs_G_DC5_DT6	NAN	NANT	0	0.57	BB12
005	4wqs_G_DT6_DA7	NAN	NANT	0	0.49	BB17
006	4wqs_G_DA7_DC8	BBB	BB00	52	0.32	BB00
007	4wqs_G_DC8_DC9	BBB	BB00	36	0.58	BB00
008	4wqs_G_DC9_DA10	BBB	BB00	71	0.31	BB00
009	4wqs_G_DA10_DC11	NAN	NANT	0	0.39	BB15
010	4wqs_G_DC11_DA12	B12	BB04	43	0.33	BB04
011	4wqs_G_DA12_DA13	BBB	BB00	24	0.29	BB00
012	4wqs_G_DA13_DG14	BBB	BB00	25	0.56	BB00
013	4wqs_G_DG14_DC15	BBB	BB00	39	0.52	BB00
014	4wqs_G_DC15_DT16	BBB	BB00	40	0.36	BB00
015	4wqs_G_DT16_DA17	NAN	NANT	0	0.72	BB13
016	4wqs_G_DA17_DC18	NAN	NANT	0	0.64	BB16
017	4wqs_G_DC18_DG19	NAN	NANT	0	1.53	OP05
018	4wqs_G_DG19_DC20	NAN	NANT	0	0.54	BB17
019	4wqs_G_DC20_DG21	NAN	NANT	0	0.39	BA05
020	4wqs_G_DG21_DA22	NAN	NANT	0	0.55	AA04
021	4wqs_G_DA22_DG23	NAN	NANT	0	0.57	BA05
022	4wqs_G_DG23_DC24	NAN	NANT	0	0.58	BB17
023	4wqs_G_DC24_DG25	AAA	AA02	35	0.37	AA02
024	4wqs_G_DG25_DC26	NAN	NANT	0	0.53	BA05
025	4wqs_G_DC26_DC27	NAN	NANT	0	0.43	AB04
026	4wqs_G_DC27_DG28	NAN	NANT	0	0.89	BB17
027	4wqs_H_C1_C2	AAw	AA01	60	0.40	AA01
028	4wqs_H_C2_A3	NAN	NANT	0	0.43	AA01
029	4wqs_H_A3_G4	NAN	NANT	0	0.79	AA06
030	4wqs_H_G4_C5	AAA	AA04	36	0.71	AA04
031	4wqs_H_C5_C6	NAN	NANT	0	1.23	OP01
032	4wqs_H_C6_G7	AAA	AA08	50	0.52	AA08
033	4wqs_H_G7_G8	AAA	AA00	57	0.44	AA00
034	4wqs_H_G8_C9	AAA	AA00	21	0.24	AA00
035	4wqs_H_C9_G10	AAA	AA08	8	0.51	AA08
036	4wqs_H_G10_C11	NAN	NANT	0	0.52	AA04
037	4wqs_H_C11_U12	AAA	AA00	36	0.37	AA00
038	4wqs_H_U12_C13	AAA	AA00	65	0.27	AA00
039	4wqs_H_C13_G14	AAA	AA08	66	0.37	AA08
040	4wqs_H_G14_C15	NAN	NANT	0	0.42	AA03
041	4wqs_H_C15_A16	NAN	NANT	0	1.21	IC07
042	4wqs_I_DG1_DT2	NAN	NANT	0	0.52	BB10
043	4wqs_I_DT2_DA3	BBB	BB00	13	0.37	BB00
044	4wqs_I_DA3_DG4	BBB	BB00	38	0.51	BB00
045	4wqs_I_DG4_DC5	BBB	BB00	9	0.67	BB00
046	4wqs_I_DC5_DT6	NAN	NANT	0	0.51	BB00
047	4wqs_I_DT6_DT7	BBB	BB00	10	0.53	BB00
048	4wqs_I_DT7_DG8	BBB	BB00	50	0.33	BB00
049	4wqs_I_DG8_DT9	BBB	BB00	51	0.34	BB00
050	4wqs_I_DT9_DG10	B12	BB04	50	0.28	BB04
051	4wqs_I_DG10_DG11	BBB	BB00	37	0.46	BB00
052	4wqs_I_DG11_DT12	BBB	BB00	62	0.38	BB00
053	4wqs_I_DT12_DA13	BBw	BB11	54	0.35	BB11
054	4wqs_I_DA13_DG14	NAN	NANT	0	0.51	BB02
055	4wqs_I_DG14_DT15	BBB	BB00	66	0.30	BB00
056	4wqs_I_DT15_DG16	B12	BB04	40	0.38	BB04
057	4wqs_I_DG16_DA17	B12	BB04	8	0.49	BB04
058	4wqs_X_DT2_DC3	BBw	BB16	31	0.56	BB16
059	4wqs_X_DC3_DA4	BBB	BB00	57	0.35	BB00
060	4wqs_X_DA4_DC5	BBw	BB02	9	0.58	BB02
061	4wqs_X_DC5_DT6	NAN	NANT	0	0.42	BB13
062	4wqs_X_DT6_DA7	NAN	NANT	0	0.85	BB13
063	4wqs_X_DA7_DC8	BBw	BB16	44	0.49	BB16
