DNATCO v4.1: results

Structure of Thermus thermophilus Argonaute bound to guide DNA and 19-mer target DNA with Mg2+

Results of the assignment of 64 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	4ncb_C_DT1_DG2	NAN	NANT	0	0.88	OP21
02	4ncb_C_DG2_DA3	NAN	NANT	0	0.34	BA05
03	4ncb_C_DA3_DG4	AAA	AA00	26	0.38	AA00
04	4ncb_C_DG4_DG5	AAA	AA00	65	0.27	AA00
05	4ncb_C_DG5_DT6	A-B	AB05	76	0.15	AB05
06	4ncb_C_DT6_DA7	B-A	BA10	67	0.35	BA10
07	4ncb_C_DA7_DG8	AAA	AA08	89	0.17	AA08
08	4ncb_C_DG8_DT9	AAA	AA00	65	0.18	AA00
09	4ncb_C_DT9_DA10	AAA	AA08	66	0.30	AA08
10	4ncb_C_DA10_DG11	A-B	AB01	19	0.38	AB01
11	4ncb_C_DG11_DG12	BBB	BB00	41	0.36	BB00
12	4ncb_C_DG12_DT13	BBB	BB00	74	0.26	BB00
13	4ncb_C_DT13_DT14	BBB	BB00	94	0.16	BB00
14	4ncb_C_DT14_DG15	BBB	BB00	57	0.39	BB00
15	4ncb_C_DG15_DT16	NAN	NANT	0	0.59	BA17
16	4ncb_P_DC.B5_DA.B6	NAN	NANT	0	0.65	AB02
17	4ncb_P_DA.B6_DA.B7	NAN	NANT	0	0.51	BB10
18	4ncb_P_DA.B7_DC.B8	B-A	BA13	34	0.42	BA13
19	4ncb_P_DC.B8_DC.B9	AAA	AA00	84	0.28	AA00
20	4ncb_D_DC.A5_DA.A6	NAN	NANT	0	0.65	AB02
21	4ncb_D_DA.A6_DA.A7	NAN	NANT	0	0.49	BB10
22	4ncb_D_DA.A7_DC.A8	B-A	BA13	58	0.33	BA13
23	4ncb_D_DC.A8_DC.A9	AAA	AA00	74	0.21	AA00
24	4ncb_D_DC.A9_DT.A10	NAN	NANT	0	0.36	AA04
25	4ncb_D_DT.A10_DA11	NAN	NANT	0	0.45	BB16
26	4ncb_D_DT.B10_DA11	BBw	BB16	44	0.47	BB16
27	4ncb_D_DA11_DC12	B-A	BA01	31	0.27	BA01
28	4ncb_D_DC12_DT13	A-B	AB01	61	0.21	AB01
29	4ncb_D_DT13_DA14	BBB	BB01	42	0.28	BB01
30	4ncb_D_DA14_DC15	BBB	BB00	39	0.27	BB00
31	4ncb_D_DC15_DC16	BBB	BB00	82	0.23	BB00
32	4ncb_D_DC16_DT17	B-A	BA05	92	0.15	BA05
33	4ncb_D_DT17_DC18	BBB	BB01	42	0.30	BB01
34	4ncb_D_DC18_DG19	NAN	NANT	0	1.53	OP22
35	4ncb_E_DT1_DG2	NAN	NANT	0	0.89	OP21
36	4ncb_E_DG2_DA3	NAN	NANT	0	0.37	BA05
37	4ncb_E_DA3_DG4	AAA	AA02	35	0.30	AA02
38	4ncb_E_DG4_DG5	A-B	AB01	82	0.19	AB01
39	4ncb_E_DG5_DT6	BBB	BB00	87	0.14	BB00
40	4ncb_E_DT6_DA7	B-A	BA10	44	0.29	BA10
41	4ncb_E_DA7_DG8	AAA	AA08	93	0.16	AA08
42	4ncb_E_DG8_DT9	AAA	AA00	35	0.14	AA00
43	4ncb_E_DT9_DA10	AAA	AA00	83	0.18	AA00
44	4ncb_E_DA10_DG11	AAA	AA00	44	0.37	AA00
45	4ncb_E_DG11_DG12	NAN	NANT	0	0.50	AB04
46	4ncb_E_DG12_DT13	BBB	BB00	15	0.36	BB00
47	4ncb_E_DT13_DT14	BBB	BB00	81	0.22	BB00
48	4ncb_E_DT14_DG15	BBB	BB00	87	0.23	BB00
49	4ncb_E_DG15_DT16	B12	BB04	77	0.21	BB04
50	4ncb_E_DT16_DA17	NAN	NANT	0	0.88	OP13
51	4ncb_F_DT10_DA11	BBw	BB16	56	0.47	BB16
52	4ncb_F_DA11_DC12	B-A	BA01	33	0.26	BA01
53	4ncb_F_DC12_DT13	A-B	AB01	46	0.26	AB01
54	4ncb_F_DT13_DA14	BBB	BB00	75	0.26	BB00
55	4ncb_F_DA14_DC15	BBB	BB00	87	0.24	BB00
56	4ncb_F_DC15_DC16	BBB	BB00	62	0.32	BB00
57	4ncb_F_DC16_DT17	B-A	BA05	50	0.28	BA05
58	4ncb_F_DT17_DC18	BBB	BB01	45	0.29	BB01
59	4ncb_F_DC18_DG19	NAN	NANT	0	1.59	OP22
60	4ncb_H_DA4_DC5	B-A	BA05	48	0.31	BA05
61	4ncb_H_DC5_DA6	NAN	NANT	0	0.39	AB02
62	4ncb_H_DA6_DA7	BBB	BB00	33	0.40	BB00
63	4ncb_H_DA7_DC8	B-A	BA13	50	0.33	BA13
64	4ncb_H_DC8_DC9	AAA	AA00	65	0.28	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 64 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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