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Conformers: ABBIImiBZICOPNSYNN
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Crystal structure of S. aureus MepR-DNA complex

Results of the assignment of 138 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0014lll_E_DA1_DT2NANNANT00.51 BB02
0024lll_E_DT2_DT3BBBBB00220.37 BB00
0034lll_E_DT3_DT4NANNANT00.26 BB15
0044lll_E_DT4_DA5NANNANT00.48 BA17
0054lll_E_DA5_DG6BBBBB01630.21 BB01
0064lll_E_DG6_DT7BBBBB00770.29 BB00
0074lll_E_DT7_DT8BBBBB00900.15 BB00
0084lll_E_DT8_DA9BBBBB00110.19 BB00
0094lll_E_DA9_DG10BBBBB00510.17 BB00
0104lll_E_DG10_DA11B-ABA08780.29 BA08
0114lll_E_DA11_DT12NANNANT00.48 AB04
0124lll_E_DT12_DA13BBBBB01580.14 BB01
0134lll_E_DA13_DT14B-ABA05670.11 BA05
0144lll_E_DT14_DC15AAAAA00390.43 AA00
0154lll_E_DC15_DT16A-BAB01850.24 AB01
0164lll_E_DT16_DA17BBwBB02250.37 BB02
0174lll_E_DA17_DA18BBBBB0180.38 BB01
0184lll_E_DA18_DC19B-ABA08740.49 BA08
0194lll_E_DC19_DT20NANNANT00.54 AB04
0204lll_E_DT20_DA21B-ABA05400.28 BA05
0214lll_E_DA21_DA22A-BAB03350.21 AB03
0224lll_E_DA22_DA23BB2BB07470.34 BB07
0234lll_E_DA23_DT24B-ABA01600.25 BA01
0244lll_F_DA1_DT2NANNANT00.38 BB03
0254lll_F_DT2_DT3NANNANT00.47 BB08
0264lll_F_DT3_DT4miBBB15100.45 BB15
0274lll_F_DT4_DA5NANNANT00.47 BA08
0284lll_F_DA5_DG6BBBBB00670.17 BB00
0294lll_F_DG6_DT7NANNANT00.43 BB02
0304lll_F_DT7_DT8NANNANT00.58 BA08
0314lll_F_DT8_DA9A-BAB03620.31 AB03
0324lll_F_DA9_DG10BBBBB00700.27 BB00
0334lll_F_DG10_DA11B-ABA08480.32 BA08
0344lll_F_DA11_DT12A-BAB01220.31 AB01
0354lll_F_DT12_DA13B-ABA05560.18 BA05
0364lll_F_DA13_DT14B-ABA05550.16 BA05
0374lll_F_DT14_DC15AAAAA00230.42 AA00
0384lll_F_DC15_DT16A-BAB01430.23 AB01
0394lll_F_DT16_DA17BBBBB00840.15 BB00
0404lll_F_DA17_DA18BBBBB00470.22 BB00
0414lll_F_DA18_DC19B-ABA05620.24 BA05
0424lll_F_DC19_DT20A-BAB01780.29 AB01
0434lll_F_DT20_DA21B-ABA08600.54 BA08
0444lll_F_DA21_DA22AAAAA02100.61 AA02
0454lll_F_DA22_DA23NANNANT00.44 AA04
0464lll_F_DA23_DT24NANNANT00.61 AA01
0474lll_G_DA1_DT2BBBBB00410.34 BB00
0484lll_G_DT2_DT3B-ABA17500.34 BA17
0494lll_G_DT3_DT4A-BAB03480.35 AB03
0504lll_G_DT4_DA5miBBB15470.29 BB15
0514lll_G_DA5_DG6B-ABA05300.35 BA05
0524lll_G_DG6_DT7BBBBB00110.41 BB00
0534lll_G_DT7_DT8BBBBB00850.16 BB00
0544lll_G_DT8_DA9NANNANT00.30 BB10
0554lll_G_DA9_DG10NANNANT00.39 BA17
0564lll_G_DG10_DA11NANNANT00.41 BB03
0574lll_G_DA11_DT12A-BAB04200.51 AB04
0584lll_G_DT12_DA13BBBBB01650.13 BB01
0594lll_G_DA13_DT14B-ABA0160.27 BA01
0604lll_G_DT14_DC15AAAAA00620.38 AA00
0614lll_G_DC15_DT16A-BAB05780.20 AB05
0624lll_G_DT16_DA17BBBBB00830.20 BB00
0634lll_G_DA17_DA18BBBBB00520.26 BB00
0644lll_G_DA18_DC19B-ABA08480.34 BA08
0654lll_G_DC19_DT20A-BAB05620.21 AB05
0664lll_G_DT20_DA21miBBB10400.28 BB10
0674lll_G_DA21_DA22BBBBB00440.28 BB00