064	4wqs_X_DC8_DC9	B12	BB04	46	0.34	BB04
065	4wqs_X_DC9_DA10	BBB	BB00	15	0.29	BB00
066	4wqs_X_DA10_DC11	BBB	BB00	27	0.38	BB00
067	4wqs_X_DC11_DA12	BBB	BB00	25	0.48	BB00
068	4wqs_X_DA12_DA13	BBB	BB00	31	0.43	BB00
069	4wqs_X_DA13_DG14	BBB	BB00	39	0.29	BB00
070	4wqs_X_DG14_DC15	BBB	BB00	21	0.67	BB00
071	4wqs_X_DC15_DT16	BBB	BB00	21	0.52	BB00
072	4wqs_X_DT16_DA17	BBB	BB00	57	0.29	BB00
073	4wqs_X_DA17_DC18	NAN	NANT	0	0.53	BB00
074	4wqs_X_DC18_DG19	NAN	NANT	0	1.97	OP21
075	4wqs_X_DG19_DC20	AAA	AA02	14	0.62	AA02
076	4wqs_X_DC20_DG21	NAN	NANT	0	0.42	BA05
077	4wqs_X_DG21_DA22	NAN	NANT	0	0.58	AA01
078	4wqs_X_DA22_DG23	NAN	NANT	0	0.47	AA03
079	4wqs_X_DG23_DC24	NAN	NANT	0	0.39	BA05
080	4wqs_X_DC24_DG25	AAA	AA00	7	0.41	AA00
081	4wqs_X_DG25_DC26	NAN	NANT	0	0.53	AA04
082	4wqs_X_DC26_DC27	NAN	NANT	0	0.75	BB17
083	4wqs_X_DC27_DG28	AAA	AA02	38	0.37	AA02
084	4wqs_Y_C1_C2	AAA	AA04	20	0.58	AA04
085	4wqs_Y_C2_A3	NAN	NANT	0	0.96	AA04
086	4wqs_Y_A3_G4	NAN	NANT	0	0.48	AA07
087	4wqs_Y_G4_C5	NAN	NANT	0	0.53	AA04
088	4wqs_Y_C5_C6	NAN	NANT	0	1.59	OP01
089	4wqs_Y_C6_G7	NAN	NANT	0	0.68	AA08
090	4wqs_Y_G7_G8	NAN	NANT	0	0.70	AB04
091	4wqs_Y_G8_C9	AAA	AA04	33	0.41	AA04
092	4wqs_Y_C9_G10	AAA	AA00	10	0.43	AA00
093	4wqs_Y_G10_C11	AAA	AA00	26	0.33	AA00
094	4wqs_Y_C11_U12	AAA	AA00	59	0.21	AA00
095	4wqs_Y_U12_C13	AAu	AA12	43	0.44	AA12
096	4wqs_Y_C13_G14	AAA	AA00	42	0.33	AA00
097	4wqs_Y_G14_C15	AAA	AA00	29	0.40	AA00
098	4wqs_Z_DG1_DT2	NAN	NANT	0	0.59	BB10
099	4wqs_Z_DT2_DA3	BBB	BB00	41	0.39	BB00
100	4wqs_Z_DA3_DG4	BBB	BB00	42	0.42	BB00
101	4wqs_Z_DG4_DC5	BBB	BB00	39	0.34	BB00
102	4wqs_Z_DC5_DT6	BBB	BB00	38	0.39	BB00
103	4wqs_Z_DT6_DT7	BBB	BB00	62	0.33	BB00
104	4wqs_Z_DT7_DG8	BBB	BB00	78	0.39	BB00
105	4wqs_Z_DG8_DT9	BBB	BB00	43	0.45	BB00
106	4wqs_Z_DT9_DG10	BBB	BB00	53	0.39	BB00
107	4wqs_Z_DG10_DG11	miB	BB10	51	0.32	BB10
108	4wqs_Z_DG11_DT12	BBB	BB00	23	0.71	BB00
109	4wqs_Z_DT12_DA13	NAN	NANT	0	0.73	BB00
110	4wqs_Z_DA13_DG14	NAN	NANT	0	0.63	BB17
111	4wqs_Z_DG14_DT15	miB	BB15	13	0.43	BB15
112	4wqs_Z_DT15_DG16	BBB	BB00	58	0.24	BB00
113	4wqs_Z_DG16_DA17	BBB	BB00	21	0.48	BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Browse conformers

Show

Color by conformation group (pyramids)

Color by NtC (balls)

A-B

B-A

IC

OPN

Z

N

Results of the assignment of 113 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Download

Restraints

User-based restraints

Definitions

Download the papers

Browse conformers

Show

group
visible