DNATCO v4.1: results

Open and closed ternary complex of R283K DNA polymerase beta with a dCTP analog in the same asymmetric unit

Results of the assignment of 56 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	4f5r_D_DG1_DT2	BBB	BB01	85	0.20	BB01
02	4f5r_D_DT2_DC3	B-A	BA05	80	0.27	BA05
03	4f5r_D_DC3_DG4	A-B	AB01	22	0.17	AB01
04	4f5r_D_DG4_DG5	B12	BB04	23	0.22	BB04
05	4f5r_P_DG1_DC2	BBB	BB00	50	0.26	BB00
06	4f5r_P_DC2_DT3	BBB	BB01	77	0.19	BB01
07	4f5r_P_DT3_DG4	BBB	BB00	70	0.25	BB00
08	4f5r_P_DG4_DA5	BBB	BB00	86	0.23	BB00
09	4f5r_P_DA5_DT6	BBB	BB00	79	0.15	BB00
10	4f5r_P_DT6_DG7	BBB	BB00	26	0.19	BB00
11	4f5r_P_DG7_DC8	B-A	BA05	82	0.15	BA05
12	4f5r_P_DC8_DG9	A-B	AB01	56	0.27	AB01
13	4f5r_P_DG9_DC10	miB	BB12	68	0.24	BB12
14	4f5r_T_DC1_DC2	B-A	BA01	26	0.19	BA01
15	4f5r_T_DC2_DG3	A-B	AB01	76	0.22	AB01
16	4f5r_T_DG3_DA4	BBB	BB00	83	0.25	BB00
17	4f5r_T_DA4_DC5	B-A	BA05	67	0.22	BA05
18	4f5r_T_DC5_DG6	NAN	NANT	0	1.31	OP21
19	4f5r_T_DG6_DG7	BBB	BB00	51	0.30	BB00
20	4f5r_T_DG7_DC8	B-A	BA17	91	0.20	BA17
21	4f5r_T_DC8_DG9	BBB	BB00	19	0.41	BB00
22	4f5r_T_DG9_DC10	BBB	BB00	89	0.18	BB00
23	4f5r_T_DC10_DA11	BBB	BB00	88	0.22	BB00
24	4f5r_T_DA11_DT12	BBB	BB01	50	0.25	BB01
25	4f5r_T_DT12_DC13	BBB	BB01	49	0.24	BB01
26	4f5r_T_DC13_DA14	BBB	BB00	21	0.20	BB00
27	4f5r_T_DA14_DG15	BBB	BB00	78	0.15	BB00
28	4f5r_T_DG15_DC16	miB	BB12	86	0.25	BB12
29	4f5r_C_DG1_DT2	BBB	BB01	76	0.21	BB01
30	4f5r_C_DT2_DC3	B-A	BA05	50	0.33	BA05
31	4f5r_C_DC3_DG4	A-B	AB01	53	0.22	AB01
32	4f5r_C_DG4_DG5	BBB	BB00	12	0.26	BB00
33	4f5r_G_DG1_DC2	BBB	BB00	82	0.17	BB00
34	4f5r_G_DC2_DT3	BBB	BB00	91	0.16	BB00
35	4f5r_G_DT3_DG4	B12	BB04	70	0.26	BB04
36	4f5r_G_DG4_DA5	BBB	BB00	72	0.32	BB00
37	4f5r_G_DA5_DT6	BBB	BB01	72	0.21	BB01
38	4f5r_G_DT6_DG7	BBB	BB00	26	0.26	BB00
39	4f5r_G_DG7_DC8	BBB	BB01	61	0.18	BB01
40	4f5r_G_DC8_DG9	B-A	BA05	53	0.32	BA05
41	4f5r_G_DG9_DC10	AAA	AA00	27	0.37	AA00
42	4f5r_F_DC1_DC2	NAN	NANT	0	0.42	BB16
43	4f5r_F_DC2_DG3	NAN	NANT	0	0.51	BA17
44	4f5r_F_DG3_DA4	B12	BB04	8	0.39	BB04
45	4f5r_F_DA4_DC5	BBB	BB00	69	0.29	BB00
46	4f5r_F_DC5_DG6	NAN	NANT	0	1.36	OP21
47	4f5r_F_DG6_DG7	BBB	BB00	56	0.32	BB00
48	4f5r_F_DG7_DC8	BBB	BB00	11	0.41	BB00
49	4f5r_F_DC8_DG9	BBB	BB00	11	0.55	BB00
50	4f5r_F_DG9_DC10	BBB	BB00	91	0.19	BB00
51	4f5r_F_DC10_DA11	BBB	BB00	78	0.23	BB00
52	4f5r_F_DA11_DT12	BBB	BB00	53	0.17	BB00
53	4f5r_F_DT12_DC13	BBB	BB00	62	0.27	BB00
54	4f5r_F_DC13_DA14	B12	BB04	60	0.33	BB04
55	4f5r_F_DA14_DG15	BBB	BB00	66	0.16	BB00
56	4f5r_F_DG15_DC16	miB	BB12	77	0.25	BB12

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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Results of the assignment of 56 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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