DNATCO v4.1: results

elongating RNA Polymerase II-Bye1 TLD complex

Results of the assignment of 45 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	4by7_N_DA3_DA4	B12	BB04	6	0.53	BB04
02	4by7_N_DA4_DA5	BBB	BB00	46	0.26	BB00
03	4by7_N_DA5_DG6	B-A	BA08	60	0.27	BA08
04	4by7_N_DG6_DT7	A-B	AB01	34	0.26	AB01
05	4by7_N_DT7_DA8	BBB	BB00	69	0.30	BB00
06	4by7_N_DA8_DC9	B12	BB05	34	0.32	BB05
07	4by7_N_DC9_DT10	NAN	NANT	0	0.53	BB03
08	4by7_N_DT10_DT11	miB	BB10	40	0.35	BB10
09	4by7_N_DT11_DG12	BBB	BB01	49	0.26	BB01
10	4by7_N_DG12_DA13	BBB	BB01	59	0.31	BB01
11	4by7_N_DA13_DG14	BB2	BB07	39	0.27	BB07
12	4by7_N_DG14_DC15	B-A	BA05	15	0.36	BA05
13	4by7_P_U2_C3	NAN	NANT	0	1.15	AA03
14	4by7_P_C3_G4	A-B	AB05	61	0.32	AB05
15	4by7_P_G4_A5	B-A	BA08	68	0.23	BA08
16	4by7_P_A5_C6	AAA	AA00	77	0.20	AA00
17	4by7_P_C6_C7	AAA	AA00	83	0.15	AA00
18	4by7_P_C7_A8	AAA	AA00	85	0.19	AA00
19	4by7_P_A8_G9	AAw	AA10	80	0.19	AA10
20	4by7_P_G9_G10	AAA	AA00	50	0.25	AA00
21	4by7_P_G10_A11	AAA	AA00	52	0.26	AA00
22	4by7_T_DG2_DC3	NAN	NANT	0	0.85	BB03
23	4by7_T_DC3_DT4	BBB	BB00	18	0.41	BB00
24	4by7_T_DT4_DC5	BBB	BB00	61	0.34	BB00
25	4by7_T_DC5_DA6	B12	BB04	32	0.29	BB04
26	4by7_T_DA6_DA7	BBB	BB01	61	0.33	BB01
27	4by7_T_DA7_DG8	B-A	BA08	78	0.25	BA08
28	4by7_T_DG8_DT9	NAN	NANT	0	0.46	AA00
29	4by7_T_DT9_DA10	A-B	AB01	44	0.28	AB01
30	4by7_T_DA10_DC11	BBB	BB00	64	0.41	BB00
31	4by7_T_DC11_DT12	B-A	BA08	69	0.28	BA08
32	4by7_T_DT12_DT13	AAA	AA08	64	0.29	AA08
33	4by7_T_DT13_DA14	NAN	NANT	0	0.69	AA11
34	4by7_T_DA14_DT15	AAA	AA00	24	0.49	AA00
35	4by7_T_DT15_DT16	NAN	NANT	0	0.63	OP02
36	4by7_T_DT16_DC17	AAA	AA08	62	0.28	AA08
37	4by7_T_DC17_DC18	AAA	AA00	71	0.22	AA00
38	4by7_T_DC18_BRU19	AAA	AA00	67	0.28	AA00
39	4by7_T_BRU19_DG20	A-B	AB04	55	0.35	AB04
40	4by7_T_DG20_DG21	BBB	BB00	38	0.30	BB00
41	4by7_T_DG21_DT22	BBB	BB01	73	0.16	BB01
42	4by7_T_DT22_DC23	B-A	BA05	61	0.22	BA05
43	4by7_T_DC23_DA24	NAN	NANT	0	0.68	AB1S
44	4by7_T_DA24_DT25	NAN	NANT	0	0.54	AB02
45	4by7_T_DT25_DT26	NAN	NANT	0	0.40	BA05

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 45 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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