DNATCO v4.1: results

Ternary complex of E.coli leucyl-tRNA synthetase, tRNA(Leu)574 and the benzoxaborole AN3017 in the editing conformation

Results of the assignment of 79 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	3zjt_B_G1_C2	NAN	NANT	0	0.93	AA04
02	3zjt_B_C2_C3	NAN	NANT	0	0.47	AA03
03	3zjt_B_C3_C4	AAw	AA11	48	0.34	AA11
04	3zjt_B_C4_G5	NAN	NANT	0	0.55	AA11
05	3zjt_B_G5_G6	NAN	NANT	0	0.64	AA11
06	3zjt_B_G6_A7	A-B	AB05	13	0.27	AB05
07	3zjt_B_A7_U8	OPN	OP11	78	0.30	OP11
08	3zjt_B_U8_G9	NAN	NANT	0	0.76	IC07
09	3zjt_B_G9_G10	NAN	NANT	0	0.90	ZZS1
10	3zjt_B_G10_U11	AAA	AA00	11	0.34	AA00
11	3zjt_B_U11_G12	AAA	AA00	72	0.16	AA00
12	3zjt_B_G12_G13	AAA	AA04	36	0.58	AA04
13	3zjt_B_G13_A14	NAN	NANT	0	0.76	AA01
14	3zjt_B_A14_A15	AAA	AA00	22	0.46	AA00
15	3zjt_B_A15_U16	NAN	NANT	0	1.21	OP01
16	3zjt_B_U16_C17	NAN	NANT	0	0.96	OP02
17	3zjt_B_C17_G18	NAN	NANT	0	0.72	OP05
18	3zjt_B_G18_G19	ICL	IC06	10	0.53	IC06
19	3zjt_B_G19_U20	NAN	NANT	0	1.41	OP20
20	3zjt_B_A20.A_G21	AAA	AA00	41	0.29	AA00
21	3zjt_B_U20_A20.A	NAN	NANT	0	0.45	OP17
22	3zjt_B_G21_A22	OPN	OP01	58	0.44	OP01
23	3zjt_B_A22_C23	AAA	AA08	49	0.47	AA08
24	3zjt_B_C23_A24	AAA	AA00	66	0.22	AA00
25	3zjt_B_A24_C25	AAA	AA00	89	0.18	AA00
26	3zjt_B_C25_A26	AAA	AA00	63	0.30	AA00
27	3zjt_B_A26_A27	AAA	AA08	65	0.38	AA08
28	3zjt_B_A27_G28	AAA	AA08	62	0.32	AA08
29	3zjt_B_G28_G29	AAA	AA04	81	0.24	AA04
30	3zjt_B_G29_G30	AAA	AA00	55	0.27	AA00
31	3zjt_B_G30_G31	AAA	AA00	81	0.26	AA00
32	3zjt_B_A37_A38	AAA	AA08	79	0.25	AA08
33	3zjt_B_A38_U39	AAA	AA00	81	0.17	AA00
34	3zjt_B_U39_C40	AAA	AA08	39	0.42	AA08
35	3zjt_B_C40_C41	NAN	NANT	0	0.54	AA04
36	3zjt_B_C41_C42	NAN	NANT	0	0.69	AA10
37	3zjt_B_C42_U43	AAA	AA00	5	0.72	AA00
38	3zjt_B_U43_C44	NAN	NANT	0	0.63	AA06
39	3zjt_B_C44_G45	NAN	NANT	0	0.64	OP30
40	3zjt_B_G45_G46	AAA	AA00	75	0.21	AA00
41	3zjt_B_G46_C47	AAA	AA00	85	0.14	AA00
42	3zjt_B_C47.D_G47.E	NAN	NANT	0	0.33	ZZ1S
43	3zjt_B_C47.F_G47.G	AAA	AA00	76	0.17	AA00
44	3zjt_B_C47.H_U47.I	AAA	AA00	67	0.26	AA00
45	3zjt_B_C47_G47.A	AAA	AA00	86	0.13	AA00
46	3zjt_B_G47.A_U47.B	AAA	AA00	59	0.26	AA00
47	3zjt_B_G47.E_C47.F	NAN	NANT	0	0.48	AA05
48	3zjt_B_G47.G_C47.H	AAA	AA08	86	0.13	AA08
49	3zjt_B_G47.J_U48	ICL	IC02	74	0.38	IC02
50	3zjt_B_U47.B_U47.C	OPN	OP09	57	0.22	OP09
51	3zjt_B_U47.C_C47.D	OPN	OP20	52	0.42	OP20
52	3zjt_B_U47.I_G47.J	AAA	AA00	87	0.22	AA00
53	3zjt_B_U48_G49	NAN	NANT	0	1.39	OP05
54	3zjt_B_G49_C50	NAN	NANT	0	0.50	AA06
55	3zjt_B_C50_G51	AAA	AA00	63	0.30	AA00
56	3zjt_B_G51_G52	AAA	AA04	82	0.26	AA04
57	3zjt_B_G52_G53	AAA	AA00	76	0.21	AA00
58	3zjt_B_G53_U54	AAA	AA03	87	0.27	AA03
59	3zjt_B_U54_U55	AAA	AA04	78	0.35	AA04
60	3zjt_B_U55_C56	OPN	OP04	82	0.14	OP04
61	3zjt_B_C56_A57	AAA	AA00	65	0.33	AA00
62	3zjt_B_A57_A58	NAN	NANT	0	0.45	IC03
63	3zjt_B_A58_G59	NAN	NANT	0	0.39	OP25
64	3zjt_B_G59_U60	A-B	AB01	8	0.67	AB01
65	3zjt_B_U60_C61	OPN	OP12	72	0.19	OP12
66	3zjt_B_C61_C62	AAA	AA00	46	0.24	AA00
67	3zjt_B_C62_C63	NAN	NANT	0	0.38	AA04
68	3zjt_B_C63_G64	AAA	AA08	67	0.23	AA08
69	3zjt_B_G64_C65	AAw	AA01	68	0.34	AA01
70	3zjt_B_C65_U66	AAA	AA08	40	0.30	AA08
71	3zjt_B_U66_C67	AAA	AA00	82	0.20	AA00
72	3zjt_B_C67_C68	AAA	AA00	89	0.25	AA00
73	3zjt_B_C68_G69	AAA	AA04	72	0.33	AA04
74	3zjt_B_G69_G70	AAA	AA03	63	0.24	AA03
75	3zjt_B_G70_G71	AAw	AA06	46	0.30	AA06
76	3zjt_B_G71_U72	AAA	AA08	52	0.49	AA08
77	3zjt_B_U72_A73	NAN	NANT	0	0.62	AA03
78	3zjt_B_A73_C74	NAN	NANT	0	1.05	IC04
79	3zjt_B_C74_C75	NAN	NANT	0	0.53	OP20

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 79 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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