Conformers:
ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
Crystal structure of a polypeptide p53 mutant bound to DNA
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 50 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 01 | 4mzr_K_DT3_DG4 | BB2 | BB07 | 59 | 0.25 |
| 02 | 4mzr_K_DG4_DA5 | B12 | BB04 | 75 | 0.21 |
| 03 | 4mzr_K_DA5_DG6 | NAN | NANT | 0 | 0.41 |
| 04 | 4mzr_K_DG6_DA7 | BBB | BB00 | 55 | 0.34 |
| 05 | 4mzr_K_DA7_DC8 | miB | BB13 | 86 | 0.22 |
| 06 | 4mzr_K_DC8_DT9 | BBw | BB16 | 70 | 0.45 |
| 07 | 4mzr_K_DT9_DT10 | BBB | BB00 | 78 | 0.38 |
| 08 | 4mzr_K_DT10_DG11 | B12 | BB04 | 78 | 0.27 |
| 09 | 4mzr_K_DG11_DC12 | BBw | BB02 | 59 | 0.23 |
| 10 | 4mzr_K_DC12_DC13 | B12 | BB04 | 22 | 0.28 |
| 11 | 4mzr_K_DC13_DC14 | BBB | BB00 | 53 | 0.46 |
| 12 | 4mzr_K_DC14_DA15 | BB2 | BB07 | 84 | 0.24 |
| 13 | 4mzr_K_DA15_DG16 | B12 | BB04 | 77 | 0.18 |
| 14 | 4mzr_K_DG16_DA17 | miB | BB12 | 61 | 0.39 |
| 15 | 4mzr_K_DA17_DC18 | BBB | BB00 | 11 | 0.50 |
| 16 | 4mzr_K_DC18_DT19 | BBB | BB00 | 77 | 0.23 |
| 17 | 4mzr_K_DT19_DT20 | BBB | BB00 | 53 | 0.48 |
| 18 | 4mzr_K_DT20_DG21 | BB2 | BB07 | 84 | 0.21 |
| 19 | 4mzr_K_DG21_DC22 | BBw | BB02 | 71 | 0.20 |
| 20 | 4mzr_K_DC22_DC23 | B12 | BB04 | 69 | 0.21 |
| 21 | 4mzr_K_DC23_DC24 | BBw | BB02 | 60 | 0.28 |
| 22 | 4mzr_K_DC24_DG25 | B12 | BB04 | 68 | 0.26 |
| 23 | 4mzr_K_DG25_DT26 | BBB | BB00 | 78 | 0.20 |
| 24 | 4mzr_K_DT26_DT27 | BBB | BB00 | 85 | 0.26 |
| 25 | 4mzr_K_DT27_DT28 | BBB | BB00 | 81 | 0.21 |
| 26 | 4mzr_L_DA27_DC28 | NAN | NANT | 0 | 0.69 |
| 27 | 4mzr_L_DC28_DG29 | BBw | BB11 | 91 | 0.19 |
| 28 | 4mzr_L_DG29_DG30 | BBB | BB00 | 44 | 0.28 |
| 29 | 4mzr_L_DG30_DG31 | BBB | BB00 | 91 | 0.11 |
| 30 | 4mzr_L_DG31_DC32 | BBw | BB03 | 46 | 0.40 |
| 31 | 4mzr_L_DC32_DA33 | BBB | BB00 | 58 | 0.39 |
| 32 | 4mzr_L_DA33_DA34 | NAN | NANT | 0 | 0.50 |
| 33 | 4mzr_L_DA34_DG35 | BBB | BB00 | 74 | 0.34 |
| 34 | 4mzr_L_DG35_DT36 | BBB | BB00 | 89 | 0.14 |
| 35 | 4mzr_L_DT36_DC37 | B12 | BB04 | 75 | 0.23 |
| 36 | 4mzr_L_DC37_DT38 | BBB | BB00 | 66 | 0.21 |
| 37 | 4mzr_L_DT38_DG39 | B12 | BB04 | 52 | 0.36 |
| 38 | 4mzr_L_DG39_DG40 | BB2 | BB07 | 55 | 0.21 |
| 39 | 4mzr_L_DG40_DG41 | BBB | BB00 | 93 | 0.12 |
| 40 | 4mzr_L_DG41_DC42 | BBB | BB00 | 82 | 0.22 |
| 41 | 4mzr_L_DC42_DA43 | BBB | BB00 | 74 | 0.23 |
| 42 | 4mzr_L_DA43_DA44 | BBB | BB00 | 61 | 0.41 |
| 43 | 4mzr_L_DA44_DG45 | B12 | BB04 | 63 | 0.35 |
| 44 | 4mzr_L_DG45_DT46 | BBB | BB00 | 89 | 0.21 |
| 45 | 4mzr_L_DT46_DC47 | BBB | BB00 | 89 | 0.22 |
| 46 | 4mzr_L_DC47_DT48 | BBB | BB00 | 86 | 0.18 |
| 47 | 4mzr_L_DT48_DC49 | B12 | BB04 | 75 | 0.27 |
| 48 | 4mzr_L_DC49_DA50 | B12 | BB04 | 44 | 0.23 |
| 49 | 4mzr_L_DA50_DA51 | B12 | BB04 | 79 | 0.26 |
| 50 | 4mzr_L_DA51_DA52 | BBw | BB11 | 75 | 0.24 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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