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Conformers: ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
Structure of mouse cGAS bound to 18 bp DNA

Results of the assignment of 136 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0014ley_E_DA1_DT2NANNANT00.56 BB16
0024ley_E_DT2_DC3BBBBB00540.21 BB00
0034ley_E_DC3_DT4BBwBB02190.38 BB02
0044ley_E_DT4_DG5BBBBB00100.32 BB00
0054ley_E_DG5_DT6BBBBB00330.25 BB00
0064ley_E_DT6_DA7BBBBB00520.27 BB00
0074ley_E_DA7_DC8BB2BB07490.29 BB07
0084ley_E_DC8_DA9BBwBB03230.29 BB03
0094ley_E_DA9_DT10BBBBB01230.34 BB01
0104ley_E_DT10_DG11BBBBB00370.25 BB00
0114ley_E_DG11_DT12BBBBB00820.26 BB00
0124ley_E_DT12_DA13B12BB04780.23 BB04
0134ley_E_DA13_DC14BBBBB00930.13 BB00
0144ley_E_DC14_DA15BBBBB00690.28 BB00
0154ley_E_DA15_DG16B12BB04800.20 BB04
0164ley_E_DG16_DA17BBBBB00730.27 BB00
0174ley_E_DA17_DT18BBBBB01300.28 BB01
0184ley_F_DA1_DT2NANNANT00.51 BB16
0194ley_F_DT2_DC3BBBBB00360.25 BB00
0204ley_F_DC3_DT4BBBBB01750.20 BB01
0214ley_F_DT4_DG5B12BB04350.33 BB04
0224ley_F_DG5_DT6BBBBB01830.17 BB01
0234ley_F_DT6_DA7BBBBB00910.16 BB00
0244ley_F_DA7_DC8BBBBB00850.21 BB00
0254ley_F_DC8_DA9B-ABA08810.19 BA08
0264ley_F_DA9_DT10BBBBB01400.27 BB01
0274ley_F_DT10_DG11BBBBB00140.24 BB00
0284ley_F_DG11_DT12BBBBB00510.26 BB00
0294ley_F_DT12_DA13B12BB04530.31 BB04
0304ley_F_DA13_DC14BBBBB00790.32 BB00
0314ley_F_DC14_DA15BB2BB07930.23 BB07
0324ley_F_DA15_DG16BBBBB00600.30 BB00
0334ley_F_DG16_DA17B-ABA08810.18 BA08
0344ley_F_DA17_DT18A-BAB01630.30 AB01
0354ley_G_DA1_DT2NANNANT00.39 BB07
0364ley_G_DT2_DC3B-ABA0580.23 BA05
0374ley_G_DC3_DT4BBBBB00170.41 BB00
0384ley_G_DT4_DG5BBBBB00830.18 BB00
0394ley_G_DG5_DT6BBBBB00820.20 BB00
0404ley_G_DT6_DA7BBBBB00660.20 BB00
0414ley_G_DA7_DC8BBBBB00650.27 BB00
0424ley_G_DC8_DA9BB2BB07420.38 BB07
0434ley_G_DA9_DT10BBBBB01710.18 BB01
0444ley_G_DT10_DG11B-ABA10370.33 BA10
0454ley_G_DG11_DT12A-BAB05330.23 AB05
0464ley_G_DT12_DA13NANNANT00.48 BB02
0474ley_G_DA13_DC14BBBBB00430.30 BB00
0484ley_G_DC14_DA15BB2BB07610.28 BB07
0494ley_G_DA15_DG16B-ABA05140.30 BA05
0504ley_G_DG16_DA17BBBBB01480.28 BB01
0514ley_G_DA17_DT18BBBBB01480.23 BB01
0524ley_H_DA1_DT2A-BAB05430.24 AB05
0534ley_H_DT2_DC3B-ABA05650.29 BA05
0544ley_H_DC3_DT4A-BAB03560.34 AB03
0554ley_H_DT4_DG5BBBBB00790.18 BB00
0564ley_H_DG5_DT6BBBBB01760.22 BB01
0574ley_H_DT6_DA7BBBBB00710.20 BB00
0584ley_H_DA7_DC8B-ABA05890.20 BA05
0594ley_H_DC8_DA9AAAAA02490.59 AA02
0604ley_H_DA9_DT10A-BAB03770.35 AB03
0614ley_H_DT10_DG11BBBBB00730.20 BB00
0624ley_H_DG11_DT12BBBBB00800.23 BB00
0634ley_H_DT12_DA13BBBBB00650.34 BB00
0644ley_H_DA13_DC14BBBBB00710.31 BB00
0654ley_H_DC14_DA15BB2BB07770.24 BB07
0664ley_H_DA15_DG16BBBBB00790.26 BB00
