DNATCO v4.1: results

Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'- Deoxyguanosine, cesium soak

Results of the assignment of 130 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	3skw_A_GTP23_G24	AAA	AA08	16	0.34	AA08
002	3skw_A_G24_C25	AAA	AA08	74	0.12	AA08
003	3skw_A_C25_U26	AAA	AA03	93	0.20	AA03
004	3skw_A_U26_U27	AAA	AA08	54	0.34	AA08
005	3skw_A_U27_A28	AAA	AA00	87	0.14	AA00
006	3skw_A_A28_U29	AAA	AA00	88	0.15	AA00
007	3skw_A_U29_A30	AAw	AA01	69	0.29	AA01
008	3skw_A_A30_C31	NAN	NANT	0	0.95	OP04
009	3skw_A_C31_A32	NAN	NANT	0	1.15	ZZ2S
010	3skw_A_A32_G33	NAN	NANT	0	1.33	OP23
011	3skw_A_G33_G34	NAN	NANT	0	0.38	OP26
012	3skw_A_G34_G35	AAA	AA04	73	0.27	AA04
013	3skw_A_G35_U36	AAA	AA08	65	0.20	AA08
014	3skw_A_U36_A37	AAA	AA00	84	0.23	AA00
015	3skw_A_A37_G38	AAA	AA00	61	0.24	AA00
016	3skw_A_G38_C39	AAA	AA08	50	0.20	AA08
017	3skw_A_C39_A40	AAA	AA08	37	0.24	AA08
018	3skw_A_A40_U41	NAN	NANT	0	0.44	AB04
019	3skw_A_U41_A42	NAN	NANT	0	1.27	BB14
020	3skw_A_A42_A43	NAN	NANT	0	0.42	IC03
021	3skw_A_A43_U44	NAN	NANT	0	0.62	OP21
022	3skw_A_U44_G45	OPN	OP11	73	0.26	OP11
023	3skw_A_G45_G46	AAA	AA00	60	0.31	AA00
024	3skw_A_G46_G47	OPN	OP01	56	0.50	OP01
025	3skw_A_G47_C48	AAA	AA00	89	0.20	AA00
026	3skw_A_C48_U49	AAA	AA00	67	0.19	AA00
027	3skw_A_U49_A50	AAw	AA06	21	0.40	AA06
028	3skw_A_A50_C51	AAA	AA08	54	0.28	AA08
029	3skw_A_C51_U52	AAA	AA08	89	0.15	AA08
030	3skw_A_U52_G53	AAA	AA00	83	0.25	AA00
031	3skw_A_G53_A54	NAN	NANT	0	1.35	OP06
032	3skw_A_A54_C55	AAA	AA00	48	0.19	AA00
033	3skw_A_C55_C56	NAN	NANT	0	0.56	ZZ01
034	3skw_A_C56_C57	NAN	NANT	0	1.19	BB14
035	3skw_A_C57_C58	AAA	AA08	43	0.36	AA08
036	3skw_A_C58_G59	AAw	AA01	50	0.39	AA01
037	3skw_A_G59_C60	AAA	AA00	18	0.35	AA00
038	3skw_A_C60_C61	NAN	NANT	0	1.73	OP24
039	3skw_A_C61_U62	AAA	AA08	32	0.31	AA08
040	3skw_A_U62_U63	AAA	AA00	53	0.39	AA00
041	3skw_A_U63_C64	AAA	AA00	19	0.40	AA00
042	3skw_A_C64_A65	AAA	AA04	76	0.26	AA04
043	3skw_A_A65_A66	AAA	AA00	89	0.15	AA00
044	3skw_A_A66_A67	AAA	AA00	88	0.15	AA00
045	3skw_A_A67_C68	AAA	AA00	56	0.40	AA00
046	3skw_A_C68_C69	A-B	AB05	25	0.36	AB05
047	3skw_A_C69_U70	NAN	NANT	0	1.44	OP11
048	3skw_A_U70_A71	NAN	NANT	0	1.04	OP06
049	3skw_A_A71_U72	NAN	NANT	0	1.63	OP22
050	3skw_A_U72_U73	NAN	NANT	0	0.53	BA09
051	3skw_A_U73_U74	AAA	AA03	77	0.23	AA03
052	3skw_A_U74_G75	AAA	AA04	77	0.23	AA04
053	3skw_A_G75_G76	AAw	AA10	51	0.30	AA10
054	3skw_A_G76_A77	AAA	AA08	62	0.23	AA08
055	3skw_A_A77_G78	AAA	AA04	80	0.24	AA04
056	3skw_A_G78_A79	AAA	AA08	55	0.29	AA08
057	3skw_A_A79_C80	AAA	AA00	64	0.35	AA00
058	3skw_A_C80_U81	AAA	AA08	84	0.20	AA08
059	3skw_A_U81_A82	AAA	AA00	89	0.17	AA00
060	3skw_A_A82_U83	AAA	AA08	91	0.20	AA08
061	3skw_A_U83_A84	AAA	AA08	86	0.14	AA08
062	3skw_A_A84_A85	AAA	AA08	76	0.30	AA08
063	3skw_A_A85_G86	AAA	AA08	95	0.12	AA08
064	3skw_A_G86_U87	AAA	AA00	89	0.22	AA00
065	3skw_A_U87_CCC88	AAw	AA01	16	0.30	AA01
066	3skw_B_GTP23_G24	AAA	AA00	65	0.17	AA00
