DNATCO v4.1: results

Hermes transposase bound to its terminal inverted repeat

Results of the assignment of 116 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	4d1q_C_DA1_DG2	BBB	BB00	34	0.58	BB00
002	4d1q_C_DG2_DA3	B-A	BA13	66	0.23	BA13
003	4d1q_C_DA3_DG4	A-B	AB05	27	0.44	AB05
004	4d1q_C_DG4_DA5	NAN	NANT	0	0.41	BB03
005	4d1q_C_DA5_DA6	A-B	AB01	10	0.29	AB01
006	4d1q_C_DA6_DC7	BBB	BB00	65	0.17	BB00
007	4d1q_C_DC7_DA8	BB2	BB07	69	0.32	BB07
008	4d1q_C_DA8_DA9	B12	BB04	29	0.42	BB04
009	4d1q_C_DA9_DC10	NAN	NANT	0	0.40	BB05
010	4d1q_C_DC10_DA11	NAN	NANT	0	0.55	BB16
011	4d1q_C_DA11_DA12	B12	BB04	13	0.27	BB04
012	4d1q_C_DA12_DC13	B-A	BA05	65	0.24	BA05
013	4d1q_C_DC13_DA14	NAN	NANT	0	0.53	BA08
014	4d1q_C_DA14_DA15	BBB	BB00	38	0.29	BB00
015	4d1q_D_DT1_DT2	BBB	BB01	46	0.43	BB01
016	4d1q_D_DT2_DG3	NAN	NANT	0	0.44	BB02
017	4d1q_D_DG3_DT4	B-A	BA05	9	0.41	BA05
018	4d1q_D_DT4_DT5	AAw	AA01	33	0.35	AA01
019	4d1q_D_DT5_DG6	A-B	AB05	36	0.38	AB05
020	4d1q_D_DG6_DT7	NAN	NANT	0	0.31	BB02
021	4d1q_D_DT7_DT8	NAN	NANT	0	0.39	AA01
022	4d1q_D_DT8_DG9	A-B	AB01	41	0.45	AB01
023	4d1q_D_DG9_DT10	BBB	BB00	49	0.37	BB00
024	4d1q_D_DT10_DT11	BBB	BB01	73	0.18	BB01
025	4d1q_D_DT11_DC12	NAN	NANT	0	0.35	BA10
026	4d1q_D_DC12_DT13	AAA	AA00	76	0.30	AA00
027	4d1q_D_DT13_DC14	AAA	AA00	55	0.26	AA00
028	4d1q_D_DC14_DT15	NAN	NANT	0	0.51	BB02
029	4d1q_D_DT15_DG16	NAN	NANT	0	0.62	BB13
030	4d1q_E_DA1_DG2	BBw	BB16	25	0.35	BB16
031	4d1q_E_DG2_DA3	B-A	BA10	82	0.37	BA10
032	4d1q_E_DA3_DG4	NAN	NANT	0	0.73	IC03
033	4d1q_E_DG4_DA5	NAN	NANT	0	0.43	BB03
034	4d1q_E_DA5_DA6	A-B	AB05	78	0.28	AB05
035	4d1q_E_DA6_DC7	BBB	BB00	74	0.15	BB00
036	4d1q_E_DC7_DA8	BB2	BB07	76	0.34	BB07
037	4d1q_E_DA8_DA9	BBB	BB00	75	0.20	BB00
038	4d1q_E_DA9_DC10	NAN	NANT	0	0.36	BB05
039	4d1q_E_DC10_DA11	NAN	NANT	0	0.50	BB16
040	4d1q_E_DA11_DA12	BBB	BB00	9	0.31	BB00
041	4d1q_E_DA12_DC13	NAN	NANT	0	0.62	AA04
042	4d1q_E_DC13_DA14	NAN	NANT	0	0.58	BB10
043	4d1q_E_DA14_DA15	BBw	BB17	35	0.18	BB17
044	4d1q_F_DT1_DT2	B-A	BA05	17	0.37	BA05
045	4d1q_F_DT2_DG3	NAN	NANT	0	0.47	BB02
046	4d1q_F_DG3_DT4	NAN	NANT	0	0.44	BA05
047	4d1q_F_DT4_DT5	AAw	AA01	18	0.38	AA01
048	4d1q_F_DT5_DG6	NAN	NANT	0	0.55	AA00
049	4d1q_F_DG6_DT7	NAN	NANT	0	0.33	BB02
050	4d1q_F_DT7_DT8	NAN	NANT	0	0.42	AA01
051	4d1q_F_DT8_DG9	A-B	AB01	34	0.47	AB01
052	4d1q_F_DG9_DT10	BBB	BB00	58	0.31	BB00
053	4d1q_F_DT10_DT11	BBB	BB00	34	0.22	BB00
054	4d1q_F_DT11_DC12	B-A	BA10	51	0.34	BA10
055	4d1q_F_DC12_DT13	AAA	AA00	43	0.31	AA00
056	4d1q_F_DT13_DC14	AAA	AA04	80	0.30	AA04
057	4d1q_F_DC14_DT15	NAN	NANT	0	0.56	BB02
058	4d1q_F_DT15_DG16	NAN	NANT	0	0.78	BB02
059	4d1q_I_DA1_DG2	BBB	BB00	13	0.67	BB00
