Conformers:
ABBIImiBZICOPNSYNN
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Crystal Structure of p73 DNA-Binding Domain Tetramer bound to a Full Response-Element
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 18 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 01 | 4g82_E_DG400_DA401 | NAN | NANT | 0 | 0.51 |
| 02 | 4g82_E_DA401_DA402 | B12 | BB04 | 24 | 0.39 |
| 03 | 4g82_E_DA402_DC403 | miB | BB15 | 66 | 0.33 |
| 04 | 4g82_E_DC403_DA404 | NAN | NANT | 0 | 0.51 |
| 05 | 4g82_E_DA404_DT405 | A-B | AB02 | 78 | 0.36 |
| 06 | 4g82_E_DT405_DG406 | B12 | BB04 | 41 | 0.26 |
| 07 | 4g82_E_DG406_DT407 | BBB | BB00 | 72 | 0.26 |
| 08 | 4g82_E_DT407_DT408 | BBB | BB00 | 76 | 0.15 |
| 09 | 4g82_E_DT408_DC409 | miB | BB10 | 44 | 0.27 |
| 10 | 4g82_F_DG410_DA411 | B12 | BB04 | 63 | 0.30 |
| 11 | 4g82_F_DA411_DA412 | miB | BB10 | 71 | 0.34 |
| 12 | 4g82_F_DA412_DC413 | B12 | BB04 | 54 | 0.31 |
| 13 | 4g82_F_DC413_DA414 | NAN | NANT | 0 | 0.30 |
| 14 | 4g82_F_DA414_DT415 | NAN | NANT | 0 | 0.57 |
| 15 | 4g82_F_DT415_DG416 | B12 | BB04 | 69 | 0.23 |
| 16 | 4g82_F_DG416_DT417 | BBB | BB00 | 83 | 0.24 |
| 17 | 4g82_F_DT417_DT418 | BBB | BB00 | 73 | 0.30 |
| 18 | 4g82_F_DT418_DC419 | BBB | BB00 | 62 | 0.30 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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