067	3skw_B_G24_C25	AAA	AA08	88	0.13	AA08
068	3skw_B_C25_U26	AAA	AA00	70	0.22	AA00
069	3skw_B_U26_U27	NAN	NANT	0	0.29	AA04
070	3skw_B_U27_A28	AAA	AA08	72	0.22	AA08
071	3skw_B_A28_U29	AAA	AA00	49	0.21	AA00
072	3skw_B_U29_A30	AAA	AA00	74	0.23	AA00
073	3skw_B_A30_C31	NAN	NANT	0	0.66	OP04
074	3skw_B_C31_A32	NAN	NANT	0	1.27	ZZ2S
075	3skw_B_A32_G33	NAN	NANT	0	1.39	IC04
076	3skw_B_G33_G34	OPN	OP07	42	0.56	OP07
077	3skw_B_G34_G35	AAA	AA04	70	0.33	AA04
078	3skw_B_G35_U36	AAw	AA10	35	0.40	AA10
079	3skw_B_U36_A37	NAN	NANT	0	0.44	AA08
080	3skw_B_A37_G38	AAA	AA00	66	0.18	AA00
081	3skw_B_G38_C39	AAA	AA00	85	0.19	AA00
082	3skw_B_C39_A40	AAA	AA08	51	0.36	AA08
083	3skw_B_A40_U41	NAN	NANT	0	0.58	AB04
084	3skw_B_U41_A42	NAN	NANT	0	1.92	OP12
085	3skw_B_A42_A43	NAN	NANT	0	0.53	IC04
086	3skw_B_A43_U44	NAN	NANT	0	1.34	OP09
087	3skw_B_U44_G45	NAN	NANT	0	0.83	OP11
088	3skw_B_G45_G46	NAN	NANT	0	0.35	AA03
089	3skw_B_G46_G47	OPN	OP01	25	0.31	OP01
090	3skw_B_G47_C48	AAA	AA08	31	0.37	AA08
091	3skw_B_C48_U49	AAA	AA00	50	0.29	AA00
092	3skw_B_U49_A50	NAN	NANT	0	0.31	AA04
093	3skw_B_A50_C51	AAA	AA08	78	0.21	AA08
094	3skw_B_C51_U52	AAA	AA00	64	0.26	AA00
095	3skw_B_U52_G53	AAA	AA00	41	0.26	AA00
096	3skw_B_G53_A54	NAN	NANT	0	0.75	OP05
097	3skw_B_A54_C55	AAA	AA00	61	0.25	AA00
098	3skw_B_C55_C56	NAN	NANT	0	1.56	AB04
099	3skw_B_C56_C57	NAN	NANT	0	1.36	BB14
100	3skw_B_C57_C58	NAN	NANT	0	0.72	AA04
101	3skw_B_C58_G59	AAw	AA01	10	0.46	AA01
102	3skw_B_G59_C60	AAA	AA08	64	0.22	AA08
103	3skw_B_C60_C61	NAN	NANT	0	1.65	OP24
104	3skw_B_C61_U62	AAA	AA04	26	0.61	AA04
105	3skw_B_U62_U63	AAw	AA05	14	0.63	AA05
106	3skw_B_U63_C64	AAA	AA00	69	0.20	AA00
107	3skw_B_C64_A65	AAw	AA10	26	0.50	AA10
108	3skw_B_A65_A66	NAN	NANT	0	0.60	AB04
109	3skw_B_A66_A67	NAN	NANT	0	0.32	AA10
110	3skw_B_A67_C68	NAN	NANT	0	0.36	AA10
111	3skw_B_C68_C69	NAN	NANT	0	0.52	AA03
112	3skw_B_C69_U70	NAN	NANT	0	1.34	OP17
113	3skw_B_U70_A71	NAN	NANT	0	0.44	OP06
114	3skw_B_A71_U72	NAN	NANT	0	0.82	OP06
115	3skw_B_U72_U73	NAN	NANT	0	0.79	BB03
116	3skw_B_U73_U74	NAN	NANT	0	0.34	AA10
117	3skw_B_U74_G75	AAA	AA08	71	0.35	AA08
118	3skw_B_G75_G76	AAu	AA12	60	0.34	AA12
119	3skw_B_G76_A77	AAw	AA10	67	0.34	AA10
120	3skw_B_A77_G78	AAA	AA04	60	0.42	AA04
121	3skw_B_G78_A79	AAA	AA00	33	0.23	AA00
122	3skw_B_A79_C80	AAA	AA00	24	0.34	AA00
123	3skw_B_C80_U81	AAA	AA08	41	0.23	AA08
124	3skw_B_U81_A82	AAA	AA08	39	0.28	AA08
125	3skw_B_A82_U83	AAA	AA08	87	0.16	AA08
126	3skw_B_U83_A84	AAA	AA00	90	0.16	AA00
127	3skw_B_A84_A85	AAA	AA00	79	0.16	AA00
128	3skw_B_A85_G86	AAA	AA04	88	0.16	AA04
129	3skw_B_G86_U87	AAA	AA00	75	0.33	AA00
130	3skw_B_U87_CCC88	NAN	NANT	0	0.34	AA06

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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N

Results of the assignment of 130 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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