060	4d1q_I_DG2_DA3	B-A	BA13	62	0.22	BA13
061	4d1q_I_DA3_DG4	NAN	NANT	0	0.74	IC03
062	4d1q_I_DG4_DA5	NAN	NANT	0	0.50	BA10
063	4d1q_I_DA5_DA6	A-B	AB01	13	0.25	AB01
064	4d1q_I_DA6_DC7	B12	BB04	15	0.23	BB04
065	4d1q_I_DC7_DA8	BB2	BB07	49	0.42	BB07
066	4d1q_I_DA8_DA9	BBB	BB00	78	0.21	BB00
067	4d1q_I_DA9_DC10	NAN	NANT	0	0.41	BB05
068	4d1q_I_DC10_DA11	NAN	NANT	0	0.45	BB16
069	4d1q_I_DA11_DA12	B12	BB04	60	0.23	BB04
070	4d1q_I_DA12_DC13	BBB	BB00	13	0.30	BB00
071	4d1q_I_DC13_DA14	B-A	BA17	52	0.40	BA17
072	4d1q_I_DA14_DA15	NAN	NANT	0	0.27	BB00
073	4d1q_J_DT1_DT2	BBB	BB01	55	0.28	BB01
074	4d1q_J_DT2_DG3	NAN	NANT	0	0.43	BB02
075	4d1q_J_DG3_DT4	B-A	BA05	41	0.41	BA05
076	4d1q_J_DT4_DT5	NAN	NANT	0	0.41	AA01
077	4d1q_J_DT5_DG6	A-B	AB03	36	0.21	AB03
078	4d1q_J_DG6_DT7	NAN	NANT	0	0.33	BB02
079	4d1q_J_DT7_DT8	NAN	NANT	0	0.52	BA10
080	4d1q_J_DT8_DG9	A-B	AB05	38	0.35	AB05
081	4d1q_J_DG9_DT10	BBB	BB00	77	0.33	BB00
082	4d1q_J_DT10_DT11	B-A	BA01	14	0.21	BA01
083	4d1q_J_DT11_DC12	NAN	NANT	0	0.41	BA10
084	4d1q_J_DC12_DT13	NAN	NANT	0	0.59	BB02
085	4d1q_J_DT13_DC14	AAA	AA04	24	0.30	AA04
086	4d1q_J_DC14_DT15	AAA	AA09	21	0.33	AA09
087	4d1q_J_DT15_DG16	NAN	NANT	0	0.78	BB02
088	4d1q_K_DA1_DG2	BBB	BB00	24	0.72	BB00
089	4d1q_K_DG2_DA3	B-A	BA16	59	0.23	BA16
090	4d1q_K_DA3_DG4	NAN	NANT	0	0.72	IC03
091	4d1q_K_DG4_DA5	NAN	NANT	0	0.42	BA10
092	4d1q_K_DA5_DA6	A-B	AB05	58	0.30	AB05
093	4d1q_K_DA6_DC7	BBB	BB00	73	0.17	BB00
094	4d1q_K_DC7_DA8	BB2	BB07	76	0.35	BB07
095	4d1q_K_DA8_DA9	BBB	BB00	71	0.23	BB00
096	4d1q_K_DA9_DC10	B-A	BA10	39	0.42	BA10
097	4d1q_K_DC10_DA11	NAN	NANT	0	0.30	AB05
098	4d1q_K_DA11_DA12	B12	BB04	15	0.23	BB04
099	4d1q_K_DA12_DC13	BBB	BB01	65	0.17	BB01
100	4d1q_K_DC13_DA14	B-A	BA17	35	0.42	BA17
101	4d1q_K_DA14_DA15	BBB	BB00	28	0.32	BB00
102	4d1q_L_DT1_DT2	BBB	BB01	31	0.35	BB01
103	4d1q_L_DT2_DG3	NAN	NANT	0	0.46	BB02
104	4d1q_L_DG3_DT4	BBB	BB01	35	0.37	BB01
105	4d1q_L_DT4_DT5	NAN	NANT	0	0.40	AA01
106	4d1q_L_DT5_DG6	A-B	AB03	63	0.18	AB03
107	4d1q_L_DG6_DT7	NAN	NANT	0	0.27	BB02
108	4d1q_L_DT7_DT8	NAN	NANT	0	0.49	BA10
109	4d1q_L_DT8_DG9	NAN	NANT	0	0.50	AB01
110	4d1q_L_DG9_DT10	B12	BB04	17	0.44	BB04
111	4d1q_L_DT10_DT11	BBB	BB01	46	0.19	BB01
112	4d1q_L_DT11_DC12	B-A	BA10	46	0.30	BA10
113	4d1q_L_DC12_DT13	NAN	NANT	0	0.61	BB02
114	4d1q_L_DT13_DC14	AAA	AA04	22	0.28	AA04
115	4d1q_L_DC14_DT15	NAN	NANT	0	0.58	BB02
116	4d1q_L_DT15_DG16	NAN	NANT	0	0.88	BB02

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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Results of the assignment of 116 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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