Conformers:
ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
Ternary complex of Bloom's syndrome helicase
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 26 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 01 | 4o3m_P_DG2_DC3 | miB | BB10 | 32 | 0.24 |
| 02 | 4o3m_P_DC3_DG4 | BB2 | BB07 | 85 | 0.23 |
| 03 | 4o3m_P_DG4_DT5 | BBB | BB01 | 37 | 0.19 |
| 04 | 4o3m_P_DT5_DC6 | BBB | BB01 | 58 | 0.21 |
| 05 | 4o3m_P_DC6_DG7 | BBB | BB00 | 88 | 0.20 |
| 06 | 4o3m_P_DG7_DA8 | B12 | BB04 | 63 | 0.18 |
| 07 | 4o3m_P_DA8_DG9 | BBB | BB00 | 81 | 0.19 |
| 08 | 4o3m_P_DG9_DA10 | BBB | BB01 | 37 | 0.28 |
| 09 | 4o3m_P_DA10_DT11 | NAN | NANT | 0 | 0.39 |
| 10 | 4o3m_P_DT11_DC12 | NAN | NANT | 0 | 0.79 |
| 11 | 4o3m_P_DC12_DC13 | NAN | NANT | 0 | 0.62 |
| 12 | 4o3m_T_DG4_DG5 | B12 | BB05 | 17 | 0.43 |
| 13 | 4o3m_T_DG5_DA6 | BBw | BB16 | 63 | 0.42 |
| 14 | 4o3m_T_DA6_DT7 | BBB | BB01 | 71 | 0.25 |
| 15 | 4o3m_T_DT7_DC8 | BBB | BB01 | 74 | 0.26 |
| 16 | 4o3m_T_DC8_DT9 | BBB | BB00 | 68 | 0.24 |
| 17 | 4o3m_T_DT9_DC10 | NAN | NANT | 0 | 0.40 |
| 18 | 4o3m_T_DC10_DG11 | BBB | BB00 | 27 | 0.27 |
| 19 | 4o3m_T_DG11_DA12 | B12 | BB05 | 82 | 0.27 |
| 20 | 4o3m_T_DA12_DC13 | BBB | BB00 | 26 | 0.54 |
| 21 | 4o3m_T_DC13_DG14 | B12 | BB04 | 15 | 0.47 |
| 22 | 4o3m_T_DG14_DC15 | OPN | OP12 | 44 | 0.43 |
| 23 | 4o3m_T_DC15_DT16 | NAN | NANT | 0 | 0.99 |
| 24 | 4o3m_T_DT16_DC17 | NAN | NANT | 0 | 0.81 |
| 25 | 4o3m_T_DC17_DT18 | NAN | NANT | 0 | 0.58 |
| 26 | 4o3m_T_DT18_DC19 | NAN | NANT | 0 | 0.96 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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