0674ley_H_DG16_DA17B-ABA08850.18 BA08
0684ley_H_DA17_DT18A-BAB01450.30 AB01
0694ley_I_DA1_DT2B-ABA08440.39 BA08
0704ley_I_DT2_DC3B-ABA05750.23 BA05
0714ley_I_DC3_DT4BBBBB01140.37 BB01
0724ley_I_DT4_DG5NANNANT00.87 BB16
0734ley_I_DG5_DT6BBBBB00620.32 BB00
0744ley_I_DT6_DA7BBBBB01770.16 BB01
0754ley_I_DA7_DC8BBBBB00530.32 BB00
0764ley_I_DC8_DA9B-ABA17710.29 BA17
0774ley_I_DA9_DT10A-BAB03450.29 AB03
0784ley_I_DT10_DG11B-ABA01510.22 BA01
0794ley_I_DG11_DT12A-BAB01540.30 AB01
0804ley_I_DT12_DA13BBwBB02320.41 BB02
0814ley_I_DA13_DC14B-ABA08500.51 BA08
0824ley_I_DC14_DA15A-BAB03520.36 AB03
0834ley_I_DA15_DG16NANNANT00.37 BA08
0844ley_I_DG16_DA17BBBBB01350.29 BB01
0854ley_I_DA17_DT18BBBBB00510.33 BB00
0864ley_J_DA1_DT2BBBBB00250.44 BB00
0874ley_J_DT2_DC3B-ABA05670.37 BA05
0884ley_J_DC3_DT4B-ABA05310.29 BA05
0894ley_J_DT4_DG5BBBBB00190.33 BB00
0904ley_J_DG5_DT6B-ABA05190.33 BA05
0914ley_J_DT6_DA7BBBBB01380.20 BB01
0924ley_J_DA7_DC8BBBBB01850.24 BB01
0934ley_J_DC8_DA9B-ABA05120.27 BA05
0944ley_J_DA9_DT10A-BAB01170.29 AB01
0954ley_J_DT10_DG11BBBBB00960.11 BB00
0964ley_J_DG11_DT12BBBBB00630.20 BB00
0974ley_J_DT12_DA13BBBBB00360.35 BB00
0984ley_J_DA13_DC14BBBBB00500.36 BB00
0994ley_J_DC14_DA15BB2BB07810.22 BB07
1004ley_J_DA15_DG16BBBBB00880.20 BB00
1014ley_J_DG16_DA17B-ABA08670.33 BA08
1024ley_J_DA17_DT18A-BAB03790.23 AB03
1034ley_K_DA1_DT2A-BAB01110.37 AB01
1044ley_K_DT2_DC3BBBBB00570.25 BB00
1054ley_K_DC3_DT4BBwBB02110.42 BB02
1064ley_K_DT4_DG5NANNANT00.45 BA17
1074ley_K_DG5_DT6BBBBB00510.24 BB00
1084ley_K_DT6_DA7BBBBB00420.36 BB00
1094ley_K_DA7_DC8BB2BB07590.36 BB07
1104ley_K_DC8_DA9BBBBB00280.40 BB00
1114ley_K_DA9_DT10BBBBB01550.28 BB01
1124ley_K_DT10_DG11B-ABA05640.36 BA05
1134ley_K_DG11_DT12NANNANT00.47 AA00
1144ley_K_DT12_DA13A-BAB01810.35 AB01
1154ley_K_DA13_DC14BB2BB07760.27 BB07
1164ley_K_DC14_DA15BBBBB00670.32 BB00
1174ley_K_DA15_DG16BBBBB00730.27 BB00
1184ley_K_DG16_DA17B12BB04660.28 BB04
1194ley_K_DA17_DT18BBBBB01570.23 BB01
1204ley_L_DA1_DT2A-BAB04230.39 AB04
1214ley_L_DT2_DC3BBBBB01660.15 BB01
1224ley_L_DC3_DT4BBBBB00800.18 BB00
1234ley_L_DT4_DG5B12BB04800.21 BB04
1244ley_L_DG5_DT6BBBBB01800.17 BB01
1254ley_L_DT6_DA7BBBBB01840.20 BB01
1264ley_L_DA7_DC8B-ABA05310.30 BA05
1274ley_L_DC8_DA9AAAAA00330.37 AA00
1284ley_L_DA9_DT10A-BAB01410.24 AB01
1294ley_L_DT10_DG11BBBBB01900.14 BB01
1304ley_L_DG11_DT12BBBBB01780.24 BB01
1314ley_L_DT12_DA13B12BB04480.34 BB04
1324ley_L_DA13_DC14BBBBB00840.22 BB00
1334ley_L_DC14_DA15BB2BB07860.32 BB07
1344ley_L_DA15_DG16BBBBB00620.29 BB00
1354ley_L_DG16_DA17B-ABA08770.30 BA08
1364ley_L_DA17_DT18B-ABA05190.37 BA05

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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