DNATCO v4.1: results

Two distinct conformational states of GlyRS captured in crystal lattice

Results of the assignment of 68 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	4qei_C_GTP1_C2	AAA	AA08	15	0.41	AA08
02	4qei_C_C2_G3	AAA	AA00	84	0.19	AA00
03	4qei_C_G3_C4	AAA	AA00	74	0.22	AA00
04	4qei_C_C4_C5	AAA	AA08	39	0.44	AA08
05	4qei_C_C5_G6	AAw	AA01	81	0.22	AA01
06	4qei_C_G6_C7	A-B	AB05	67	0.21	AB05
07	4qei_C_C7_U8	OPN	OP11	74	0.38	OP11
08	4qei_C_U8_G9	NAN	NANT	0	1.06	IC03
09	4qei_C_G9_G10	NAN	NANT	0	1.05	OP12
10	4qei_C_G10_U11	AAA	AA00	44	0.26	AA00
11	4qei_C_U11_G12	AAA	AA08	77	0.16	AA08
12	4qei_C_G12_U13	AAw	AA01	83	0.14	AA01
13	4qei_C_U13_A14	AAu	AA12	71	0.39	AA12
14	4qei_C_A14_G15	AAA	AA08	79	0.31	AA08
15	4qei_C_G15_U16	AAA	AA00	84	0.24	AA00
16	4qei_C_U16_G18	NAN	NANT	0	1.63	IC04
17	4qei_C_G18_G19	NAN	NANT	0	0.40	IC05
18	4qei_C_G19_U20	NAN	NANT	0	1.19	OP10
19	4qei_C_U20_A21	NAN	NANT	0	1.86	ZZS2
20	4qei_C_A21_U22	AAu	AA13	88	0.19	AA13
21	4qei_C_U22_C23	AAA	AA00	76	0.20	AA00
22	4qei_C_C23_A24	AAA	AA00	60	0.19	AA00
23	4qei_C_A24_U25	AAA	AA00	49	0.27	AA00
24	4qei_C_U25_G26	AAA	AA08	86	0.26	AA08
25	4qei_C_G26_C27	AAA	AA08	92	0.19	AA08
26	4qei_C_C27_A28	AAA	AA03	84	0.12	AA03
27	4qei_C_A28_A29	AAA	AA00	78	0.08	AA00
28	4qei_C_A29_G30	AAA	AA00	47	0.16	AA00
29	4qei_C_G30_A31	AAw	AA01	66	0.27	AA01
30	4qei_C_A31_U32	AAA	AA08	86	0.27	AA08
31	4qei_C_U32_U33	NAN	NANT	0	0.35	AB2S
32	4qei_C_U33_C34	NAN	NANT	0	0.47	AAS1
33	4qei_C_C34_C35	NAN	NANT	0	1.26	OP22
34	4qei_C_C35_C36	OPN	OP22	63	0.73	OP22
35	4qei_C_C36_A37	NAN	NANT	0	2.13	OP19
36	4qei_C_A37_U38	NAN	NANT	0	1.55	OP17
37	4qei_C_U38_U39	AAA	AA08	81	0.15	AA08
38	4qei_C_U39_C40	AAA	AA00	77	0.14	AA00
39	4qei_C_C40_U41	AAA	AA00	96	0.09	AA00
40	4qei_C_U41_U42	AAA	AA08	88	0.16	AA08
41	4qei_C_U42_G43	AAA	AA00	77	0.19	AA00
42	4qei_C_G43_C44	AAA	AA00	79	0.21	AA00
43	4qei_C_C44_G45	AAA	AA00	34	0.31	AA00
44	4qei_C_G45_A46	NAN	NANT	0	0.55	AA12
45	4qei_C_A46_C48	NAN	NANT	0	0.55	IC04
46	4qei_C_C48_C49	NAN	NANT	0	1.18	OP05
47	4qei_C_C49_C50	AAA	AA00	82	0.18	AA00
48	4qei_C_C50_G51	AAA	AA00	86	0.14	AA00
49	4qei_C_G51_G52	AAA	AA00	79	0.14	AA00
50	4qei_C_G52_G53	AAA	AA00	86	0.17	AA00
51	4qei_C_G53_U54	AAA	AA08	97	0.21	AA08
52	4qei_C_U54_U55	AAA	AA08	70	0.29	AA08
53	4qei_C_U55_C56	OPN	OP04	16	0.24	OP04
54	4qei_C_C56_G57	AAA	AA08	95	0.21	AA08
55	4qei_C_G57_A58	NAN	NANT	0	0.96	AB2S
56	4qei_C_A58_U59	NAN	NANT	0	1.25	OP18
57	4qei_C_U59_U60	A-B	AB05	93	0.19	AB05
58	4qei_C_U60_C61	OPN	OP12	83	0.12	OP12
59	4qei_C_C61_C62	AAA	AA00	65	0.18	AA00
60	4qei_C_C62_C63	AAA	AA00	93	0.17	AA00
61	4qei_C_C63_G64	AAA	AA00	85	0.13	AA00
62	4qei_C_G64_G65	AAw	AA01	56	0.28	AA01
63	4qei_C_G65_G66	AAA	AA08	84	0.25	AA08
64	4qei_C_G66_C67	AAA	AA00	75	0.14	AA00
65	4qei_C_C67_G68	AAA	AA00	92	0.13	AA00
66	4qei_C_G68_G69	AAA	AA00	75	0.16	AA00
67	4qei_C_G69_C70	AAA	AA00	43	0.33	AA00
68	4qei_C_C70_G71	AAw	AA01	47	0.38	AA01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 68 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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