0684lll_G_DA22_DA23NANNANT00.69 BA16
0694lll_G_DA23_DT24NANNANT00.47 BB03
0704lll_H_DA1_DT2B-ABA17620.31 BA17
0714lll_H_DT2_DT3BB2BB08100.48 BB08
0724lll_H_DT3_DT4NANNANT00.61 BB02
0734lll_H_DT4_DA5NANNANT00.43 BA17
0744lll_H_DA5_DG6BBBBB00630.22 BB00
0754lll_H_DG6_DT7BBBBB00800.29 BB00
0764lll_H_DT7_DT8BBBBB00890.17 BB00
0774lll_H_DT8_DA9NANNANT00.41 BB02
0784lll_H_DA9_DG10BBBBB00190.41 BB00
0794lll_H_DG10_DA11B-ABA08770.22 BA08
0804lll_H_DA11_DT12A-BAB04650.35 AB04
0814lll_H_DT12_DA13BBBBB01580.15 BB01
0824lll_H_DA13_DT14B-ABA05530.18 BA05
0834lll_H_DT14_DC15AAAAA00320.41 AA00
0844lll_H_DC15_DT16A-BAB01560.24 AB01
0854lll_H_DT16_DA17BBBBB00840.14 BB00
0864lll_H_DA17_DA18BBBBB00750.25 BB00
0874lll_H_DA18_DC19B-ABA01220.22 BA01
0884lll_H_DC19_DT20A-BAB01720.27 AB01
0894lll_H_DT20_DA21B-ABA08530.54 BA08
0904lll_H_DA21_DA22BBBBB01350.28 BB01
0914lll_H_DA22_DA23BBBBB00340.37 BB00
0924lll_H_DA23_DT24BBwBB02150.43 BB02
0934lll_K_DA1_DT2NANNANT00.51 BB17
0944lll_K_DT2_DT3A-BAB03350.26 AB03
0954lll_K_DT3_DT4NANNANT00.33 BB10
0964lll_K_DT4_DA5BB2BB07100.50 BB07
0974lll_K_DA5_DG6B-ABA05740.28 BA05
0984lll_K_DG6_DT7BBBBB01270.31 BB01
0994lll_K_DT7_DT8BBBBB00600.18 BB00
1004lll_K_DT8_DA9BBBBB00780.17 BB00
1014lll_K_DA9_DG10B12BB04700.36 BB04
1024lll_K_DG10_DA11B-ABA08750.28 BA08
1034lll_K_DA11_DT12A-BAB01100.29 AB01
1044lll_K_DT12_DA13BBBBB01540.16 BB01
1054lll_K_DA13_DT14B-ABA05190.21 BA05
1064lll_K_DT14_DC15AAAAA00470.39 AA00
1074lll_K_DC15_DT16A-BAB05810.20 AB05
1084lll_K_DT16_DA17BBwBB02510.23 BB02
1094lll_K_DA17_DA18B-ABA05670.36 BA05
1104lll_K_DA18_DC19B-ABA05560.22 BA05
1114lll_K_DC19_DT20NANNANT00.43 BB10
1124lll_K_DT20_DA21B-ABA17480.33 BA17
1134lll_K_DA21_DA22BBBBB00680.28 BB00
1144lll_K_DA22_DA23NANNANT00.36 BA13
1154lll_K_DA23_DT24NANNANT00.40 AA03
1164lll_L_DA1_DT2NANNANT00.42 AB04
1174lll_L_DT2_DT3NANNANT00.43 BA05
1184lll_L_DT3_DT4A-BAB03640.50 AB03
1194lll_L_DT4_DA5B-ABA17790.26 BA17
1204lll_L_DA5_DG6NANNANT00.50 AA01
1214lll_L_DG6_DT7NANNANT00.35 AB03
1224lll_L_DT7_DT8BBBBB00420.26 BB00
1234lll_L_DT8_DA9BBwBB17670.24 BB17
1244lll_L_DA9_DG10miBBB10390.31 BB10
1254lll_L_DG10_DA11NANNANT00.34 BA10
1264lll_L_DA11_DT12A-BAB05610.24 AB05
1274lll_L_DT12_DA13BBBBB01890.10 BB01
1284lll_L_DA13_DT14B-ABA05150.18 BA05
1294lll_L_DT14_DC15AAAAA00560.40 AA00
1304lll_L_DC15_DT16A-BAB01820.20 AB01
1314lll_L_DT16_DA17BBBBB00950.14 BB00
1324lll_L_DA17_DA18BBBBB01820.18 BB01
1334lll_L_DA18_DC19B-ABA05200.30 BA05
1344lll_L_DC19_DT20NANNANT00.34 AB03
1354lll_L_DT20_DA21BBBBB00490.21 BB00
1364lll_L_DA21_DA22B-ABA05460.37 BA05
1374lll_L_DA22_DA23B-ABA05160.40 BA05
1384lll_L_DA23_DT24NANNANT00.57 BB02

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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