Conformers:
ABBIImiBZICOPNSYNN
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Crystal structure of human dna polymerase eta in ternary complex with native dna and incoming nucleotide (dcp)
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 18 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 01 | 4o3n_T_DA2_DT3 | NAN | NANT | 0 | 2.24 |
| 02 | 4o3n_T_DT3_DG4 | NAN | NANT | 0 | 0.78 |
| 03 | 4o3n_T_DG4_DA5 | BBB | BB00 | 84 | 0.15 |
| 04 | 4o3n_T_DA5_DT6 | B-A | BA09 | 72 | 0.31 |
| 05 | 4o3n_T_DT6_DG7 | NAN | NANT | 0 | 0.50 |
| 06 | 4o3n_T_DG7_DA8 | BBB | BB00 | 11 | 0.44 |
| 07 | 4o3n_T_DA8_DC9 | BBB | BB00 | 92 | 0.17 |
| 08 | 4o3n_T_DC9_DG10 | B12 | BB04 | 80 | 0.23 |
| 09 | 4o3n_T_DG10_DC11 | BBB | BB00 | 81 | 0.18 |
| 10 | 4o3n_T_DC11_DT12 | B-A | BA05 | 88 | 0.11 |
| 11 | 4o3n_P_DA1_DG2 | BBw | BB16 | 46 | 0.43 |
| 12 | 4o3n_P_DG2_DC3 | BBB | BB00 | 61 | 0.28 |
| 13 | 4o3n_P_DC3_DG4 | BBB | BB01 | 82 | 0.13 |
| 14 | 4o3n_P_DG4_DT5 | BBB | BB00 | 76 | 0.25 |
| 15 | 4o3n_P_DT5_DC6 | B-A | BA05 | 89 | 0.09 |
| 16 | 4o3n_P_DC6_DA7 | B-A | BA05 | 16 | 0.32 |
| 17 | 4o3n_P_DA7_DT.A8 | A-B | AB01 | 29 | 0.29 |
| 18 | 4o3n_P_DA7_DT.B8 | NAN | NANT | 0 | 0.53 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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| Color by conformation group (pyramids) | |
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